Sequence of DPV Turnip mosaic virus

Turnip mosaic virus isolate BJ1 coat protein (CP) mRNA, partial cds.

ACC No: DQ228764

Dated: 2006-06-26 | Length: 867 | CRC: 1012731548

                
ID   DQ228764; SV 1; linear; mRNA; STD; VRL; 867 BP.
XX
AC   DQ228764;
XX
DT   26-JUN-2006 (Rel. 88, Created)
DT   26-JUN-2006 (Rel. 88, Last updated, Version 1)
XX
DE   Turnip mosaic virus isolate BJ1 coat protein (CP) mRNA, partial cds.
XX
KW   .
XX
OS   Turnip mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-867
RA   Zhuang M., Wang X.W., Li Y.S.;
RT   "Cloning and Sequence Analysis of Turnip Mosaic virus Coat Protein Gene";
RL   Zhongguo Shu Cai 3:6-8(2006).
XX
RN   [2]
RP   1-867
RA   Zhuang M., Wang X.;
RT   ;
RL   Submitted (03-OCT-2005) to the EMBL/GenBank/DDBJ databases.
RL   Institute of Vegetables and Flowers, Chinese Academy of Agricultural
RL   Sciences, Zhongguancun South Street 12, Beijing 100081, China
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .867
FT                   /organism="Turnip mosaic virus"
FT                   /specific_host="Brassica oleracea"
FT                   /isolate="BJ1"
FT                   /mol_type="mRNA"
FT                   /country="China"
FT                   /db_xref="taxon:12230"
FT   gene            <1. .>867
FT                   /gene="CP"
FT   CDS             <1. .867
FT                   /codon_start=1
FT                   /gene="CP"
FT                   /product="coat protein"
FT                   /protein_id="ABB58730.1"
FT                   /translation="AGGTLDAGLTDEQKQAEKEKKEREKAEKERERQKQLALKKGKDVA
FT                   QEEGKRDKEVNAGTSGTFSVPRLKSLTSKMRVPRYEQRVALNLDHLILYTPEQTDLSNT
FT                   RSTRKQFDTWFEGVMADYELTEDKMQIILNGLMVWCTENGTSPNINGMWVMMDGDDQVE
FT                   FPIKPLIDHAKPTFRQIMAHFSDVAEAYIEKRNQDQPYMPRYGLQRNLTDMSLARYAFD
FT                   FYEMTSRTPIRAREAHIQMKAAALRGANNNLFGLDGNVGTTVENTERHTTEDVNRNMHN
FT                   LLGVKGL"
XX
SQ   Sequence 867 BP; 284 A; 182 C; 236 G; 165 T; 0 other;

dq228764 Length: 867  26-JUN-2006  Type: N  Check: 7097  ..

       1  gcaggtggga cgcttgatgc gggtttgaca gacgagcaaa agcaggcaga
      51  gaaggagaag aaggagcgag agaaggcaga aaaggaacga gagaggcaga
     101  agcagctggc actcaagaaa ggcaaggatg ttgcacaaga agagggaaaa
     151  cgcgacaagg aagtaaacgc tggaacctct ggaactttca gtgtacccag
     201  acttaagagt ctgacaagca agatgcgcgt gccaagatac gagcaaagag
     251  tggctctaaa tctcgatcat ctaatcctat acacgccgga gcagacggat
     301  ttatccaaca cacgttcaac gcgaaagcag tttgacacat ggtttgaagg
     351  tgtaatggct gactacgaat tgacggagga caaaatgcaa atcattctca
     401  atggtttaat ggtctggtgc actgagaacg gaacctcccc gaacataaac
     451  ggaatgtggg tgatgatgga cggcgatgat caggtggaat tcccgatcaa
     501  accgctcatt gaccacgcca aacccacatt taggcagata atggcccatt
     551  tcagtgacgt agctgaagcg tacattgaaa agcgtaacca agaccaacca
     601  tacatgccac gatatggtct tcagcgcaat ttaaccgaca tgagcttagc
     651  tcgatacgca tttgatttct atgaaatgac ttccaggact ccaatacgtg
     701  cgagagaggc acacatccag atgaaagcag cagcactgcg tggcgcaaat
     751  aataatttgt tcggcttgga tggaaacgtc ggtacaacgg tagagaacac
     801  ggagaggcat acgaccgagg acgttaatcg gaacatgcat aacttacttg
     851  gcgttaaggg gttatga