Sequence of DPV Ranunculus mosaic virus
Ranunculus mosaic virus polyprotein gene, partial cds.
ACC No: DQ152192
Dated: 2009-04-22 | Length: 1591 | CRC: -1677253778
ID DQ152192; SV 1; linear; genomic RNA; STD; VRL; 1591 BP.
XX
AC DQ152192;
XX
DT 06-SEP-2005 (Rel. 85, Created)
DT 22-APR-2009 (Rel. 100, Last updated, Version 2)
XX
DE Ranunculus mosaic virus polyprotein gene, partial cds.
XX
KW .
XX
OS Ranunculus mosaic virus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae.
XX
RN [1]
RP 1-1591
RX PUBMED; 18943173.
RA Turina M., Ciuffo M., Lenzi R., Rostagno L., Mela L., Derin E., Palmano S.;
RT "Characterization of Four Viral Species Belonging to the Family Potyviridae
RT Isolated from Ranunculus asiaticus";
RL Phytopathology 96(6):560-566(2006).
XX
RN [2]
RP 1-1591
RA Turina M., Ciuffo M., Palmano S., Rostagno L.;
RT ;
RL Submitted (02-AUG-2005) to the EMBL/GenBank/DDBJ databases.
RL IVV, CNR, Strada delle Cacce 73, Torino, TO 10135, Italy
XX
FH Key Location/Qualifiers
FH
FT source 1. .1591
FT /organism="Ranunculus mosaic virus"
FT /isolate="RN136"
FT /mol_type="genomic RNA"
FT /country="Italy"
FT /db_xref="taxon:341112"
FT CDS <1. .1382
FT /codon_start=3
FT /product="polyprotein"
FT /note="NIb-CP"
FT /db_xref="GOA:Q3S850"
FT /db_xref="InterPro:IPR001592"
FT /db_xref="UniProtKB/TrEMBL:Q3S850"
FT /protein_id="AAZ79371.1"
FT /translation="NGDDLLLAVHPQFEYVLNEMQSLFLQLGLKYTFESRTRVKSELWF
FT MSHQGHKVGDLYIPKLEVERIVSILEWDRAIEPEHRLEAICASMIEAWGYTELLNEIRK
FT FYLWVLDQTPYSDLAREGKAPYISEIALKRLYTGIDGTARDLHPYLALINESMELECDE
FT PVTFQGKDDIVDAGKKQDQEKDKQQPKFDNPPQLPPQDKTAKPDQPSSSNVNKPDQTVK
FT DQDVNAGTKGILSVPRLKKLGNELQLPKYQNKSAINLDFLITYEPQQEDLSNKRSTDDQ
FT FAQWFEGVRDEYGVTDEQMRILLGGLMVWCIENGTSPSINGNWIMMDGNEQVSYPIKPL
FT LDHAKPTFRQIMTRFSPLAVAYITKVNQKRAHMPRYGSQRNLTDMSLACFAFDFYEINS
FT RTPARAREAHMQMKAAAIRNGSNRMFGLDGNVGTQVQDTERHTTNDVNRHVHNLDGAST
FT W"
FT mat_peptide <1. .506
FT /product="NIb"
FT mat_peptide 507. .1379
FT /product="coat protein"
FT 3'UTR 1383. .1591
XX
SQ Sequence 1591 BP; 524 A; 305 C; 369 G; 393 T; 0 other;
dq152192 Length: 1591 22-APR-2009 Type: N Check: 5939 ..
1 ttaacgggga cgatttgcta ctggctgtgc atccacaatt tgagtatgtt
51 cttaacgaga tgcaatcact attcctgcag cttggactca aatacacatt
101 cgaatcacga acaagagtga agtctgagtt atggtttatg tcacatcagg
151 gccataaagt tggtgaccta tacataccaa aacttgaagt tgaacgaata
201 gtgtcgatcc tagaatggga cagagcaatt gagccagaac atcgattaga
251 ggccatttgt gcctctatga ttgaagcttg gggctacaca gaacttttga
301 atgagatacg caaattctat ttgtgggtct tagatcaaac accctacagt
351 gatctagcaa gagaaggaaa agcaccatat atctcagaga ttgcactcaa
401 gagattatac actggtattg atggcactgc tcgagacctg cacccgtacc
451 tcgcacttat caatgaatca atggaattgg agtgtgatga acctgttaca
501 tttcaaggta aggatgacat agtggatgct ggcaagaaac aagatcaaga
551 gaaagataag cagcaaccta agtttgataa tccacctcag ttgccgccac
601 aggacaagac agcgaagcca gatcaaccca gttcttcgaa tgtgaacaaa
651 ccagaccaaa cagtgaagga tcaagatgtg aacgcaggaa cgaaagggat
701 tttgtcagtt cccagattga aaaagcttgg caatgagttg cagttgccaa
751 agtatcaaaa caaaagtgca ataaacctcg attttctgat aacatatgaa
801 ccacaacaag aagacctgtc aaataaacgg tctacggatg atcaatttgc
851 tcagtggttt gagggagttc gagacgagta tggcgtgaca gatgaacaga
901 tgagaatcct acttggtgga ctgatggtgt ggtgcattga aaacggaact
951 tcaccaagca tcaacggaaa ttggatcatg atggatggca atgagcaggt
1001 ttcctacccg ataaaaccat tgctagatca cgccaaacca acctttaggc
1051 aaataatgac aaggttttcg ccattggcgg tagcctacat tacaaaggtg
1101 aatcagaaaa gagcacacat gcctaggtat ggctctcaac gaaacttgac
1151 tgatatgagt ttagcttgtt ttgcgttcga cttttatgaa ataaattcac
1201 gaacgccagc aagagctcgc gaagctcata tgcagatgaa agcggcagcc
1251 attaggaacg ggtcaaaccg aatgtttgga ctcgatggaa atgtcggaac
1301 ccaggtgcaa gacacggaaa ggcacactac aaatgatgtt aaccgtcatg
1351 ttcataatct tgatggtgcg tcaacttggt aggttggatg ccttgtattg
1401 gtaaattata ttactatacc gtagtatctt cccttcagta ctaagcatag
1451 ggtaaagtat catgagtgag gtttcacctc gtttggtacc ttagtatgtc
1501 gaactcattg tgcggacaaa cagtagtgtg actgtgtcac ggtttgttct
1551 gattctgagt gagagaaaga aaaaaaaaaa aaaaaaaaaa a