Sequence of DPV Tomato leaf curl Taiwan virus
Tomato leaf curl Taiwan virus isolate BS segment DNA-A, complete sequence.
ACC No: DQ237918
Dated: 2008-05-20 | Length: 2740 | CRC: -805919901
ID DQ237918; SV 1; circular; genomic DNA; STD; VRL; 2740 BP.
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AC DQ237918;
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DT 02-OCT-2006 (Rel. 89, Created)
DT 20-MAY-2008 (Rel. 95, Last updated, Version 2)
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DE Tomato leaf curl Taiwan virus isolate BS segment DNA-A, complete sequence.
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KW .
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OS Tomato leaf curl Taiwan virus
OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus.
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RN [1]
RP 1-2740
RA He Z.F., Yu H., Mao M.J.;
RT "Tomato yellow leaf curl disease in Guangdong is caused by Tomato leaf curl
RT Taiwan virus";
RL Chin. J. Agric. Biotechol. 4(2):127-131(2007).
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RN [2]
RP 1-2740
RA He Z.F., Yu H.;
RT ;
RL Submitted (11-OCT-2005) to the EMBL/GenBank/DDBJ databases.
RL Institute of Plant Protection, Guangdong Academy of Agricultural Sciences,
RL Wushan Road, Tianhe District, Guangzhou, Guangdong 510640, China
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FH Key Location/Qualifiers
FH
FT source 1. .2740
FT /organism="Tomato leaf curl Taiwan virus"
FT /segment="DNA-A"
FT /specific_host="Lycopersicon esculentum (tomato)"
FT /isolate="BS"
FT /mol_type="genomic DNA"
FT /country="China"
FT /virion
FT /db_xref="taxon:196093"
FT gene 132. .473
FT /gene="AV2"
FT CDS 132. .473
FT /codon_start=1
FT /gene="AV2"
FT /product="precoat protein"
FT /db_xref="GOA:Q09M62"
FT /db_xref="InterPro:IPR002511"
FT /db_xref="InterPro:IPR005159"
FT /db_xref="UniProtKB/TrEMBL:Q09M62"
FT /protein_id="ABB69691.1"
FT /translation="MWDPLLNDFPESVHGLRCMLAIKYLHLVENTYSPDTLGYDLIRDL
FT ILVIRARDYVEATRRYSHFHSRFQGSSPSELRQPIWQPCSCPHCPRHKQKEFMGESALV
FT QKAQDVQDV"
FT gene 292. .1065
FT /gene="AV1"
FT CDS 292. .1065
FT /codon_start=1
FT /gene="AV1"
FT /product="capsid protein"
FT /db_xref="GOA:Q072S3"
FT /db_xref="InterPro:IPR000263"
FT /db_xref="InterPro:IPR000650"
FT /db_xref="UniProtKB/TrEMBL:Q072S3"
FT /protein_id="ABB69690.1"
FT /translation="MSKRPADIVISTPASKVRRRLNFASPYGNRVAAPTVLVTNKKSSW
FT VNRPLFRKPRMYRMYKSPDVPRGCEGPCKVQSFEQRHDISHVGKVLCVSDITRGNGLTH
FT RVGKRFCVKSIYVLGKIWMDENIKTKNHTNTVMFFLVRDRRPYGTPQDFGQIFNMYDNE
FT PSTATVKNDNRDRFQVLRRFQATVTGGQYACKEQALVRKFMKINNHVTYNHQEAAKYDN
FT HTENALLLYMACTHASNPVYATLKIRIYFYDSVQN"
FT gene complement(1062. .1466)
FT /gene="AC3"
FT CDS complement(1062. .1466)
FT /codon_start=1
FT /gene="AC3"
FT /product="AC3 protein"
FT /note="enhane replication"
FT /db_xref="InterPro:IPR000657"
FT /db_xref="UniProtKB/TrEMBL:Q072S2"
FT /protein_id="ABB69692.1"
FT /translation="MDSRTGELITAAQAENGVYTWTINNPLYFKITQHNQRPFLRNHDV
FT TTIQVQFNYNLRKALGIHQCFIICQIWTRLQPRTSHFLRVFKYQCMKYLDNLGVISLNN
FT VFRAMRHVLYNVIEGTIDAQFSHIIKFKIY"
FT gene complement(1207. .1614)
FT /gene="AC2"
FT CDS complement(1207. .1614)
FT /codon_start=1
FT /gene="AC2"
FT /product="trap protein"
FT /note="likely involved in regulation of CP gene expression"
FT /db_xref="GOA:Q072S1"
FT /db_xref="InterPro:IPR000942"
FT /db_xref="UniProtKB/TrEMBL:Q072S1"
FT /protein_id="ABB69693.1"
FT /translation="MQNSSPSPSHSTHVPIKVQHKIAKKRPIRRRRVDLHCGCSYYLGI
FT NCASHGFSHRGTHHCSSSREWRVYLDNQQSPLFQNNTTQPETISTEPRRNDNTSSIQLQ
FT PEESVGNTPVFYNLPDLDSFTTSDLAFLEGI"
FT gene complement(1514. .2602)
FT /gene="AC1"
FT CDS complement(1514. .2602)
FT /codon_start=1
FT /gene="AC1"
FT /product="Rep protein"
FT /db_xref="GOA:Q072S0"
FT /db_xref="InterPro:IPR001191"
FT /db_xref="InterPro:IPR001301"
FT /db_xref="UniProtKB/TrEMBL:Q072S0"
FT /protein_id="ABB69694.1"
FT /translation="MPPLNKFRINAKNYFLTYPHCSLTKEEALSQIQALQTPTNKLFIR
FT VCRELHEDGTPHLHILVQFEGKFQCKNNRFFDLTSPTRSAHFHPNIQGAKSSTDVKTYM
FT EKDGDVLDHGIFQVDGRSTRGGCQSANDAYAEAINSGSKAEALNILREKAPKDFVLQFH
FT NLNSNLDRIFTPPLEVYISPFNFSSFDQVPRELVKWVAENVRDSAARPWRPMSIVVEGE
FT SRTGKTLWARSLGPHNYLCGHLDLSPRVYSNEAWYNVIDDVDPHYLKHFKEFMGAQRDW
FT QSNTKYGKPIQIKGGIPTIFLCNPGPTSSYKEYLDEEKNFALKDWALKNAEFITLTEPL
FT YSRANQGPTQNSEEETNSQAEG"
FT gene complement(2152. .2445)
FT /gene="AC4"
FT CDS complement(2152. .2445)
FT /codon_start=1
FT /gene="AC4"
FT /product="AC4 protein"
FT /db_xref="InterPro:IPR002488"
FT /db_xref="UniProtKB/TrEMBL:Q072R9"
FT /protein_id="ABB69695.1"
FT /translation="MGLLTCTFSSNSKENSNVKITDSSTSHPQPGQHISIRTFRELRAQ
FT QMSKPIWRKTETCLIMEFSRSMEDQLEEVANLQTTHMPRQSIQGPKLRPSIY"
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SQ Sequence 2740 BP; 726 A; 537 C; 608 G; 869 T; 0 other;
dq237918 Length: 2740 20-MAY-2008 Type: N Check: 9061 ..
