Sequence of DPV Papaya ringspot virus

Papaya ringspot virus isolate Saraburi SBR2 coat protein (CP) gene, partial cds.

ACC No: DQ085865

Dated: 2005-07-05 | Length: 861 | CRC: -1437125568

                !!NA_SEQUENCE 1.0
ID   DQ085865   standard; genomic RNA; VRL; 861 BP.
XX
AC   DQ085865;
XX
SV   DQ085865.1
XX
DT   05-JUL-2005 (Rel. 84, Created)
DT   05-JUL-2005 (Rel. 84, Last updated, Version 1)
XX
DE   Papaya ringspot virus isolate Saraburi SBR2 coat protein (CP) gene, partial
DE   cds.
XX
KW   .
XX
OS   Papaya ringspot virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-861
RA   Chowpongpang S., Attathom S., Kositratana W.;
RT   "PRSV resistance of transgenic papaya against papaya ringspot potyvirus
RT   from different geographic in Thailand";
RL   Unpublished.
XX
RN   [2]
RP   1-861
RA   Chowpongpang S., Attathom S., Kositratana W.;
RT   ;
RL   Submitted (03-JUN-2005) to the EMBL/GenBank/DDBJ databases.
RL   National Center for Genetic Engineering and Biotechnology, National Science
RL   and Technology Development Agency, 113 Pahonyothin Science Park,
RL   Klongluang, Pathumtanee 12120, Thailand
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .861
FT                   /country="Thailand"
FT                   /db_xref="taxon:12205"
FT                   /mol_type="genomic RNA"
FT                   /note="biotype: P"
FT                   /organism="Papaya ringspot virus"
FT                   /isolate="Saraburi SBR2"
FT   gene            <1. .861
FT                   /gene="CP"
FT   CDS             <1. .861
FT                   /codon_start=1
FT                   /note="capsid protein"
FT                   /gene="CP"
FT                   /product="coat protein"
FT                   /protein_id="AAY96783.1"
FT                   /translation="SKTEAVDAGLNERLKDKEKHKEEKDKQKGKENNEASDGNPVSTST
FT                   KTGERDRDVNAGTSGTFTVPRIKLFTDKMILPRIKGKTVLNLNHLLQYNPQQVDISNTR
FT                   ATQSQFEKWYEGVRNDYCLNDNEMQVMLNGLMVWCIENGTFPDISGVWVMMDGETQVDY
FT                   PIKPLIEHATPSFRQIMAHFSNAAEAYIAKRNATERYMPRYGIKRNLTDISLARYAFDF
FT                   YEVNSKTPDRAREAHMQMKAAALRNTGRRMFGMDGSVSNKEENTERHTVDDVNRDMHSN
FT                   LGMRN"
XX
SQ   Sequence 861 BP; 298 A; 155 C; 205 G; 203 T; 0 other;

  DQ085865  Length: 861  July 12, 2005 08:41  Type: N  Check: 6771  ..

       1  tccaaaactg aagctgtgga tgctggtctt aatgaaaggc tcaaagacaa
      51  agaaaaacat aaagaagaaa aagataaaca aaaaggtaaa gaaaataatg
     101  aagctagtga cggaaaccct gtgtcaacta gcacaaaaac tggagagaga
     151  gatagagatg tcaatgccgg aactagtggt actttcactg ttccgagaat
     201  aaagttattt actgacaaga tgattttacc aagaattaag ggaaaaactg
     251  tccttaattt aaatcatctt cttcagtata atccgcaaca agtagacatc
     301  tcaaacactc gtgccactca atctcaattc gaaaagtggt atgagggagt
     351  taggaatgat tattgtctta atgataacga aatgcaagtg atgttaaacg
     401  gtttgatggt ttggtgcatc gaaaatggaa cattcccaga catatctggt
     451  gtctgggtga tgatggatgg ggaaactcaa gtcgattatc ccatcaagcc
     501  tttgatcgaa catgcaactc cttcgttcag gcaaatcatg gctcacttca
     551  gtaacgcggc agaggcatac atcgcaaaga ggaatgctac tgagaggtac
     601  atgccgcggt atggaatcaa gaggaatttg actgacatta gtctcgctag
     651  atatgctttt gacttctatg aggtgaactc aaaaacacct gatagggctc
     701  gtgaagctca tatgcagatg aaggctgcag cgctgcgcaa cactggtcgc
     751  agaatgtttg gaatggacgg cagtgtcagt aacaaggaag aaaacacgga
     801  gagacacaca gtggatgatg tcaacagaga catgcactct aacctgggta
     851  tgcgcaattg a