Sequence of DPV Wheat yellow mosaic virus
Wheat yellow mosaic virus genomic RNA, complete sequence of RNA1.
ACC No: D86634
Dated: 2003-07-07 | Length: 7636 | CRC: 1158431438
!!NA_SEQUENCE 1.0
ID D86634 standard; RNA; VRL; 7636 BP.
XX
AC D86634;
XX
SV D86634.1
XX
DT 11-JUN-1998 (Rel. 56, Created)
DT 07-JUL-2003 (Rel. 76, Last updated, Version 4)
XX
DE Wheat yellow mosaic virus genomic RNA, complete sequence of RNA1 .
XX
KW .
XX
OS Wheat yellow mosaic virus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC Bymovirus.
XX
RN [1]
RP 1-7636
RA Namba S.;
RT ;
RL Submitted (19-JUL-1996) to the EMBL/GenBank/DDBJ databases.
RL Shigetou Namba, The University of Tokyo, Laboratory of Bioresource
RL Technology, Graduate School of Agricultural and Life Sciences; 1-1-1
RL Midori-cho, Tanashi, Tokyo 188, Japan (Tel:81-424-69-3125,
RL Fax:81-424-69-8786)
XX
RN [2]
RA Namba S., Kashiwazaki S., Lu X., Tamura M., Tsuchizaki T.;
RT "Complete nucleotide sequence of wheat yellow mosaic bymovirus genomic
RT RNAs";
RL Arch. Virol. 143:631-643(1998).
XX
DR GOA; O90733.
DR SPTREMBL; O90733; O90733.
XX
FH Key Location/Qualifiers
FH
FT source 1. .7636
FT /db_xref="taxon:75746"
FT /mol_type="genomic RNA"
FT /organism="Wheat yellow mosaic virus"
FT /segment="1"
FT CDS 163. .7377
FT /codon_start=1
FT /db_xref="GOA:O90733"
FT /db_xref="SPTREMBL:O90733"
FT /product="polyprotein"
FT /protein_id="BAA28768.1"
FT /translation="MEQTAAQTAAHHGTHTNSAQEQPPVSPMNLSANFVAPELFYGSNV
FT EKIKSIIKMRSTTRIIDAISRDFELVAFLILSAAHLMQLETTLRCEMRSSIVPIANSDA
FT GFETCAVLKTALDGMKYHFGTTTLEQGWTSMMRHADSCLQESSSSAVAMLQTQVQKVGS
FT LLISGKNRVESCELYVLHLTARAFRTEYGLKGTCFGEHCALLHDLKACVCGTVPKEFLW
FT AKTKKHSMFTIPEWIARTPTDCFMLCLRAIPIFRRCTMAMSLLYWSCVATVNFPSVMAF
FT LFKRQFTKYIAHSFGKHSIYFLMLGIVALLWAFRTYASKNPKIALQGRSANEKEKKLMM
FT LLASAVGITYLFDYDIAEALGNSLHKISRLSSYLMDDHQGIASRMFSASYGLQAGDNTE
FT DAVTTIISDLLSVTFQIVEEDTTAGVLEEVSDTTFSSWVSVNTIAGRNMSRPLQYPVNQ
FT TYPLTPMNGWMQAQAMVDSDNCWSMVVGHTVSGKSTFLPVQYSNYLAKKLDRRQQILVC
FT EPTQAATENVCSGIAANLGRAVYGRHEGWSRMGDHCIQVMTYGSALQCHAMDPGFISTF
FT DAIFLDEAHDVKEHSLFFESICNNFTSVRKFYVSETPRDGSSCPDATRKFPLTGQQSVC
FT DSYKKFIAAQGGDDLLDVTKYDTVLVFLAGRPECVKAANAWNASITGEKRAFSLSSDNF
FT ATDFAMLTERLKTHKPIIFTTNIIETGVTLSVDCVVDFGYTMRPSLDLNHKTLRLERRR
FT VTANERKQRIGRAGRLKEGHAIVCGDEDRSVNVVSPDVLYGAALLSFKHNVPFYMNDTF
