Sequence of DPV Ranunculus latent virus
Ranunculus latent virus polyprotein gene, partial cds.
ACC No: DQ152193
Dated: 2009-04-22 | Length: 2122 | CRC: 633930721
ID DQ152193; SV 1; linear; genomic RNA; STD; VRL; 2122 BP.
XX
AC DQ152193;
XX
DT 06-SEP-2005 (Rel. 85, Created)
DT 22-APR-2009 (Rel. 100, Last updated, Version 2)
XX
DE Ranunculus latent virus polyprotein gene, partial cds.
XX
KW .
XX
OS Ranunculus latent virus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae.
XX
RN [1]
RP 1-2122
RX PUBMED; 18943173.
RA Turina M., Ciuffo M., Lenzi R., Rostagno L., Mela L., Derin E., Palmano S.;
RT "Characterization of Four Viral Species Belonging to the Family Potyviridae
RT Isolated from Ranunculus asiaticus";
RL Phytopathology 96(6):560-566(2006).
XX
RN [2]
RP 1-2122
RA Turina M., Ciuffo M., Palmano S., Rostagno L.;
RT ;
RL Submitted (02-AUG-2005) to the EMBL/GenBank/DDBJ databases.
RL IVV, CNR, Strada delle Cacce 73, Torino, TO 10135, Italy
XX
FH Key Location/Qualifiers
FH
FT source 1. .2122
FT /organism="Ranunculus latent virus"
FT /isolate="RN128"
FT /mol_type="genomic RNA"
FT /country="Italy"
FT /note="putative macluravirus"
FT /db_xref="taxon:341113"
FT CDS <1. .1856
FT /codon_start=3
FT /product="polyprotein"
FT /note="NIb-CP"
FT /db_xref="GOA:Q3S849"
FT /db_xref="InterPro:IPR007094"
FT /db_xref="UniProtKB/TrEMBL:Q3S849"
FT /protein_id="AAZ79372.1"
FT /translation="HTVGINKFSNGWAKVHEKLNRKGWPHGSGDGSRFDSSIDPFLFDM
FT IYTIRCHFMCDDDKREATRAMSNMFREFVFTPIHTISGNILVKNVGNNSGQPSTVVDNT
FT LVLMLSFYYAYAVKTKDYAFDHIDDRFVFVCNGDDNKFAVSPAFVKEFGGIFTDXIAQL
FT GLNYEFDTLTHDITANPYMSLTMISVCGRIGFQLNPERILGIVQWIKKGGVVHASQAAF
FT AAMIESFNDPDLFSVMHSYLIWLLVTYRQELRYAMHNDLVSVVYMDPAQVFALHYNDEA
FT DHHAWFDEDSIDSSSDDDEDDMQTQELQMNREEIEAVAKKSKKIRLRLRRKNLKKRKLR
FT RGPEKERKASLGPNVTSSSADTSPEKGNEDVSEPQGDPEEKEDDVKWVMPALNPYRGGV
FT VIPTINGKKLWRRGILKHVPKQQYDTTTTKAAQTQLTNWVEAVKKDLRLKDDNAWALVL
FT TVWCIWCADNGTSPEVDTNQELEIHDGLRKVQAVKIDTFVDPALENGGLRKIMRHFSGI
FT TQEILAKGGRMSAYGIKRGFTDKIMIPYAFDFMVADKRTPKAVREQLAQAKIAAIGQGI
FT RRSMITDGGIKGSRVSYERHTDQDQDEFEHGHDFDRRPHLT"
XX
SQ Sequence 2122 BP; 624 A; 456 C; 532 G; 509 T; 1 other;
dq152193 Length: 2122 22-APR-2009 Type: N Check: 1697 ..
