Sequence of DPV Cauliflower mosaic virus
Cauliflower mosaic virus isolate Ca-CSh1 inclusion body protein gene, partial cds.
ACC No: DQ119040
Dated: 2006-01-01 | Length: 1531 | CRC: -1931077088
ID DQ119040 standard; genomic DNA; VRL; 1531 BP.
XX
AC DQ119040;
XX
SV DQ119040.1
XX
DT 01-JAN-2006 (Rel. 86, Created)
DT 01-JAN-2006 (Rel. 86, Last updated, Version 1)
XX
DE Cauliflower mosaic virus isolate Ca-CSh1 inclusion body protein gene,
DE partial cds.
XX
KW .
XX
OS Cauliflower mosaic virus
OC Viruses; Retro-transcribing viruses; Caulimoviridae; Caulimovirus.
XX
RN [1]
RP 1-1531
RA Farzadfar S., Pourrahim R., Golnaraghi A.R., Ahoonmanesh A., Mosahebi G.H.;
RT "Some properties of CaMV isolated from cauliflower in Shiraz, Fars province
RT of Iran";
RL Unpublished.
XX
RN [2]
RP 1-1531
RA Farzadfar S., Pourrahim R., Golnaraghi A.R., Ahoonmanesh A., Mosahebi G.H.;
RT ;
RL Submitted (07-JUL-2005) to the EMBL/GenBank/DDBJ databases.
RL Department of Plant Virology, Plant Pests and Diseases Research Institute,
RL Tabnak Av., Chamran High Way, P.O. Box: 19395-1454, Tehran 1985813131, Iran
XX
FH Key Location/Qualifiers
FH
FT source 1. .1531
FT /country="Iran"
FT /db_xref="taxon:10641"
FT /mol_type="genomic DNA"
FT /virion
FT /organism="Cauliflower mosaic virus"
FT /isolate="Ca-CSh1"
FT /specific_host="Brassica oleracea var botrytis"
FT CDS <1. .>1531
FT /codon_start=3
FT /note="ORF VI"
FT /product="inclusion body protein"
FT /protein_id="AAZ95266.1"
FT /translation="LMQEKILMLELDLVRAKISLARANGSSQQGELSLRRETPEQEVAV
FT HSALATFTPTQVKAIPEQTAPGKESTNPLMASILPKDMNPVQTGMKLAVPSDFLRPHQG
FT IPIPQKSELNSTVTPHGVESGIQHPHTNYYVVYNGPHAGIYDDWGCTKAATNGVPGVAH
FT KKFATITEARAAADAYTTSQQTDRLNFIPKGEAQLKPKSFAKALTSPPKQKAHWLTLGT
FT KKPSSDPAPKEISFDPEITMDDFLYLYDLVRKFDGEGDDTMFTTDNEKISLFNFRKNAN
FT PQMVREAYAAGLIKTIYPSNNLQEIKYLPKKVKDAVKRFRTNCIKNTEKDIFLKIRSTI
FT PVWTIQGLLHKPRQVIEIGVSKKVVPTESKAMESKIQIEDLTELAVKTGEQFIQSLLRL
FT NDKKKIFVNMVEHDTLVYSKNIKDTVSEDQRAIETFQQRVISGNLLGFHCPAICHFIVK
FT IVEKEGGAYKCHHCDKGKAIVQDASADEGTTDKSGPPPTRSIVEKEDVPTTS"
XX
SQ Sequence 1531 BP; 521 A; 373 C; 326 G; 311 T; 0 other;
dq119040 Length: 1531 01-JAN-2006 Type: N Check: 8872 ..
1 tcctcatgca agagaaaata ctaatgctag agctcgatct agtaagagca
51 aaaataagct tagcaagagc taacggctct tcgcaacaag gagaactctc
101 tctccgccgt gaaacaccgg aacaagaagt agcagttcac tctgcactgg
151 ccacttttac gccaactcaa gtaaaagcta ttccagagca aacggctcct
201 ggtaaagaat caacaaatcc gttgatggct agtatcttgc caaaagatat
251 gaacccagta cagactggga tgaagcttgc agtgccatcg gactttttac
301 gtcctcatca gggaattcca atcccacaaa aatctgagct taacagcaca
351 gttactcctc acggagtaga gtcgggtatt caacaccctc ataccaacta
401 ctacgtcgtg tataacggac ctcatgccgg tatatatgat gactggggtt
451 gtacaaaggc agcaacaaac ggcgttcccg gagttgcaca caagaagttt
501 gccactatta cagaggcaag agcagcagct gacgcgtata caacaagtca
551 gcaaacagat aggttgaatt tcatccccaa aggagaagct caactcaagc
601 ccaagagctt tgccaaggcc ctaacaagcc caccaaagca aaaagcccac
651 tggctcacgc taggaactaa aaagcccagc agtgatccag ccccaaaaga
701 gatctccttc gacccggaga tcacaatgga cgacttcctc tatctctacg
751 atctagtaag gaagttcgac ggagaaggtg acgataccat gttcaccact
801 gataatgaga agattagcct cttcaatttc agaaagaacg ctaacccaca
851 gatggttaga gaggcctacg cagcaggact cattaagacg atctacccga
901 gcaataatct ccaggagatc aaataccttc ccaagaaggt taaagatgca
951 gtcaaaagat tcaggactaa ctgcatcaag aacacagaga aagatatatt
1001 tctcaagatc agaagtacta ttccagtatg gacgatccaa ggcttgcttc
1051 ataaaccaag gcaagtaata gagattggag tctctaaaaa agtagttcct
1101 acagaatcaa aggctatgga gtcaaagatt caaattgagg atctaacaga
1151 actcgccgtg aagactggcg aacagttcat acagagtctt ttacgactca
1201 atgacaagaa gaaaatcttc gtcaacatgg tggagcacga cactctcgtc
1251 tactccaaga atatcaagga tacagtctca gaagaccaaa gggcaattga
1301 gactttccaa caaagggtaa tttcgggaaa cctcctcgga ttccattgcc
1351 cagctatctg tcacttcatc gtgaagatag tagaaaagga aggtggcgcc
1401 tacaaatgtc accattgcga taaaggaaag gctatcgttc aagatgcctc
1451 tgccgacgaa gggaccacag acaaaagtgg acctccaccc acgaggagca
1501 tcgtggaaaa agaagacgtt ccaaccacgt c