Sequence of DPV Barley yellow dwarf virus-PAV
Barley yellow dwarf virus-PAV genomic RNA, complete genome.
ACC No: D85783
Dated: 2009-02-20 | Length: 5667 | CRC: -532889042
ID D85783; SV 1; linear; genomic RNA; STD; VRL; 5667 BP.
XX
AC D85783;
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DT 28-JUN-1996 (Rel. 48, Created)
DT 20-FEB-2009 (Rel. 99, Last updated, Version 10)
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DE Barley yellow dwarf virus-PAV genomic RNA, complete genome.
XX
KW .
XX
OS Barley yellow dwarf virus-PAV
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Luteoviridae;
OC Luteovirus.
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RN [1]
RP 1-5667
RA Sano Y.;
RT ;
RL Submitted (05-JUN-1996) to the EMBL/GenBank/DDBJ databases.
RL Contact:Yoshitaka Sano Graduate School of Science & Technology, Niigata
RL University, Course of Biosystem Science; 2-8050 Ikarashi, Niigata, Niigata
RL 950-21, Japan
XX
RN [2]
RA Sano Y., Tanno F., Kato Y., Matsubara A., Kojima M.;
RT "Complete nucleotide sequence of the Japanese isolate of barley yellow
RT dwarf virus-PAV serotype";
RL Nippon Shokubutsu Byori Gakkaiho 62:566-571(1996).
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DR RFAM; RF00434; BTE.
XX
FH Key Location/Qualifiers
FH
FT source 1. .5667
FT /organism="Barley yellow dwarf virus-PAV"
FT /lab_host="Hordeum vulgare"
FT /strain="BYDV PAV serotype"
FT /isolate="BYDV JPN-PAV"
FT /mol_type="genomic RNA"
FT /dev_stage="seedling"
FT /cell_type="sieve element"
FT /tissue_type="phloem"
FT /db_xref="taxon:12040"
FT misc_feature 1. .5667
FT /note="complete genome including six major ORFs."
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SQ Sequence 5667 BP; 1671 A; 1370 C; 1388 G; 1238 T; 0 other;
d85783 Length: 5667 20-FEB-2009 Type: N Check: 4490 ..
1 agtgaagatt gaccatctca caaaagctgt tacgtgcttg taacacacta
51 cacactcgtt ttgtgttcga gaagtagttg caacaacggt ccccttattg
101 cctgacaagc tgagggccac ccttctatcc ccgccgccat catgttcttc
151 gaaatactta taggagctag cgctaaggcg gtaaaagact tcatcagtca
201 ttgttattct cgtttgaaat ctatatatta ctcttttaaa cgatggctga
251 tggagatatc tgggcagttt caggcccatg acgcctttgt caacttgtgc
301 ttcgggcaca tggctgacat tgaagacttc gaggcagagc tcgctgaaga
351 gttcgccgag agggaggacg aggtggaaga ggcaaggagc ctcttgaaac
401 tgctggtcgc ccaaaaatct aaaactgggg tgaccgaggc ttggaccgac
451 ttctttacga agtcgagagg tggcgtctac gcgccgcttt cctgcgagcc
501 taccaggcag gagttagaag tcaagagcca aaagctcgaa aaacttctag
551 aagaacagca ccaattcgag gtgcgagcgg ctaagaaata catcagggaa
601 aagggccgcg gcttcatcaa ctgttggaac gacttgcgaa gtcgtctcag
651 gctggtgaag gacgtcaggg acgaggcgaa ggacaacgcc agagctgctg
701 ccaagatcgg agcagaaatg ttcgcacccg ttgacgtgca ggacctctac
751 agtttcacag aggtcaagaa ggtggagacc ggcctcatga aggaggtcgt
801 gaaagagaga aacggcgaag aagagaaaca cctcgagccc atcatggaag
851 aggtgagatc tatcaaggat accgccgaag ccagggacgc cgcctccact
