Sequence of DPV Nilaparvata lugens reovirus
Nilaparvata lugens reovirus genome segment S4, complete sequence.
ACC No: D49696
Dated: 2006-09-22 | Length: 3560 | CRC: 1013215378
ID D49696; SV 1; linear; genomic RNA; STD; VRL; 3560 BP.
XX
AC D49696;
XX
DT 24-MAR-1995 (Rel. 43, Created)
DT 22-SEP-2006 (Rel. 89, Last updated, Version 9)
XX
DE Nilaparvata lugens reovirus genome segment S4, complete sequence.
XX
KW .
XX
OS Nilaparvata lugens reovirus
OC Viruses; dsRNA viruses; Reoviridae; Fijivirus.
XX
RN [1]
RP 1-3560
RA Nakashima N.;
RT ;
RL Submitted (14-MAR-1995) to the EMBL/GenBank/DDBJ databases.
RL Nobuhiko Nakashima, National Institute of Sericultural and Entomological
RL Science; 1-2 Owashi, Tsukuba, Ibaraki 305, JAPAN (Tel:81-298-38-6109,
RL Fax:81-298-38-6028)
XX
RN [2]
RP 1-3560
RA Nakashima N., Noda H.;
RT "Nucleotide and deduced amino acid sequences of Nilaparvata lugens
RT reovirus; a putative member of the genus Fijivirus";
RL Unpublished.
XX
RN [3]
RP 1-5, 20-96
RX PUBMED; 8558122.
RA Nakashima N., Koizumi M., Watanabe H., Hiroaki N.;
RT "Complete nucleotide sequence of the Nilaparvata lugens reovirus: a
RT putative member of the genus Fijivirus";
RL J. Gen. Virol. 77:139-146(1996).
XX
FH Key Location/Qualifiers
FH
FT source 1. .3560
FT /organism="Nilaparvata lugens reovirus"
FT /segment="S4"
FT /strain="Izumo"
FT /mol_type="genomic RNA"
FT /db_xref="taxon:33724"
FT CDS 76. .3474
FT /codon_start=1
FT /product="130KD protein"
FT /db_xref="UniProtKB/TrEMBL:Q83861"
FT /protein_id="BAA08545.1"
FT /translation="MTEYKPILYPFIGKIDDSRSDLHLTVGDFIDRLKNGNVLRIITKP
FT NEDYIVKYDGIYTYLFCTIKDLTTYYLNVHNVDILNDPIYQAKEITAPRLDPTGKKMNL
FT YQFKNGVECFVPLKMCNSDISIRMCFLSTFVRNAILSYLPRSSDKLNEYINLFCFFYNV
FT SLIFSGKLNMTCFNLEKWTSFRPCHNEPDGLLDPMFNTIRLTSKQFIITKVNSDDRTMI
FT KSSNMEAYHNDIRYGISYDIWWFHGNVNTQQIKQMWNKSLCNKFAVMHVFHTFNVSHIH
FT VFNNAISLLKYYCYCLYRTYQAQHRFQNSSGIVNSDRRGFYGLLLNKRAMDYICNTFKF
FT NPQCLFGIPMIFSNIVNVPTEIFTFMDMMKMIYQRIAIPRFLDLVNDSRPFVYSSMYKL
FT LEKVAGKYNFITTLYSEVFEVDDPDVTLNNVQDIDVPTVEPITITEYSYTDKITKLFPP
FT AFYNCQMNLDNVRTNYMYDKFHYDCVIDFDFADSRVVVDTDEKVFSNFRTNYGITKACR
FT DTFEENVKPENIAQKYLNQTFNTVMSPIDRLFYSGYVYDFVPNYRFDNGVLDVTGSDLL
FT SEKFNQVNNSTFKLYALFWKYAVMPRQTILTDRVSVGFMGAITEPNVHIFQNVSRNAWR
FT VFGIGADARGRCYRSDINSPLGMDSVDYVISDMDLAITTGIDVDACTQHAVTLFTNIYH
FT MTSVMGIFKIEYCLSKVIKALCDIPNCKYRLVKSVGSRPGSIEVFIVFWKKLPKDMVMT
