Sequence of DPV Satsuma dwarf virus

Citrus mosaic sadwavirus gene for polyprotein, partial cds.

ACC No: D64079

Dated: 2009-01-27 | Length: 2201 | CRC: -1185276479

                
ID   D64079; SV 1; linear; genomic RNA; STD; VRL; 2201 BP.
XX
AC   D64079;
XX
DT   21-JAN-1997 (Rel. 50, Created)
DT   27-JAN-2009 (Rel. 99, Last updated, Version 5)
XX
DE   Citrus mosaic sadwavirus gene for polyprotein, partial cds.
XX
KW   .
XX
OS   Citrus mosaic sadwavirus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Picornavirales;
OC   Sadwavirus.
XX
RN   [1]
RP   1-2201
RA   Iwanami T.;
RT   ;
RL   Submitted (07-SEP-1995) to the EMBL/GenBank/DDBJ databases.
RL   Contact:Toru Iwanami Fruit Tree Research Station, MAFF, Okitsu Branch;
RL   Okitsu, Shimizu, Shizuoka 424-02, Japan
XX
RN   [2]
RP   1-2201
RA   Iwanami T., Ieki H.;
RT   "Nucleotide sequence of the coat protein genes of citrus mosaic virus";
RL   Unpublished.
XX
RN   [3]
RA   Iwanami T., Ieki H.;
RT   "Nucleotide sequence of the coat protein genes of citrus mosaic virus";
RL   Virus Res. 42:181-186(1996).
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .2201
FT                   /organism="Citrus mosaic sadwavirus"
FT                   /host="Citrus unshu (satsuma mandarin)"
FT                   /mol_type="genomic RNA"
FT                   /note="Citrus mosaic virus may be a tentative member of
FT                   genus Nepovirus"
FT                   /note="synonym: Citrus mosaic virus"
FT                   /db_xref="taxon:57325"
FT   CDS             <1. .1989
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /note="including coat proteins"
FT                   /db_xref="UniProtKB/TrEMBL:P89940"
FT                   /protein_id="BAA10961.1"
FT                   /translation="GSAFQRGFTEFSERNENKIEHLFVPSMHGLSLKEDIHLFTKNLEI
FT                   PSTADFCKELVRYKVMAEAVNYRSASYYSRLLSGVAILRPHFKFTCRLVTPILESIPLL
FT                   IVWDDLSELTSKVARLSAAFEIIDSDHTRAAVYEVRPSGPTDLLTPSKANYGMGGDLVI
FT                   FSGGYGSSSLSSPLRLKIEASLLKDSQLGSGEVGVPQGPSSMLSFHYLNEVDLGDVNLY
FT                   TFLGSCKYDSKSVVNSRKYISICPAAGLVHNKGKAAYLGLTASLFSMYNFWKGSYILKV
FT                   DVLSKGSCAGAISIYVPPPGTSADHYSQSQLDTLPRYELPWRGSGSARFEVENFSWIGW
FT                   HLTKPQRFVTNEDWFSLNAGVVVVLNQPPTTRTGGSSDIRVIFRIVKFKNLTLKERSTT
FT                   CDIFAGIKDASYTSPLLDVLDNTISAPASVASEPDVGLDASSSVQTNDMLPRSFGAYYA
FT                   YLLGGAVPGKRWHSYVLPITMGHHRSEIGTTKTGYLNEELDDAVRYKVFVAQSIAYFMR
FT                   RGAFYAADLLFTLVIDGDFTSERAFAQLGLIQTPLMEYYEGYSTDRTLSSEGGCSNQLG
FT                   VGKSYIQLLVPRRNYRARSVTTYTSVLFFETIGSLSIRFTVSDKIKGVHLFVEAVGPID
FT                   IDGYGRGLNVGFTDESFVLMPSLRTAA"
XX
SQ   Sequence 2201 BP; 561 A; 439 C; 499 G; 702 T; 0 other;

d64079 Length: 2201  27-JAN-2009  Type: N  Check: 6647  ..