FT ESSWLEGITKSQADTMTIFKLPIFLTRDLVNSDGSVVKEFLDILKKYQFTTSDIKQAPH
FT SIARHLFPTWASYFALFQSLTYGEEKDEIPQESRHARVPFSISTLSKFDWNALALACEQ
FT HRPTVISSFQGLDQPARVVTLQTNSANILGSIAHLCNMRNNYKALIDSNNHVKQSMATN
FT VMFKWFSSSRITADLDRNLSRCLANLSVVETTISSLKQISAGNSQVMASPILQSHLENI
FT IELQSNDMLTDETLSNALGIFNPKTNLFLLLATKGFKLVYVICLLIFINLIYRLLSHWR
FT AWLKNKYDNGNPDALTNTMTVQEGSEILKEVLKMTPAMRREVTKDMKVAVADNNSTFSF
FT VFPDEHIDLEGKGNKYRPREDARLMYSTRDDATFDTWNEKAKEKRKKISDRAEPEMKQP
FT HQKRPYYNFYDLHTDSNILEAIFYTTEGDEFFRSAKSHQDMHSVTVKLKAFLDPKPIIG
FT RHQRQLLEETAQVVIKDDKGTAHRMDISTHNPNTLKNNGSGRVGYDEHRGDFRQESPAL
FT ESPYELEAEFGNSKDEVMLEASTGILLSQVSVDVATRIGRISIGTFNVNCFLYSDWILA
FT PAHFQDRNGAVTIEFPDQTVSTTTDNLNAHGVKRFYGLDLIAIRRPPSLRPEKKLVKAF
FT AITEPVLAQMVFIDSQGIRKFSQSDWIRQEAGSNRWSHKISTQNGMCGCPVLDVGKNRL
FT IGIHVATNRTTGRNEFQPFTREAVDFINGPGNKVPFSPWTFNRPACGYKQGEATFASRT
FT IQNQGSDTLSKINNSILGFGSDLKGQLVQPVTPALRTRFEALFGGGSFELVGTMNKGLI
FT DKHTIVGENDNVHDFMREHPTFAWLQGFMDEYAPSVLNYSAYYKDLCKYNRKKHQLSFN
FT PHELRSATAGMIRMLEDAGLTQGDVRTPQQVVSDMQWNTSAGPSYQGKKRDVCAHLSEQ
FT EVLHLAETSRQQFLACNSIGIWNGSLKAELRTIEKVEAEKTRVFTASPITSLFAMKFYV
FT DDFNKKFYATNLRAPHTVGINKFSRGWEMLHDKLNRPGWLHGSGDGSRFDSSIDPFFFD
FT IIKEIRKHFLPVEHHRAIDLIYDEILNTNICLANGMVIRKNVGNNSGQPSTVVDNTLVL
FT MVSFLYGYIHKTGDHMLKKLNDRFVFVCNGDDNKFAISPEFDAEFGHDFSPELTELGLT
FT YEFDDITDDICANPYMSLTMVRTPFGIGFSLPVERIVAIMQWAKKGGVLHSYLAGISAI
FT YESFNTPKLFKSVYAYLLWLTEEHGSDILAAMTGTETALPIPSMLDVYRLHYGDSSIEL
FT QAADTQTDAQKEEARLAAATKKAADDADAARLRKVEADRVEAARVKKASDDKKARDLTA
FT TKVDDGKIVADAGTKRTNAATKEKWSLPETKPVNAGLKLRISMDKLKSAPKSIIEHDNS
FT IALDSEVKTWSDAVRTSLGITTDEAWINGLIPFLGWCANSGASDKHAENQTMQVDNGTG
FT ALTEMSLSPFIVHARLNGGLRRILRAYSDETVLLLQEHKIVTKWAMKHGASAHAAYAFD
FT FFVPRPWMNPQDIEVAKQARLAALGTGTYNTMLTSDTTNLRKTTNRRVLDTDGHPELT"
FT mat_peptide 163. .>1143
FT /note="zinc finger domain"
FT /product="36k protein"
FT mat_peptide <1144. .>1341
FT /product="7K protein"
FT mat_peptide <1342. .>3318
FT /note="helicase domain"
FT /product="73K protein"
FT mat_peptide <3319. .>4911
FT /note="Nla proteinase domain"
FT /product="60K protein"
FT mat_peptide <4912. .>6495
FT /note="polymerase domain"
FT /product="59K protein"
FT mat_peptide <6496. .>7374
FT /note="capsid protein"
FT /product="32K protein"
FT polyA_site 7635
XX
SQ Sequence 7636 BP; 2164 A; 2018 C; 1689 G; 1765 T; 0 other;
D86634 Length: 7636 July 15, 2003 09:17 Type: N Check: 8755 ..
