Sequence of DPV Passiflora foetida virus Y
Passiflora foetida virus Y polyprotein gene, partial cds.
ACC No: DQ112219
Dated: 2006-11-28 | Length: 1573 | CRC: 327076959
ID DQ112219; SV 1; linear; genomic RNA; STD; VRL; 1573 BP.
XX
AC DQ112219;
XX
DT 21-JUL-2005 (Rel. 84, Created)
DT 28-NOV-2006 (Rel. 89, Last updated, Version 2)
XX
DE Passiflora foetida virus Y polyprotein gene, partial cds.
XX
KW .
XX
OS Passiflora foetida virus Y
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC Potyvirus.
XX
RN [1]
RP 1-1573
RA Mackenzie A.M., Gibbs A.J.;
RT "Potyviruses in Australian native plants";
RL Unpublished.
XX
RN [2]
RP 1-1573
RA Mackenzie A.M., Gibbs A.J.;
RT ;
RL Submitted (30-JUN-2005) to the EMBL/GenBank/DDBJ databases.
RL Botany and Zoology, Australian National University, Canberra, ACT 2601,
RL Australia
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FH Key Location/Qualifiers
FH
FT source 1. .1573
FT /organism="Passiflora foetida virus Y"
FT /specific_host="Passiflora foetida"
FT /mol_type="genomic RNA"
FT /country="Australia"
FT /virion
FT /db_xref="taxon:336639"
FT CDS <1. .1368
FT /codon_start=1
FT /product="polyprotein"
FT /note="contains NIb and virion proteins"
FT /db_xref="GOA:Q4F6S8"
FT /db_xref="InterPro:IPR001205"
FT /db_xref="InterPro:IPR001592"
FT /db_xref="UniProtKB/TrEMBL:Q4F6S8"
FT /protein_id="AAZ14976.1"
FT /translation="WDDRDIQERLVFFANGDDIILAVREEDVWLYDVLGSSFSELGLNY
FT NFDERTRRREDLWFMSHQAIEVDGLYIPKLERERIVSILEWDRSKELTHRTEAICAAMI
FT EAWGHTDLLQEIRKFYLWLLQKDEFKELSALGKTPYIAETALRKLYTDRNALQEELQIY
FT ADLLESSDDEEISEKVVLQSSGKKDETIDAGNDKQAKNNSQKNTGQEGTSGTKDKEKDI
FT NAGTHGKVVPRLQKITRNMRLPTVKGNVILDVGHLLDYKPAQTDLFNTRARKAQFEMXY
FT XAVKREYELEDHQMAVVMNGFMVWCIDNGTSPDINGVWVMMDGDEQIEYPLKPMVENAK
FT PTLRQIMHHFSDAAEAYIEMRNSEAPYMPRYGLLRNLRDRSLARYAFDFYEVNFKTSER
FT AREAVAQMKAAAFSNVNNRLYGLDGNVATATEDTERHTARDVSRNMHSLLGMNFMQ"
XX
SQ Sequence 1573 BP; 521 A; 254 C; 385 G; 411 T; 2 other;
dq112219 Length: 1573 28-NOV-2006 Type: N Check: 7172 ..
1 tgggatgatc gtgacataca ggagagactt gttttctttg ccaatggtga
51 cgacataatc cttgcagtga gagaggaaga tgtttggttg tatgatgtcc
101 ttggttcttc attttcagaa ctaggactga attacaattt tgatgagagg
151 actaggagga gagaagattt atggtttatg tcgcaccaag ctatagaagt
201 tgatggtctc tacataccca aacttgaaag agagagaatt gtttcaattc
251 ttgaatggga taggagcaaa gagctgacac atcgaacaga agccatatgt
301 gcagcgatga ttgaagcgtg gggccacaca gatttattgc aggaaatccg
351 aaagttttat ttgtggcttc tgcaaaaaga tgagttcaaa gaattatcag
401 cacttggcaa aacaccgtac attgcagaaa cagcattgag gaaactgtac
451 actgatagaa atgcactcca ggaagagctg caaatctatg ctgatctttt
501 agagtcttct gatgatgagg aaatttcaga aaaagtcgta ctgcaatcgt
551 caggcaagaa agatgaaacg attgatgctg gaaatgacaa acaagcaaag
601 aataacagtc agaagaacac agggcaggaa ggaactagtg ggacgaaaga
651 caaagaaaaa gatattaatg ccggcacaca tggcaaggtc gtcccaagac
701 tacaaaagat tacaaggaac atgagattgc ctacggtgaa aggaaacgta
751 attcttgatg ttggtcattt attggattac aaacctgctc aaacagatct
801 ctttaacaca agagccagaa aagcacaatt tgaaatgtgk tatgakgcag
851 taaagagaga gtatgagctt gaggatcatc aaatggccgt tgtgatgaat
901 ggattcatgg tttggtgtat tgacaatggc acatcaccag acataaatgg
951 agtttgggtc atgatggatg gagatgaaca gattgaatat cctttaaaac
1001 caatggtaga gaatgctaaa ccaacactca ggcaaattat gcatcacttt
1051 tcagacgcag ctgaagcgta cattgagatg agaaatagtg aagcaccata
1101 catgcctagg tatggattgc tgaggaattt aagagatcgg agtcttgcca
1151 gatatgcttt tgatttctac gaagttaact ttaaaacttc tgaaagggca
1201 cgggaagctg tggctcaaat gaaggcagcc gctttcagca acgtaaacaa
1251 tagattgtat ggattggatg gaaacgttgc aacagcaact gaggacactg
1301 aaaggcacac tgctagggat gtcagtcgca acatgcattc acttttagga
1351 atgaatttta tgcagtaaag gctgggtaaa ctggccacag tgattcttgg
1401 ttaacagtag tagtaatata gtcatattaa gcactttacc ttttgtttag
1451 tgtgggtatg ccacctttat gttattgcaa gggtttgtca tagtgtggtt
1501 gcaccaccaa agtgtttact atttctgttt taatattatg gtaaagcgga
1551 aggaccgtcg tcggagctaa acc