FT MDKARVIMSINSLIGDSWKPLHQVDCLQHTKIMGGHPDALSCALMAYYADEENIQDLIS
FT YVSTFCGFTKIGRFGRDLSNTKSGLVYGITSLDRLSLFARDPIFYQYSNLLHSTLKLNG
FT TIKADFIKIEGISPITSFTNAQRYQLSNVHSDIMDKTDNQFGACIRDIGCRNFHGVIFA
FT RRERFEYIGYDTDPRLKNPQRNVQVQVMNVSYGDVVNMLASPCSVIVYNSLFMTYNSNK
FT KLYDDIKTVIGSVKKDSCLVFSVYVCDEVSPDAVVAHSIGSKHVTNVDGYNQINLSLGS
FT YAPVATLTPEQYDDLVTRKYDNAPSISQIMVSKSDLYYGALAYGRFPNGEADYLLPLLN
FT TVQRSLIVSSSNTNVGSVMHSVIIE"
XX
SQ Sequence 3560 BP; 1143 A; 563 C; 641 G; 1213 T; 0 other;
d49696 Length: 3560 22-SEP-2006 Type: N Check: 1079 ..
1 agtttgtagt gactattata taagattact taatgccttc gtatttgaat
51 ataatagaaa tactgctcaa taaacatgac agaatataaa ccaattttgt
101 atccattcat aggtaaaata gatgactcaa gatcagattt gcatttaacg
151 gtaggagatt ttatagacag attaaagaat gggaatgttt taaggataat
201 aactaaacca aacgaagatt atatcgtaaa gtatgatggt atttatacat
251 accttttctg tacaatcaag gatttaacaa catactatct taatgtacac
301 aatgtagata ttctcaatga tccaatatac caagcaaaag agataaccgc
351 cccaagactt gatcctactg gtaagaaaat gaatttgtat caattcaaga
401 atggtgtcga atgctttgtg ccgcttaaaa tgtgtaattc agatatctct
451 attagaatgt gtttcttatc aacgtttgtc aggaacgcaa tccttagtta
501 tttaccgcgc agttcagata agttaaacga gtatataaat cttttttgtt
551 tcttttacaa tgttagtcta atcttcagtg gaaaattgaa tatgacttgt
601 tttaatttgg aaaaatggac atcttttcgg ccttgtcaca acgaaccaga
651 cggtttatta gatccaatgt ttaatacaat acgtctaacg tctaaacaat
701 ttattataac gaaagttaat tcagatgacc gtactatgat taaatcatcg
751 aacatggaag cctatcataa tgatattcgt tatgggatat cgtatgatat
801 ttggtggttc catggtaacg taaatactca gcaaataaaa caaatgtgga
851 acaagtcatt atgcaataag ttcgctgtta tgcacgtttt tcatactttc
901 aacgtatcac atattcacgt atttaataat gcaatttctc tcttaaaata
951 ctactgttac tgtttatatc gtacgtatca agcacagcat aggtttcaaa
1001 actcatctgg aatagtgaat agtgatagac gtggttttta cggcttatta
1051 ttgaataaac gagcaatgga ttacatatgt aatactttta agtttaaccc
1101 tcaatgttta ttcggtatac caatgatttt ttctaatatt gttaatgtac
1151 cgactgaaat ttttacgttc atggacatga tgaaaatgat atatcaaaga
1201 attgctatcc cacgcttttt agatttagtt aatgactctc gtccttttgt
1251 gtattcttct atgtataaac ttttggaaaa ggtggctggt aaatataact
1301 ttataactac actatatagt gaagtgtttg aagttgacga tcctgatgtg
1351 actctcaata atgttcagga tattgatgta ccaactgttg aacctattac
1401 catcactgaa tattcatata ctgataaaat tactaaacta tttcctcctg
1451 ctttttacaa ttgtcaaatg aatcttgaca atgtacgaac taattacatg
1501 tatgataaat ttcattacga ctgtgttatt gattttgatt ttgcggattc
1551 aagggtggtg gttgatactg atgagaaagt cttttcaaat tttagaacaa