1 aaaaaataaa taacacagac caaaaccatc aaaacgatca caagccaaca
51 cataccttct gcttcctttt gagcccaagc tttcgtctct caatcccctc
101 gcgacgcctc actctttcca atcgagcccc tcggctctgc cttcttcttc
151 actcccttcg agatggagca gacagcagcc cagaccgccg cgcatcacgg
201 cacacacacg aactccgcac aagagcagcc tcctgtcagc cctatgaatc
251 tgtctgcaaa ctttgttgcc cctgagcttt tctacggttc aaatgtcgag
301 aagatcaaga gtatcataaa gatgcgtagc acgacgcgca tcattgatgc
351 gatatccagg gatttcgaac ttgttgcttt tctcatactc agcgccgcac
401 atctcatgca gctagaaacc acactacgct gcgagatgag atccagcatt
451 gtacctattg caaactcaga tgctggtttt gagacttgcg ccgtcctcaa
501 aacagcgctc gatggaatga agtatcactt tggaacaacc acactcgagc
551 aaggctggac atccatgatg agacacgctg acagctgcct gcaagagagt
601 tcttcctctg ccgtcgccat gttacaaact caagtccaga aagtcggctc
651 cctcttaatc agcggaaaaa atcgcgtaga aagttgcgaa ctttatgtct
701 tacacctcac cgcgcgcgct ttcaggaccg aatatggatt aaagggtact
751 tgctttggag aacactgcgc tttgctgcac gacttaaaag catgcgtttg
801 tggtaccgtg ccaaaagagt ttttgtgggc gaaaaccaaa aagcactcca
851 tgttcactat cccagagtgg atcgcacgta cgccaacaga ctgtttcatg
901 ctgtgtcttc gcgctatacc tatctttcgt aggtgtacga tggcaatgtc
951 tttactttat tggtcgtgtg tagcaactgt taacttccct tctgttatgg
1001 cttttctttt taagcgtcag ttcactaaat acatagctca ttccttcggc
1051 aagcactcca tctatttcct tatgctaggt attgtagccc tactatgggc
1101 attccgcact tatgcttcga aaaacccaaa aatagctctc caaggtagga
1151 gcgcaaacga gaaggaaaag aaactgatga tgttactcgc aagcgccgtt
1201 ggaatcacat atctatttga ctacgacatc gcagaagccc tagggaattc
1251 tctccataaa ataagtcgct tgtcgtctta tctaatggat gatcatcaag
1301 gaatagcctc tcgcatgttt agcgctagct acggacttca agctggggac
1351 aatacggagg atgcagtcac cacaatcatt agtgatctct tgtctgtcac
1401 ctttcaaatt gtcgaagaag atacaactgc tggagtttta gaagaggtca
1451 gcgacacaac tttcagtagt tgggttagcg ttaacactat cgctggaagg
1501 aacatgtcac gccccctgca ataccctgtg aatcagactt acccactcac
1551 accaatgaac gggtggatgc aagctcaagc tatggtcgat tcggacaact
1601 gttggtcaat ggtcgttgga cacacggtat ctggaaaatc cacgtttctt
1651 cctgtccagt actctaacta ccttgccaag aaacttgacc gtcgccaaca
1701 aattctagtt tgcgagccta cgcaagcagc cacagaaaat gtctgctcag
1751 gaattgctgc caacttaggg agagctgtgt atggaaggca tgaaggttgg
1801 tcgcgcatgg gagatcactg cattcaagtt atgacctacg gatcagctct
1851 acagtgccac gcaatggatc caggcttcat atcaaccttt gacgcaatat