       1  ggctctgcct tccagagagg atttacagaa ttttctgaaa ggaatgagaa
      51  taagatagaa catcttttcg ttccttctat gcatggtctc tcactcaagg
     101  aagatatcca cttgtttact aaaaaccttg agataccttc taccgccgat
     151  ttctgcaaag agttggttag gtataaggtt atggcagagg ccgtgaatta
     201  taggagtgcc agctactact cgcgcctatt gtctggggta gcaattttgc
     251  gaccccattt caaatttacc tgtaggctag taactccaat tctggaatcc
     301  atacctctac ttatagtttg ggatgatctt tcagagttaa catctaaagt
     351  tgcccgacta tctgcagcct ttgaaatcat tgattcagat cacactcgag
     401  ctgctgttta tgaggttcgt ccatcgggac caactgacct gttgacccct
     451  tcaaaagcca attacggtat ggggggcgat cttgttatct tttctggtgg
     501  ttatggttct tcttctctat cttcgccttt aagacttaaa atcgaagcga
     551  gtcttttaaa agattcgcag ttgggttcag gtgaggttgg agtgcctcaa
     601  ggtccgtcat ctatgttatc atttcattat cttaatgagg tggaccttgg
     651  ggatgtaaat ttgtatactt tcctaggtag ttgtaaatac gattctaaat
     701  cagttgtaaa tagtaggaaa tatatttcta tttgtccggc agctggtctt
     751  gtacataata aaggaaaagc tgcttattta ggattaacgg cttctctttt
     801  ttccatgtat aatttttgga agggaagtta tattttaaag gtggacgttc
     851  tttccaaggg gagttgtgct ggagctatta gcatatatgt gcccccacca
     901  ggcacaagcg ctgatcacta ctctcaatca caattagata ccctcccacg
     951  ttatgaattg ccatggaggg gatcgggatc tgccaggttc gaggttgaaa
    1001  atttttcctg gattggttgg cacttaacca aaccccagcg ttttgtgacc
    1051  aatgaagatt ggttttcgtt gaatgctggg gtggttgtgg tgctaaacca
    1101  gccaccaaca acaagaactg gtggatcaag tgatataaga gtgatatttc
    1151  gtattgttaa atttaagaat ctcactctta aggaacgatc cacaacctgc
    1201  gatatatttg caggtataaa agatgcgtcg tacacttcac cgcttttaga
    1251  tgtgcttgat aatactatat cggcaccagc ttcagtcgca tctgaaccag
    1301  atgttgggtt ggacgctagc tctagtgttc aaaccaatga tatgctccca
    1351  cgatcgtttg gcgcatacta tgcctattta ttgggtggag cagtacctgg
    1401  gaaaaggtgg cactcgtatg tgctgcccat aacaatggga caccacagaa
    1451  gtgaaatcgg cactacaaag actgggtatc taaatgaaga acttgacgat
    1501  gcagtcaggt ataaggtatt cgttgcgcaa tccattgcat attttatgcg
    1551  caggggggcc ttttatgccg ccgacctcct tttcactcta gtaattgatg
    1601  gagatttcac ttccgaacgt gctttcgctc agcttggatt gatccaaact
    1651  cccttgatgg agtactatga gggatattct accgatagga ctctttcgtc
    1701  cgaaggggga tgttccaacc aactaggcgt gggcaaatca tatattcaat
    1751  tacttgtccc gaggagaaac tatagggcta gatctgttac aacgtatact
    1801  tctgttctat tctttgaaac gattggttcc ctttcgatac gatttactgt
    1851  aagtgataaa atcaaagggg ttcacctatt tgttgaagca gtaggcccta
    1901  ttgatattga tgggtatggg agaggactta atgttggatt taccgatgaa
    1951  tccttcgttt taatgccctc actccgtaca gccgcttaag agtggcatta
    2001  ggtgatgccc accggacctt aacgtgggtt tacatgtaaa tactagtgtg
    2051  tatttcctgt ttgtttgttt tgtttgtttt cttaaaataa actggatttc
    2101  aaaaagggtt tctcaaactc ttccctttcc gatccaggag tttcgcgtgt
    2151  ttttcttgat ttctgtcgcg tgcggttacg accagtgaaa gtctggtggc
    2201  c