1601 actatggtat aactaaagct tgtcgtgaca catttgaaga aaatgtgaaa
1651 cctgaaaata tcgctcaaaa atatttaaac caaacgttta atacagtaat
1701 gagtcctatt gatcgattat tctatagtgg atatgtctat gattttgtac
1751 ctaattatag gtttgacaat ggggtcttag acgttactgg ttcagacctc
1801 ctttctgaga aattcaatca agttaataat tcaacgttta aattgtatgc
1851 tttattttgg aaatacgctg ttatgccaag acaaactatc ctgactgatc
1901 gtgttagtgt cggattcatg ggagccataa ctgagcctaa tgtacacatt
1951 tttcagaacg tttcacgcaa cgcctggcga gtattcggta taggggcaga
2001 tgcgagagga cgatgttatc gttcagacat aaattcacct ttgggcatgg
2051 attcggtcga ttatgtcata tcagacatgg atttagcaat tacaactggt
2101 atagatgttg acgcttgcac acaacacgct gttactcttt tcaccaatat
2151 ctaccacatg acgtcagtta tggggatatt caagatagaa tattgtttat
2201 ccaaagttat aaaagcttta tgtgatattc caaattgtaa gtaccgtctc
2251 gtaaaaagtg ttgggagtcg gcctggtagt attgaagtat ttatcgtgtt
2301 ctggaaaaaa ctacctaaag atatggtcat gacgatggat aaggctagag
2351 ttatcatgtc tatcaattca cttattggtg attcatggaa acccctccat
2401 caagtagatt gtttgcaaca tacaaaaatt atgggtggac accctgacgc
2451 cttaagttgt gctcttatgg catactatgc tgacgaagag aatatacagg
2501 atttgatatc atatgtgagt actttttgtg ggtttactaa gattggtaga
2551 ttcggacgtg atcttagtaa tacgaagagc ggactcgtct atggtatcac
2601 ttctcttgac agattgtctc tctttgcacg tgatccaatt ttctatcaat
2651 attctaattt actacactct actcttaagt tgaatggaac cattaaagct
2701 gattttatta aaatagaagg tatatcacca atcacatcat ttactaatgc
2751 tcaacgatac cagttatcta acgttcattc tgacataatg gataaaactg
2801 acaatcaatt tggtgcatgt attagagata taggttgccg aaatttccat
2851 ggtgtcatat ttgctagacg tgagcggttt gaatatattg gatatgatac
2901 tgatcctaga ttgaaaaacc cacaacgtaa tgttcaagtc caagtgatga
2951 atgtaagtta tggtgatgtt gttaatatgc ttgctagtcc atgtagtgtt
3001 attgtttata attctttatt tatgacgtat aacagtaata aaaaactata
3051 cgatgatata aaaactgtta ttggatctgt taaaaaggat tcttgtctag
3101 ttttcagtgt ttatgtttgt gatgaggtga gtcctgatgc agtcgttgcc
3151 cattcaatag gttcaaaaca tgttactaat gtagatgggt ataaccagat
3201 aaatttatca ctaggaagtt atgcaccagt tgctactctc acccctgaac
3251 aatacgatga tttggttacc cgcaaatatg acaatgcacc atccatttct
3301 caaatcatgg ttagtaaaag tgatttatac tatggagcgt tggcatatgg
3351 gcgatttcct aatggcgaag ctgattatct cctaccttta ttgaatacag
3401 ttcaacgatc actgatagtt tcatccagta ataccaatgt aggtagcgta
3451 atgcattctg taataattga gtagttattt ctagtaaata tagtaatacg
3501 gatgggcata gtaaacgtaa gaacagagtc caactgttaa cgtagtcact
3551 cgcagttgtc