1901 tccttgatga ggctcacgat gtcaaggagc attcactttt cttcgagagc
1951 atctgcaaca acttcacgtc tgttagaaag ttctacgtat cagaaacccc
2001 ccgagatggg agctcatgcc cggatgcaac acgcaaattc cctctaacag
2051 gtcagcagag tgtgtgcgat tcatataaga aattcatagc cgcacaaggt
2101 ggagacgatc ttctcgacgt cactaaatac gacaccgttc ttgtttttct
2151 cgctggaaga ccagaatgcg tcaaagctgc aaatgcatgg aatgctagca
2201 ttactggaga aaagcgagct ttctcgctat caagcgacaa cttcgccacc
2251 gattttgcaa tgctaacgga gcgcctcaaa acgcacaaac ccatcatctt
2301 cacaacgaac atcatcgaaa ctggtgttac ccttagcgtt gactgtgttg
2351 ttgactttgg ctataccatg cgaccctccc tcgatctaaa ccacaaaacg
2401 ctacgccttg agcgccgtag agtgactgca aatgagagaa agcaaaggat
2451 tggtagagct gggcgtctca aggaaggaca tgccattgtg tgtggtgatg
2501 aagatcgatc tgtcaatgtc gtctccccgg atgttctgta tggtgccgcg
2551 cttcttagct tcaagcacaa tgtgcccttc tacatgaacg acacctttga
2601 aagctcgtgg cttgaaggaa ttactaagtc tcaggctgac actatgacaa
2651 ttttcaagct ccccatattc ctaacgcgcg atcttgttaa ctccgatggc
2701 tctgtagtaa aggagttcct cgatattctg aagaagtacc agttcacaac
2751 gagcgacatc aagcaagcgc cacacagcat agctcgtcac ctctttccaa
2801 cttgggcctc atactttgca ctcttccaat cactcaccta cggcgaggag
2851 aaagatgaga tcccccagga atctcgtcat gcgcgagttc ccttctccat
2901 ttcaacgctg tctaaattcg actggaatgc cttggcgctt gcatgtgagc
2951 agcatcgccc aacagtgata agctcattcc aaggccttga tcagccagcc
3001 cgcgttgtca ccctacaaac aaactctgca aacatcctcg gaagcatcgc
3051 ccatctctgc aacatgcgta acaattacaa agccttgatt gacagcaaca
3101 accatgtgaa gcaatcaatg gcaaccaacg tcatgttcaa gtggttctca
3151 tcatcccgca tcacagctga tcttgacaga aacttatccc gatgcttagc
3201 caacttgtca gttgtggaaa ccacgattag ctcgctaaag cagatctcag
3251 ctggaaactc gcaggtgatg gcctctccaa tacttcagag tcacctagag
3301 aacataatcg aactacaatc aaacgacatg ttgactgatg agacactgtc
3351 aaacgctcta ggcattttca acccaaagac caacctcttc ctccttctcg
3401 caaccaaagg ttttaaactt gtttacgtta tctgcctgct tatattcata
3451 aacctcatct accgcttgct ctcccactgg agagcttggt tgaagaacaa
3501 gtacgataac gggaaccccg atgcccttac caacaccatg acagttcagg
3551 aaggaagcga aattctcaag gaggtattga agatgactcc agcgatgcgc
3601 agggaggtga ccaaggatat gaaagttgca gttgctgata acaacagcac
3651 attctctttc gtgttccctg acgaacacat tgacctcgag ggaaagggaa
3701 acaagtatcg accacgagag gacgcacgtc tgatgtactc cacgagagac
3751 gacgcaacct tcgatacatg gaacgagaaa gctaaggaga aaaggaagaa
3801 gatatcagac cgcgcagagc cagagatgaa acaaccgcac cagaagcgtc