901 tggataacag agacagttaa gctgaagaac tcaacgctta acgcagatga
951 attgtctctg gccaccatcg ctcgctacgt tgaaaacgtg ggggacaaat
1001 tcaaactcga cattgctagc aagacgtatc taaagcaagt cgcatcgatg
1051 tctgtaccaa taccaactaa caaggacatc aaattgaaga tggtgctgca
1101 gagtcctgaa gcacgtgcca ggcgggaacg catggacgtg cttgactctg
1151 tgggttttta gaggggctct gtaccgcctc tggttttgag agcccattcc
1201 ccattctcgg gctgcctgag attgcggtca cagacggagc ccgactccgt
1251 aaggttagta gtaatattag ataccttagc caaacccacc taggtcttgt
1301 ctataaggca ccaaatgcct ctctgcacaa cgcgcttgta gcagtggaga
1351 gaagagtttt tacagtagga aagggggaca aagcaatcta ccccccccgc
1401 ccggagcatg acattttcac tgatacgatg gattacttcc agaaatccat
1451 tatagaagag gtgggatact gtaaaacata tccagcgcaa ctcctggcta
1501 atagctatag cgcaggaaag agggccatgt accacaaagc cattgcatcc
1551 ttgaaaactg tcccttatca tcagaaggat gccaacgtgc aagctttcct
1601 gaagaaggag aaacattgga tgaccaagga catcgccccc cgattgattt
1651 gcccccgcag taagcggtac aatattatcc taggaactcg tttgaaattc
1701 aacgagaaga agatcatgca cgccatcgat agtgtgtttg gatcccccac
1751 tgtgctttct ggttatgaca actttaaaca aggaagaatc atagccaaaa
1801 agtggcaaaa gtttgcatgc cccgtcgcca tcggcgtgga tgctagccgc
1851 tttgaccaac atgtgtcaga gcaggcgctt aagtgggaac acgggatata
1901 caatggaatc ttcggagaca gcgaactggc ccttgcactt gaacatcaaa
1951 ttaccaacaa catcaagatg tttgttgaag ataaaatgct taggttcaag
2001 gtaagaggcc acagaatgtc cggtgacatt aataccagca tgggaaataa
2051 gctcataatg tgcggcatga tgcacgcata tttcaagaag ctgggtgttg
2101 aagctgaact atgcaacaac ggagacgact gtgtcatcat cactgataga
2151 gccaatgaga agctctttga tggcatgtac gaccatttcc tccagtatgg
2201 cttcaacatg gtgaccgaaa aaccagtcta cgaactggaa caattggagt
2251 tttgccagtc aaaaccggtc tctgttaatg gaaagtatag aatggtcaga
2301 aggcccgata gcataggcaa agatagcaca acactgctga gcatgctcaa
2351 tcaatccgac gtcaagagct acatgtcggc tgtcgctcag tgtggtttgg
2401 tgctcaacgc tggagtaccc atacttgaaa gtttctataa atgcctatat
2451 agaagctcgg ggtacaaaaa agtgagtgag gaatttatta aaaacgtcat
2501 atcgtatgga acagatgaga gactacaagg tagacgtacc tataatgaaa
2551 cacctatcac aaaccacagt agaatgtcct actgggaatc attcggagtt
2601 gaccctaaga tacagcaaat cgtcgagagg tactacgacg gtcttacggt
2651 aagtgcccaa ctccagagcg tgaaggtgac gactccacat ctgcaatcaa
2701 tactactttc cataccggaa aaccactcac aaaacgaata ttaattacca
2751 aatcttagct gggtttggga tagggttcat agttagtata ccctgtacat
2801 tagctctcgc gtactttatt tataataaag tttcagacac cactagagag
2851 gtggtgaatg aattcagtag gccgtagagg acctagacgc gtaaatcaaa
2901 atggcacaag aaggaggcgc cgtagaacag ttcggccagt ggttgtggtc
2951 caacccaatc gagcaggacc cagacgacga aatggtcgac gcaagggaag
3001 aggaggggca aatcctgtat ttagaccaac aggcgggact gaggtattcg
3051 tattctcagt cgacaacctt aaagccaact cttccggggc aatcaaattc
3101 ggccccagtc tatcgcaatg cccagcgctt tcagacggaa tacttaagtc
3151 ctaccaccgt tacaagatca caagtatccg tgttgagttt aagtcacacg
3201 cgtccgcaac cacggccggc gctatcttta ttgaactcga caccgcgtgc
3251 aaacaatcag ccctcgctag ctacattaat tccttcacaa tcagcaagac
