Sequence of DPV Papaya ringspot virus

Papaya ringspot virus isolate Kakhon Pathom NPT11 coat protein (CP) gene, partial cds.

ACC No: DQ085861

Dated: 2005-07-05 | Length: 861 | CRC: 2042113083

                !!NA_SEQUENCE 1.0
ID   DQ085861   standard; genomic RNA; VRL; 861 BP.
XX
AC   DQ085861;
XX
SV   DQ085861.1
XX
DT   05-JUL-2005 (Rel. 84, Created)
DT   05-JUL-2005 (Rel. 84, Last updated, Version 1)
XX
DE   Papaya ringspot virus isolate Kakhon Pathom NPT11 coat protein (CP) gene,
DE   partial cds.
XX
KW   .
XX
OS   Papaya ringspot virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-861
RA   Chowpongpang S., Attathom S., Kositratana W.;
RT   "PRSV resistance of transgenic papaya against papaya ringspot potyvirus
RT   from different geographic in Thailand";
RL   Unpublished.
XX
RN   [2]
RP   1-861
RA   Chowpongpang S., Attathom S., Kositratana W.;
RT   ;
RL   Submitted (03-JUN-2005) to the EMBL/GenBank/DDBJ databases.
RL   National Center for Genetic Engineering and Biotechnology, National Science
RL   and Technology Development Agency, 113 Pahonyothin Science Park,
RL   Klongluang, Pathumtanee 12120, Thailand
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .861
FT                   /country="Thailand"
FT                   /db_xref="taxon:12205"
FT                   /mol_type="genomic RNA"
FT                   /note="biotype: P"
FT                   /organism="Papaya ringspot virus"
FT                   /isolate="Kakhon Pathom NPT11"
FT   gene            <1. .861
FT                   /gene="CP"
FT   CDS             <1. .861
FT                   /codon_start=1
FT                   /note="capsid protein"
FT                   /gene="CP"
FT                   /product="coat protein"
FT                   /protein_id="AAY96779.1"
FT                   /translation="SKTEAVDAGLNEKLKDKEKQKEEKDKQKGKENNEASDGNDVSTST
FT                   KTGERDRDVNAGTSGTFTVPRIKSFTDKMILPRIKGKTVLNLNHLLQYNPQQIDISNTP
FT                   APQSQFTKRYEGVRNDYRLNDNERQVMLNGLMVWCMKNGTSPDIYGVWVMMDGETQVDY
FT                   PIKPLIEHATPSFRQIMAHFSNAAEASFAKRNAPERYMPRYGIKRNLPGISLARYAFDF
FT                   YEVNSKTPDRAREAHMQMKAAALRNTSRRMFGMDGSVSNKEENTERHTVEDVYRDMHSL
FT                   LGMRN"
XX
SQ   Sequence 861 BP; 300 A; 157 C; 203 G; 201 T; 0 other;

  DQ085861  Length: 861  July 12, 2005 08:41  Type: N  Check: 6733  ..

       1  tccaaaactg aagctgtgga tgctggtctt aatgagaagc tcaaagataa
      51  agaaaaacaa aaagaagaaa aagataaaca aaaaggtaaa gaaaataatg
     101  aagctagtga cggaaatgat gtgtcaacta gcacaaaaac tggagagaga
     151  gatagagatg tcaatgccgg aactagtggt actttcactg ttccaagaat
     201  aaaatcattt actgacaaga tgattttgcc aagaattaag ggaaaaactg
     251  tccttaattt aaatcatctt cttcagtata atccgcaaca aatagacatc
     301  tcaaacactc ctgcccctca atctcaattc acaaagaggt atgagggagt
     351  gaggaatgat taccgcctta atgataacga aaggcaagta atgttaaatg
     401  gtttgatggt ttggtgcatg aaaaatggaa catccccaga catatatggt
     451  gtctgggtga tgatggatgg ggaaactcaa gtggattatc ccatcaagcc
     501  tttgatcgaa catgcaactc cttcgttcag gcaaatcatg gctcacttca
     551  gtaacgcggc agaggcatcc ttcgcaaaga ggaatgctcc tgaaaggtac
     601  atgccgcggt atggaatcaa gaggaatttg cctggcatta gtcttgctag
     651  atatgctttc gatttctatg aggtgaattc aaaaacacct gatagggctc
     701  gtgaagctca tatgcagatg aaggctgcag cgctgcgcaa cactagtcgc
     751  agaatgtttg gaatggacgg cagtgtcagt aacaaggaag aaaacacgga
     801  gagacacaca gtggaagatg tctatagaga catgcactct ctcctgggta
     851  tgcgcaactg a