3851 catactataa cttctacgac cttcatactg atagcaacat tctcgaggca
3901 atattctaca ccacggaagg tgacgaattc ttccggagcg ccaaatccca
3951 ccaggacatg cactcagtaa ctgtaaaact aaaagccttc cttgacccaa
4001 aaccaatcat aggcagacac cagcgccagc tccttgagga aaccgctcag
4051 gtcgttatca aagacgacaa aggcactgcc cacagaatgg acatatcaac
4101 tcacaaccct aacactctta agaacaatgg atcaggaaga gttgggtatg
4151 acgagcatcg cggcgatttc aggcaagaga gccctgcact tgagtcaccg
4201 tacgagttgg aagctgaatt cggaaactca aaggatgaag tcatgcttga
4251 agcatcaaca ggaattctcc tatcccaggt cagcgttgat gttgcgactc
4301 gaattggaag aataagcatc ggaacgttca atgtcaattg cttcctctac
4351 agtgattgga tactagcacc tgctcatttt caggatcgaa acggcgccgt
4401 caccatcgag ttcccagatc aaacggtgag taccacaacc gacaatttaa
4451 atgcgcacgg tgtcaagcga ttttacggac ttgacctcat agccattcga
4501 agaccaccaa gcctccgacc tgagaaaaag ctcgttaaag cgttcgccat
4551 cacagagcca gtgctagcac agatggtctt cattgacagc caagggatcc
4601 gaaagttttc tcaatccgac tggatcagac aggaagctgg ctctaacaga
4651 tggtcacaca agatttcaac tcaaaatggg atgtgtggat gccctgtttt
4701 ggatgttgga aagaaccgtc tcattggaat tcacgttgcc acgaatcgca
4751 ccacaggacg aaatgaattc cagcccttca cacgcgaggc tgtcgacttc
4801 atcaacgggc caggaaacaa ggttcctttc agcccttgga cctttaaccg
4851 ccctgcctgt ggatacaagc aaggagaagc caccttcgct tcacgcacca
4901 tacagaacca aggctccgac actctcagca agatcaacaa ctccatcctt
4951 ggctttggaa gtgatttgaa aggccagctt gttcaacccg taacaccagc
5001 tctacgcact cgctttgaag ccctgtttgg tggtggaagc ttcgaactcg
5051 tcgggacaat gaacaaagga ctcatagaca aacacacaat tgttggggag
5101 aacgacaacg ttcatgattt catgagagag caccccactt tcgcttggct
5151 tcagggtttc atggatgaat acgcaccaag tgtcttgaac tactcggctt
5201 actacaagga tctttgcaag tacaatagga agaagcacca actctccttc
5251 aaccctcacg agcttcggag tgccaccgct ggaatgatca gaatgttgga
5301 agacgccggc ctaactcaag gcgacgtgag gacaccccaa caggttgttt
5351 cagacatgca gtggaacact tccgccggac caagctacca gggcaagaaa
5401 agagacgttt gcgcacatct cagcgagcag gaagttctac accttgcaga
5451 aacgtcgcga cagcagtttc tagcctgcaa ttccatcggc atttggaacg
5501 gatcgctcaa agcagagctt aggacgattg agaaagtgga agctgagaaa
5551 accagagttt tcacggcttc gccaatcacg agtttattcg ccatgaagtt
5601 ctacgttgac gatttcaaca agaagttcta tgcgacaaac ctgagagccc
5651 cacacacggt aggaatcaac aaattcagca gaggctggga aatgctccac
5701 gacaagctca accgcccagg ttggcttcac ggcagtggcg atgggtcacg