1 cacacacagt tggaatcaac aagtttagca acggatgggc gaaagtgcat
51 gagaagctta acagaaaagg atggcctcat gggagtggag atggctcacg
101 gtttgattca tccatcgatc ctttcctctt tgatatgatc tacaccattc
151 gatgtcactt catgtgtgat gatgataaga gggaagcgac acgagctatg
201 tccaatatgt ttcgcgaatt cgtgtttaca ccaatacaca caatcagtgg
251 caacatcttg gtgaagaatg tcgggaacaa cagcgggcaa ccaagcacag
301 tcgttgacaa taccctcgta ctgatgttgt cgttctatta tgcatacgct
351 gtgaaaacga aagattatgc attcgatcac attgatgatc gtttcgtgtt
401 tgtgtgcaat ggggatgaca acaaatttgc agtttcacca gcatttgtga
451 aggagtttgg cgggattttc acggatraaa ttgcacagct cggattgaac
501 tacgagttcg atacactcac acatgacatc acagctaacc catatatgag
551 cttaacgatg atatcagtct gcgggcgcat tggattccag ttaaatcccg
601 agcgaatctt gggaatagtt caatggatta agaaaggagg tgtggttcat
651 gcatcccaag ctgcattcgc tgcaatgatt gagtccttca atgatcctga
701 cttgttcagc gtcatgcatt cctaccttat ctggttactc gtgacgtacc
751 gccaggaact tagatacgca atgcacaatg atcttgtctc tgttgtttac
801 atggatccag cccaagtgtt cgcccttcac tataatgacg aagcagatca
851 ccacgcttgg tttgacgaag attccatcga ctcatcaagt gacgatgatg
901 aggatgacat gcagacgcag gagcttcaga tgaatcgaga agagatagaa
951 gctgttgcaa agaagagcaa gaagataagg ctgcggctgc gaagaaagaa
1001 tctgaagaaa aggaagctga ggagagggcc cgaaaaggaa aggaaagcat
1051 ccctgggccc aaatgtgaca tcgagttcag ccgacacatc ccctgagaaa
1101 ggaaacgagg acgtttctga gccacaaggt gatccagagg agaaggagga
1151 tgatgtgaag tgggtgatgc cagccctcaa tccataccgc ggcggcgttg
1201 tcatcccaac aatcaatggg aagaaactct ggaggagggg aatcttgaaa
1251 cacgtcccaa agcaacaata tgacacaacc accactaagg cggcacaaac
1301 acaactcacg aactgggtgg aagccgtcaa gaaggacttg cgtctcaagg
1351 acgacaatgc atgggcattg gtccttacag tgtggtgcat ctggtgcgcc
1401 gacaatggga catcccccga ggttgatacg aaccaagagc tggaaatcca
1451 cgatggtttg agaaaggtcc aagctgttaa gattgacacg tttgttgatc
1501 cagcgctaga aaatggtggc ctaaggaaaa tcatgcgcca cttctctggc
1551 attacacagg aaatcttagc aaaaggaggt cggatgtcag cttacggcat
1601 caagaggggt ttcaccgata aaattatgat tccctatgct tttgatttca
1651 tggtcgccga caaacgaacg cccaaagctg tgcgagagca gcttgctcaa
1701 gctaagattg ccgcaattgg gcaaggcatc aggcgcagca tgataacgga
1751 tggtggtatc aaggggagca gagtcagtta cgaacgtcac accgaccagg
1801 accaggacga gtttgagcat gggcacgatt ttgatcgacg tcctcatctt
1851 acgtagatat taagttattt tgataacagt caacttaatt taagttcttt
1901 actgctttcc tttattttcg cactttaagg ttcaaatggg ggtttgtgtc
1951 acggttcctc caccgacctg acgtgacgag tgcactgtct atgtcttaaa
2001 taaatcccgc ttaatcctct ctggatgctt agggatctgc attgtctagg
2051 cctgatctgg atggtcggcc gcactttagt gaatcctatt ccgtagaagg
2101 aaaaaaaaaa aaaaaaaaaa aa