Sequence of DPV NADRV

Adult diarrheal rotavirus strain J19 VP7 gene, complete cds.

ACC No: DQ113905

Dated: 2008-09-20 | Length: 820 | CRC: -601146531

                
ID   DQ113905; SV 1; linear; genomic RNA; STD; VRL; 820 BP.
XX
AC   DQ113905;
XX
DT   15-AUG-2005 (Rel. 84, Created)
DT   20-SEP-2008 (Rel. 97, Last updated, Version 3)
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DE   Adult diarrheal rotavirus strain J19 VP7 gene, complete cds.
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KW   .
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OS   Adult diarrheal rotavirus strain J19
OC   Viruses; dsRNA viruses; Reoviridae; Sedoreovirinae; Rotavirus.
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RN   [1]
RP   1-820
RX   DOI; 10.1099/vir.0.2008/001933-0.
RX   PUBMED; 18796732.
RA   Jiang S., Ji S., Tang Q., Cui X., Yang H., Kan B., Gao S.;
RT   "Molecular characterization of a novel adult diarrhoea rotavirus strain J19
RT   isolated in China and its significance for the evolution and origin of
RT   group B rotaviruses";
RL   J. Gen. Virol. 89(Pt 10):2622-2629(2008).
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RN   [2]
RP   1-820
RA   Ji S.Z., Jiang S.J., Yang H.Y.;
RT   "Complete genomic sequence of a novel adult diarrhea rotavirus strain J19
RT   related to the evolution and origin of group B rotaviruses";
RL   Unpublished.
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RN   [3]
RP   1-820
RA   Ji S.Z., Jiang S.J., Yang H.Y.;
RT   ;
RL   Submitted (30-JUN-2005) to the EMBL/GenBank/DDBJ databases.
RL   Department of Diarrhea Disease, National Institute for Communicable Disease
RL   Control and Prevention, Chinese Center for Disease Control and Prevention,
RL   P.O.Box 5, Changping, Beijing 102206, People's Republic of China
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FH   Key             Location/Qualifiers
FH
FT   source          1. .820
FT                   /organism="Adult diarrheal rotavirus strain J19"
FT                   /strain="J19"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:335103"
FT   CDS             15. .791
FT                   /codon_start=1
FT                   /product="VP7"
FT                   /note="outer capsid protein"
FT                   /db_xref="GOA:Q45UF2"
FT                   /db_xref="InterPro:IPR008818"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q45UF2"
FT                   /protein_id="AAZ03493.1"
FT                   /translation="MLLFIILSVGVDAISYIQNDRSNDLCIVYEMTSFGTSFNNANDSL
FT                   VKLHKHMGLKYEVCKIESNANALTQMQKCNCIYDDTPQIVVFTNFKKSSLKTLIGTENK
FT                   CELLPQTTIYTPTVDIESEYFIYGNDVKICYLDKNLLGIGCDATDTTSWLDLDAGLPTN
FT                   HALDIPEITSDGFKLFAKYSDSFLCQRLMDEPKKQIQFYAEVDNVPSNDVIESSRSWAS
FT                   VWKVVKTVLHFTYHILDLFYGNRRATARMIEHSPLG"
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SQ   Sequence 820 BP; 288 A; 134 C; 143 G; 255 T; 0 other;

dq113905 Length: 820  20-SEP-2008  Type: N  Check: 5778  ..

       1  ggcaatttga agccatgttg ctctttatta ttctatctgt tggcgttgac
      51  gccataagtt acattcaaaa tgatagaagt aatgacttgt gtatcgttta
     101  tgaaatgact agttttggaa caagttttaa caacgcaaat gactcattag
     151  ttaagctaca taagcatatg ggattgaaat atgaagtttg taaaatagaa
     201  tcgaacgcta atgcattaac tcaaatgcaa aagtgtaatt gtatatatga
     251  tgatacacca caaatagttg tcttcaccaa ttttaaaaaa tctagtttaa
     301  aaacgttaat tggaactgaa aataaatgtg aattactacc acagacaaca
     351  atctacactc caaccgttga tattgaatcg gaatatttca tatatggaaa
     401  cgatgtcaaa atatgttatt tagacaaaaa tttactggga attggatgtg
     451  atgccactga tacaacttct tggcttgatt tagacgccgg attacctacc
     501  aatcacgcac ttgatattcc tgagattaca agcgatggat ttaaactatt
     551  cgcaaaatac agtgattctt tcttatgtca acgactaatg gatgagccaa
     601  aaaaacaaat tcaattctac gcagaggtag acaatgtccc atctaatgat
     651  gtaatagaaa gttcaagatc ttgggcttct gtttggaaag ttgttaaaac
     701  agtcttacat tttacttacc atatacttga tttgttctat ggtaacagac
     751  gtgctacagc tagaatgatt gagcattcac cactaggttg agaaatcccg
     801  aatggtgagc aaatataccc