Sequence of DPV Soybean mosaic virus

Soybean mosaic virus genomic RNA for virus coat protein, partial cds.

ACC No: D88616

Dated: 2003-07-07 | Length: 1260 | CRC: -2128020616

                !!NA_SEQUENCE 1.0
ID   SMD616     standard; RNA; VRL; 1260 BP.
XX
AC   D88616;
XX
SV   D88616.1
XX
DT   25-DEC-1996 (Rel. 50, Created)
DT   07-JUL-2003 (Rel. 76, Last updated, Version 5)
XX
DE   Soybean mosaic virus genomic RNA for virus coat protein, partial cds.
XX
KW   virus coat protein.
XX
OS   Soybean mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-1260
RA   Sano Y.;
RT   ;
RL   Submitted (26-OCT-1996) to the EMBL/GenBank/DDBJ databases.
RL   Yoshitaka Sano, Kyoto Institute of Technology, Faculty of Textile,
RL   Department of Applied Biology; Matsugasaki, Sakyo-ku, Kyoto, Kyoto 606,
RL   Japan (Tel:075-724-7764, Fax:075-724-7764)
XX
RN   [2]
RA   Sano Y., Kawata M., Tanahashi M., Kojima M.;
RT   "Comparative studies on soybean mosaic virus strains B and C: coat protein
RT   sequences and virulence in soybean cultivers.";
RL   Unpublished.
XX
DR   GOA; P89200.
DR   SPTREMBL; P89200; P89200.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .1260
FT                   /db_xref="taxon:12222"
FT                   /mol_type="genomic RNA"
FT                   /organism="Soybean mosaic virus"
FT                   /isolate="CN"
FT                   /lab_host="Glycine max"
FT   CDS             <211. .1008
FT                   /codon_start=1
FT                   /db_xref="GOA:P89200"
FT                   /db_xref="SPTREMBL:P89200"
FT                   /evidence=EXPERIMENTAL
FT                   /product="virus coat protein"
FT                   /protein_id="BAA13654.1"
FT                   /translation="SGKEKEGEMDASKDPKKNTNSSKGTGTSNKDVNVGSKGKVVPRLQ
FT                   KITRKMNLPMVEGKIILSLDHLLEYKPNQVDLFNTRATRTQFEAWYNAVKDEYELDDEQ
FT                   MGVVMNGFMVWCIDNGTSPDANGVWVMMDGEEQIEYPLKPIVENAKPTLRQIMHHFSDA
FT                   AEAYIEMRNSESPYMPRYGLLRNLRDRELARYAFDFYEVTSKTPNRAREAIAQMKAAAL
FT                   SGVNNKLFGLDGNISTNSENTERHTARDVNQNMHTLLGMGPPQ"
XX
SQ   Sequence 1260 BP; 392 A; 228 C; 310 G; 330 T; 0 other;

   D88616  Length: 1260  July 15, 2003 09:04  Type: N  Check: 205  ..

       1  ctgcaggaga tccgcaaatt ttatttgtgg ctcctaaaca aggatgaatt
      51  caaagagctc gcctcatctg gaaaggcacc atatattgca gagacagctt
     101  tgagaaagct gtacacagat gtcaatgcgc agacaagtga gctacaaaga
     151  taccttgaag tgctggactt caatcatgct gatgattgtt ttgaatcagt
     201  gtccttacaa tcaggcaagg aaaaagaagg ggaaatggat gcaagcaagg
     251  acccaaagaa gaacaccaac agtagcaaag gcactggtac gagcaacaaa
     301  gatgtaaatg ttgggtcgaa gggaaaagtt gttccacgct tgcagaagat
     351  tacaaggaag atgaatcttc caatggttga agggaagatc attctcagtt
     401  tggaccactt gcttgagtat aaacctaatc aggttgattt attcaatact
     451  cgagcaacaa gaacacagtt tgaggcatgg tacaatgcag tcaaagatga
     501  atatgaactt gatgatgagc agatgggtgt agtcatgaat ggtttcatgg
     551  tttggtgtat tgacaatggc acatctccag acgccaatgg tgtgtgggta
     601  atgatggatg gagaggagca gattgaatat ccgctgaagc ccattgttga
     651  gaatgcgaaa ccaactttga gacaaatcat gcatcatttt tcagatgcag
     701  ctgaagctta cattgagatg agaaattctg aaagtccgta tatgcctaga
     751  tatggactac tgaggaattt gagagacaga gagttagccc gctatgcctt
     801  tgatttctat gaagtcactt ccaaaacacc gaacagggca agggaggcaa
     851  tagcgcagat gaaggctgca gctctctcgg gagttaacaa caagttattt
     901  gggcttgatg gaaatatctc aaccaactcc gaaaatactg aaaggcacac
     951  tgcaagagat gtgaatcaaa acatgcacac tcttctgggc atgggtccac
    1001  cgcagtaaag gctaggtaaa ctggccacag ttatcatttc gggtcgcttt
    1051  atagtttgct ataatgtagt agttgcactt tctttaagta tagtgtgatt
    1101  gaatcaccac ataatgcttt tgtttagtgt ggtttaccca cctcagtgtg
    1151  ctttatatta tagtttatga atggcaggga gaaccattgc aatgccggag
    1201  ttttctacag agtgattcta tcacgtctag tggccgaggc acggcaatgt
    1251  ttgttgtcct