5751 atttgatagt tcaattgacc ctttcttctt cgacataatt aaggagattc
5801 gaaagcactt tctaccagtt gagcaccatc gcgcaatcga cctaatatac
5851 gacgagattc tcaacaccaa catttgtttg gcaaatggca tggtaattcg
5901 aaagaacgtt gggaataaca gcgggcagcc aagcacggtc gtagacaaca
5951 cacttgttct catggtctct tttctctacg gttacattca taaaaccggg
6001 gaccatatgc tcaagaaact caacgacaga tttgttttcg tctgcaatgg
6051 tgacgacaac aaatttgcca tttccccaga attcgacgcc gagttcggtc
6101 acgacttttc accggagctc acagagctag gtttgacgta cgagtttgac
6151 gacataacag atgacatctg tgcaaacccc tacatgtccc tgaccatggt
6201 ccgcactccc tttggaattg ggttttcatt gcccgtggaa cgcattgtag
6251 caataatgca gtgggctaag aagggcggcg ttctgcactc ttacttggca
6301 ggaatctcag ccatttacga aagcttcaac acaccaaagt tgttcaaatc
6351 agtctatgcg tatttgttat ggctgacaga ggaacacggc tctgacatcc
6401 tagctgcgat gaccggaaca gagacagctc tcccaattcc ctccatgctc
6451 gatgtgtacc gcctccacta tggtgatagc agcattgagc tccaagcagc
6501 tgacacacaa acagacgcgc agaaggagga agctcgactg gcagccgcca
6551 ccaagaaggc agccgatgat gccgacgctg cgcgtctccg caaggttgag
6601 gcagatcgtg ttgaggccgc aagagtgaag aaagcgagcg atgacaagaa
6651 agccagggac ctcacagcga ccaaggttga tgatggcaaa attgttgccg
6701 acgctggaac aaaaaggacc aatgccgcca ccaaagagaa atggtcactt
6751 ccagaaacaa aacccgtcaa cgcaggacta aagcttcgaa tctcaatgga
6801 caaattaaag agcgcaccca aatctataat cgaacacgac aactccatcg
6851 ctctagattc agaagttaag acgtggtcag acgctgtgcg gaccagtctt
6901 ggcatcacca cggatgaggc atggatcaat ggcctcattc ccttcctcgg
6951 atggtgcgcc aacagtggcg cttcagacaa acacgcagaa aaccagacca
7001 tgcaagttga caatggaact ggagctttaa ccgagatgag tctctcccca
7051 ttcattgttc acgctaggtt gaatggtggc ttgagacgga tcctgcgagc
7101 ctacagtgat gaaactgtgc tcctccttca ggaacacaag attgtcacaa
7151 aatgggctat gaaacacggc gcatctgcac acgccgcgta cgcttttgac
7201 ttctttgtcc cccgcccgtg gatgaaccca caggacatcg aagttgcgaa
7251 acaagcacgt cttgctgctt taggcacagg tacatacaat accatgctca
7301 cctccgacac aaccaacctc cgcaagacaa ccaaccgcag ggttctggat
7351 actgatggac acccagaact aacctaaacc atcacccccc tccgcctttt
7401 atatttgcac tttaaatttt cgcaaaccat caccaccttt cacggccacg
7451 gttacgatct ttaatttctg cacttgtatc aggctcggga cggttctatg
7501 cacaattatg cttcgacagt tgccaaacca gtattttcca cgaggaagag
7551 tatggcgagg cttgagcagc cgtttttaat catacgtcgt tgtatggtgg
7601 cgcattcagt gcgtttacga gtaccagaag gtaaca