Sequence of DPV Potato virus Y

Potato virus Y gene for polyprotein, partial cds.

ACC No: D12570

Dated: 2008-02-16 | Length: 1268 | CRC: -1098068475

                
ID   D12570; SV 1; linear; genomic RNA; STD; VRL; 1268 BP.
XX
AC   D12570; D01242;
XX
DT   14-JUL-1992 (Rel. 32, Created)
DT   16-FEB-2008 (Rel. 94, Last updated, Version 7)
XX
DE   Potato virus Y gene for polyprotein, partial cds.
XX
KW   .
XX
OS   Potato virus Y
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-1268
RA   Hidaka M.;
RT   ;
RL   Submitted (08-NOV-1991) to the EMBL/GenBank/DDBJ databases.
RL   Contact:Makoto Hidaka Faculty of Agriculture, The University of Tokyo,
RL   Department of Biotechnology; 1-1-1 Yayoi, Bunkyo-ku, Tokyo 113, Japan
XX
RN   [2]
RA   Hidaka M.;
RT   "Potato virus Y (PVY-T) coat protein gene";
RL   Unpublished.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .1268
FT                   /organism="Potato virus Y"
FT                   /strain="PVY-T"
FT                   /mol_type="genomic RNA"
FT                   /note="necrotic (PVY-T)"
FT                   /db_xref="taxon:12216"
FT   CDS             <1. .942
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /note="ORF"
FT                   /db_xref="GOA:Q85259"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:Q85259"
FT                   /protein_id="BAA02120.1"
FT                   /translation="PYIASMALKKLYMDRTVDEEELKAFTEMMVALDDEFECDTYEVHH
FT                   QGNDTIDAGGSTKKDAKQEQGSIQPNLNKEKEKDVNVGTSGTHTVTRIKAITSKMRMPK
FT                   SKGATVLNLEHLLEYAPQQIDISNTRATQSQFDTWYEAVQLAYDIGETEMPTVMNGLMV
FT                   WCIENGTSPNINGVWVMMDGDEQVEYPLKPIVENAKPTLRQIMAHFSDVAEAYIEMRNK
FT                   KEPYMPRYGLVRNLRDGSLARYAFDFYEVTSRTPVRAREAHIQMKAAALKSAQSRLFGL
FT                   DGGISTQEENTERHTTEDVSPSMHTLLGVKNM"
FT   mat_peptide     139. .939
FT                   /product="coat protein"
XX
SQ   Sequence 1268 BP; 397 A; 220 C; 307 G; 344 T; 0 other;

d12570 Length: 1268  16-FEB-2008  Type: N  Check: 3689  ..

       1  ccatacatag cgagcatggc attgaagaag ctgtacatgg ataggacagt
      51  agatgaggag gaactgaaag ctttcactga aatgatggtt gccttggatg
     101  atgaatttga gtgcgatact tatgaagtgc accatcaagg aaatgacaca
     151  atcgatgcag gaggaagcac taagaaagat gcaaaacaag agcaaggtag
     201  cattcaacca aatctcaaca aggaaaagga aaaggacgtg aatgttggaa
     251  catctggaac tcacactgtg acacgaatta aagctatcac gtccaaaatg
     301  agaatgccca agagtaaggg tgcaactgta ctaaatttgg aacacttact
     351  cgagtatgct ccacagcaaa ttgacatctc aaatactcga gcaactcaat
     401  cacagtttga tacatggtat gaagcagtac aacttgcata cgacatagga
     451  gaaactgaaa tgccaactgt gatgaatggg cttatggttt ggtgcattga
     501  aaatggaacc tcgccaaata tcaatggagt ttgggttatg atggatggag
     551  atgaacaagt cgaataccca ctgaaaccaa tcgttgagaa tgcaaaacca
     601  acacttaggc aaatcatggc acatttctca gatgttgcag aagcgtatat
     651  agaaatgcgc aacaagaagg aaccatatat gccacgatat ggtttagttc
     701  gtaatctgcg cgatggaagt ttggctcgct atgcttttga cttttatgaa
     751  gttacatcac ggacaccagt gagggctaga gaggcacaca ttcaaatgaa
     801  ggccgcagct ttaaaatcag ctcaatctcg acttttcgga ttggatggtg
     851  gcattagtac acaagaggaa aacacagaga ggcacaccac cgaggatgtt
     901  tctccaagta tgcatactct acttggagtg aagaacatgt gattgtagtg
     951  tctttccgga cgatatatag atatttatgt ttgcagtaag tattttggct
    1001  tttcctgtac tacttttatc gtaattaata atcgtttgaa tattactggc
    1051  agataggggt ggtatagcga ttccgtcgtt gcagtgacct tagctgtcgt
    1101  ttctgtatta ttatgtttgt ataaaagtgc cgggttgttg ttgttgtggc
    1151  tgatctatcg attaggtgat gttgcgattc gtcgtagcag tgactatgtc
    1201  tggatttagt tacttgggtg atgctgtgat tctgtcatag cagtggctgt
    1251  aaacttcaat caggagac