Sequence of DPV Iris yellow spot virus

Iris yellow spot virus from Imperial Valley, CA nucleoprotein mRNA, complete cds.

ACC No: DQ233475

Dated: 2006-05-17 | Length: 822 | CRC: 1473742351

                
ID   DQ233475   standard; mRNA; VRL; 822 BP.
XX
AC   DQ233475;
XX
SV   DQ233475.1
XX
DT   17-MAY-2006 (Rel. 87, Created)
DT   17-MAY-2006 (Rel. 87, Last updated, Version 1)
XX
DE   Iris yellow spot virus from Imperial Valley, CA nucleoprotein mRNA,
DE   complete cds.
XX
KW   .
XX
OS   Iris yellow spot virus
OC   Viruses; ssRNA negative-strand viruses; Bunyaviridae; Tospovirus.
XX
RN   [1]
RP   1-822
RX   PUBMED; 16320007.
RA   Pappu H.R., du Toit L.J., Schwartz H.F., Mohan S.K.;
RT   "Sequence diversity of the nucleoprotein gene of iris yellow spot virus
RT   (genus Tospovirus, family Bunyaviridae) isolates from the western region of
RT   the United States";
RL   Arch. Virol. 151(5):1015-1025(2006).
XX
RN   [2]
RP   1-822
RA   Pappu H.R., du Toit L.J., Schwartz H.F., Mohan S.K.;
RT   ;
RL   Submitted (07-OCT-2005) to the EMBL/GenBank/DDBJ databases.
RL   Plant Pathology, Washington State University, PO Box 646430, Pullman, WA
RL   99164, USA
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .822
FT                   /organism="Iris yellow spot virus"
FT                   /mol_type="mRNA"
FT                   /country="USA:Imperial Valley, CA"
FT                   /db_xref="taxon:60456"
FT   CDS             1. .822
FT                   /codon_start=1
FT                   /product="nucleoprotein"
FT                   /protein_id="ABB60201.1"
FT                   /translation="MSTARVKASEIERLLSGGDADVVIESDETEGLNFKNFVVANEGIR
FT                   MTFNNGYTILRNRAGIYKTIKSGKFTFQNKPIIIPSANVSPSQDDWTFRRLEGFIRARM
FT                   LVELIDTKNEKEKQKMYEKICGLPLVSAYGLKPKDKFDETTARIMLTLGGPLTLLASLD
FT                   SFAAAALPLAYFQNVKKEALGISRFSTYEQLCKVARVMAAKEFKFTDRYKKIFDETVKI
FT                   LTKCTPGTSGAASLVKFNEQIQILEGAFGKIVEDIGESSKPKNPSKNDRYS"
XX
SQ   Sequence 822 BP; 275 A; 155 C; 181 G; 211 T; 0 other;

dq233475 Length: 822  17-MAY-2006  Type: N  Check: 5966  ..

       1  atgtctactg caagggtaaa agcttcagaa attgagagac ttctctctgg
      51  cggagatgca gatgtggtaa ttgaatctga tgaaactgaa ggactcaatt
     101  tcaagaactt tgtggtggca aatgagggta tccgaatgac attcaataat
     151  ggttacacta ttcttagaaa cagagcaggt atctacaaga caataaaatc
     201  ggggaaattc acattccaaa acaaacccat tattattcct agtgctaatg
     251  tgagtcctag ccaggatgat tggacattta gaaggttaga aggctttatc
     301  agagccagaa tgctggtaga actgattgac acaaagaacg aaaaggaaaa
     351  acagaaaatg tatgaaaaaa tctgcgggct tcctctggta agtgcatatg
     401  gtttgaagcc taaagacaag tttgatgaaa ccacagccag gatcatgtta
     451  acactaggcg gtcctctcac cttactggca agtcttgaca gctttgctgc
     501  agctgctctt cctttagcct atttccagaa tgtgaaaaaa gaagcactcg
     551  gtataagcag attctcaact tatgagcagc tttgcaaagt tgcaagagtc
     601  atggcagcaa aggaattcaa gtttaccgac agatacaaga agatctttga
     651  tgaaactgta aagatcctga ctaaatgcac tcctggaact tcaggtgcag
     701  cttcattggt caagttcaac gaacagatcc aaattcttga aggtgctttc
     751  ggtaagattg ttgaagacat tggtgagtct tctaaaccca agaatccctc
     801  caagaacgac aggtactcat ag