3301 cgcctcaaag gtcttcagag ccgaagcgat taacgggaag gaattccagg
3351 aatcaacgat agaccagttt tggatgctct acaaggccaa tggaactacc
3401 actgagacgg caggacaatt cattatcacg atgagtgtca gtttgatgac
3451 ggccaaatag gtaaactcct caacaccgga accgaaacct gcaccagaac
3501 ccacaccaac cccacagccc acgccagctc cacagcccgc acccgaaccg
3551 actcctgcac cagtccccaa aagattcttt gagtatatcg gcactccaac
3601 cggtacaatc tcaacaagag agaactctga cagtatttct gtcagcaagc
3651 tcggtggaca gtcgatgcag tacatagaga atgagaagtg tgaaacaaag
3701 gtcattgact ccttctggag cactaacaac aacgtgtctg cacaggcagc
3751 cttcgtttac ccagtgccag aaggatcata cagtgtgaac atttcgtgcg
3801 aaggctttca atccgttgac cacataggag gcaacgagga tggctattgg
3851 attggtttaa ttgcctactc caattcgtca ggagacaatt ggggggtagg
3901 caactacaaa gggtgtagtt tcaagaactt cttggcaacc aacacttgga
3951 gaccaggcca taaggatctc aagttgaatg attgccagtt cacagatgga
4001 caaatagttg agagggatgc cgtgatgtct ttccacgtgg aagcaacagg
4051 tactgatgcc tgtttctatc tcatggctcc caaaacaatg aaaactgaca
4101 aatacaacta tgttgtctca tatggagggt acacaaacaa acggatggag
4151 tttggtacca tatctgtgac atgtgatgaa tccgatgttg aggcagagcg
4201 cataacaagg cacgctgaaa cacccatacg ttccaagcac attcttgtgt
4251 ccgaacagta tgagcaacct ttacccacca taatcgatca aggcttgtgt
4301 gatgtgcaaa ctcccgagca agaacaaaca ctggtggatg aagaagacaa
4351 acagactgtt tccacagaac ctgatatagc actcatggaa tatgaagctg
4401 caacagccga aattccggat gctgaagagg atgttttgcc ctccaaggaa
4451 cagctgtctt ctaaaccggt ggacacgtcc ggcaacagaa tacctaagcc
4501 caaggaacct gaagtacttg gaacatacca gggacagaat atttaccctg
4551 aagacgtgcc accaagcgcg cggcaaaagc tacgcgaagc cgcaaatgca
4601 ccctccacat tactctacgg gaaaacttcc aataagagca agaatttctt
4651 gactcgtttt gtggaggcga ataggtcccc tacaactcca gctgccccaa
4701 cagtgtcaac tgcatcaaac atgacaaggg agcagcttgc ggagtacact
4751 agaattagga gatcccttgg actcacagca gcgaaggaat acagggcgca
4801 atttcagtga aggcaacacc actagcacaa atcggatcct gggaaacagg
4851 cagaactacg gttcataagc tcgggtaggc tgtcaaccta ccgccgtatc
4901 gtattgtgtt tggccgatgg atgacctcca cgttatcgcc gtttgtattt
4951 ttgctctaac tgtgttgaca gggttaggcg cggcaatcgg ctgttgtgcc
5001 ggttgcattc cccctcctcc ctcctcccgc acttctgttt aagcaaaaat
5051 ctctcggtct gtgcgaaaga aactcaaaaa tatcggggag cttcggctca
5101 gtgaggggat taaccacccc cagtaaaggc tggtcttggc ggacttgaat
5151 aacccggtat aagacgaagt ggtaaccgcc cactgatcaa atggtgaaca
5201 tgcttctgtg ttatacactg ccccggagcc taccgggtca acaaggctat
5251 tccaccagct caatgaaatg agagtggagt ggacggagtg ggtgacttcg
5301 agatgtacac ccgatcgtca ggattgaaga cgttaaaact cgacgaccta
5351 gtgcaagtcg ttaaactgac tagggtggat acaccacacc cggcctaact
5401 tgtaggcata cccacgatac gaaacgtggg tctcttggag ccactacctg
5451 tgatgcaagg tagggtatga gtcttagcaa gctctgtgcc aggagatgga
5501 cataaaccat agcaatcctg caagtcatct tggcgaacta taggtgaacc
5551 gtgccacggg cctgcctacc gaaaggaaaa gcagtatcca acacagcaat
5601 gtgttggggg ttacaccctt cggggtactc tttaacgctg acactcgaaa
5651 gagcagttcg gcaaccc