Sequence of DPV Soybean mosaic virus

Soybean mosaic virus genomic RNA for virus coat protein, partial cds.

ACC No: D88615

Dated: 2003-07-07 | Length: 1261 | CRC: -802932677

                !!NA_SEQUENCE 1.0
ID   SMD615     standard; RNA; VRL; 1261 BP.
XX
AC   D88615;
XX
SV   D88615.1
XX
DT   25-DEC-1996 (Rel. 50, Created)
DT   07-JUL-2003 (Rel. 76, Last updated, Version 5)
XX
DE   Soybean mosaic virus genomic RNA for virus coat protein, partial cds.
XX
KW   virus coat protein.
XX
OS   Soybean mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-1261
RA   Sano Y.;
RT   ;
RL   Submitted (26-OCT-1996) to the EMBL/GenBank/DDBJ databases.
RL   Yoshitaka Sano, Kyoto Institute of Technology, Faculty of Textile,
RL   Department of Applied Biology; Matsugasaki, Sakyo-ku, Kyoto, Kyoto 606,
RL   Japan (Tel:075-724-7764, Fax:075-724-7764)
XX
RN   [2]
RA   Sano Y., Kawata M., Tanahashi M., Kojima M.;
RT   "Comparative studies on soybean mosaic virus strains B and C: coat protein
RT   sequences and virulence in soybean cultivars.";
RL   Unpublished.
XX
DR   GOA; P90374.
DR   SPTREMBL; P90374; P90374.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .1261
FT                   /db_xref="taxon:12222"
FT                   /mol_type="genomic RNA"
FT                   /organism="Soybean mosaic virus"
FT                   /isolate="B87"
FT                   /lab_host="Glycine max"
FT   CDS             <211. .1008
FT                   /codon_start=1
FT                   /db_xref="GOA:P90374"
FT                   /db_xref="SPTREMBL:P90374"
FT                   /evidence=EXPERIMENTAL
FT                   /product="virus coat protein"
FT                   /protein_id="BAA13653.1"
FT                   /translation="SGKEKEGDMDAGKDPKKSTSSSKGAGTSSKDVNVGSKGKVVPRLQ
FT                   KITRKMNLPMVEGKIILSLDHLLEYKPNQVDLFNTRATRTQFEAWYNAVKDEYELDDEQ
FT                   MGVVMNGFMVWCIDNGTSPDANGVWVMMDGEEQIEYPLKPIVENAKPTLRQIMHHFSDA
FT                   AEAYIEMRNSESPYMPRYGLLRNLRDRELARYAFDFYEVTSKTPNRAREAIAQMKAAAL
FT                   SGVNNKLFGLDGNISTNSENTERHTARDVNQNMHTLLGMGPPQ"
XX
SQ   Sequence 1261 BP; 389 A; 218 C; 319 G; 335 T; 0 other;

  D88615  Length: 1261  July 15, 2003 09:04  Type: N  Check: 9158  ..

       1  ctgcaggaga tccgcaaatt ttatttgtgg cttttgaaca aggatgaatt
      51  taaggagctc gcttcgtctg gaaaagcacc atatattgca gagacagctt
     101  tgagaaagct atacacagat gtcaatgcgc aaacaagtga gctacaaaga
     151  tatcttgaag tgctggactt caatcatgct gatgactgtt gtgaatcagt
     201  gtccttacaa tcaggcaagg agaaggaagg agatatggat gcaggtaagg
     251  atccaaagaa gagcaccagt agtagtaagg gagctggcac aagcagcaaa
     301  gatgtaaatg ttggatcaaa gggaaaggtg gttccgcgtt tgcagaagat
     351  tacaaggaag atgaatcttc caatggttga agggaagatc atcctcagtt
     401  tggaccactt gcttgagtac aaacctaatc aggttgattt attcaacact
     451  cgagcaacaa gaacacagtt cgaagcgtgg tacaatgcag ttaaagatga
     501  atatgagctt gacgatgagc agatgggtgt ggttatgaat ggtttcatgg
     551  tatggtgcat tgacaatggt acatctccag atgctaatgg cgtgtgggtg
     601  atgatggatg gagaggaaca gattgaatat ccgctgaaac ccattgtcga
     651  aaatgcaaaa ccaactttga gacaaatcat gcaccatttc tcagatgcag
     701  cagaagctta cattgagatg agaaattctg aaagtccgta tatgcctaga
     751  tatggactac tgaggaattt gagagataga gagctagctc gctatgcttt
     801  tgatttctat gaggttactt ctaaaacacc aaacagggca agggaagcaa
     851  tagcgcagat gaaggctgca gctctctcgg gagttaacaa caagttgttt
     901  ggacttgatg ggaacatctc aaccaactcc gaaaatactg aaaggcacac
     951  tgcaagggat gtgaatcaaa acatgcacac tcttttgggc atgggcccac
    1001  cgcagtaaag gctaagtaaa ttggtcacag ttatcatttc gggtcgcttt
    1051  atagtttact ataatatagt agttgcactg tctttaaata tagtgtgatt
    1101  gcatcaccaa ataatgtttc tgtttagtgt ggttttaacc accccagtgt
    1151  gctttatgtt atagtttatg aatggcaggg agaaccattg tgttgccgga
    1201  gccctttgaa gagtgatttc atcacgtcta gtggccgagg tgcggcaatg
    1251  tttgttgtcc t