1 accggatggc cgcgaatttt ttaagtgggt cctacgcact aatgttggtc
51 ggccaataga aacgctccct caaagcttat taacaaaaat acccgttata
101 aatacttggt ggctaagtta cagtcggtaa aatgtgggat ccacttttaa
151 atgattttcc ggagtctgta catggtctac gatgtatgct tgccattaag
201 tatctacatc ttgtagaaaa tacatattcc ccggatactt tgggttacga
251 tcttatacgt gatttgattt tagttatccg agctagggat tatgtcgaag
301 cgacccgccg atatagtcat ttccactccc gcttccaagg ttcgtcgccg
351 tctgaacttc gccagcccat atggcaaccg tgtagctgcc cccactgtcc
401 tcgtcacaaa caaaaagagt tcatgggtga atcggccctt gttcagaaag
451 cccaggatgt acaggatgta taaaagccca gatgttcctc gtggttgtga
501 aggcccatgt aaggtacagt catttgaaca gcgtcatgat atatcccatg
551 tgggcaaggt attatgtgtg tccgatatca cacgtggtaa tgggctgacc
601 catcgtgttg ggaagaggtt ttgtgttaag tccatttatg tgttgggtaa
651 gatatggatg gatgagaata tcaagacgaa gaatcacaca aatactgtga
701 tgttcttctt agtccgtgat agaaggcctt atggtactcc acaagatttc
751 ggtcagatct ttaatatgta tgataatgag cctagcactg caacggtgaa
801 gaatgataat agagataggt ttcaagttct ccgtcgattc caggctacgg
851 tgactggcgg tcagtatgcg tgcaaagaac aggctctagt taggaagttt
901 atgaaaatca acaaccatgt tacttataat caccaagagg ctgctaaata
951 cgataaccat acagagaatg ctttgttgtt gtatatggca tgtactcatg
1001 ccagtaatcc tgtgtatgct actttgaaaa tcagaatcta tttctatgat
1051 tctgttcaaa attaataaat tttaaatttt attatatgtg aaaactgagc
1101 atcgattgtg ccctctatta cattgtatag tacatgtctc attgctctaa
1151 atacattgtt taaactaata acgcctaaat tgtctaaata cttcatacat
1201 tggtacttaa ataccctcaa gaaatgcgag gtccgaggtt gtaaacgagt
1251 ccaaatctgg caaattataa aacactggtg tattcccaac gctttcctca
1301 ggttgtagtt gaattgaact tgtattgtcg ttacgtcgtg gttccgtaga
1351 aatggtctct ggttgtgttg tgttattttg aaatagaggg gattgttgat
1401 tgtccaggta tacacgccat tctctgcttg agctgcagtg atgagttccc
1451 ctgtgcgaga atccatgtga tgcgcagtta attccaagat aatacgagca
1501 cccacaatga agatcaaccc tccgcctgcg aattggtctc ttcttcgcta
1551 ttttgtgttg gaccttgatt ggcacgtgag tagagtggct cggtgagggt
1601 gatgaattct gcattcttta aagcccagtc tttgagtgcg aaattctttt
1651 cttcgtctaa gtactcttta tatgatgatg ttggccctgg attgcaaagg
1701 aagattgttg ggataccacc tttaatttga attggtttcc cgtatttggt
1751 gttgctttgc cagtcccttt gggcccccat gaattcttta aagtgcttta
1801 gatagtgggg atcgacgtca tcaatgacgt tataccatgc ctcattgctg
1851 tacactcttg ggcttaggtc aagatgacca cacaagtaat tgtgtgggcc
1901 tagagacctg gcccaaagtg tcttcccagt acgactctca ccctctacaa
1951 caatactcat gggtctccat ggccgcgcag cggaatccct cacgttctcg
2001 gcaacccatt ttacaagttc tcttggaact tgatcaaatg aagaaaaatt
2051 aaaaggagaa atataaacct ccaaaggagg tgtaaaaatt ctatctaaat
2101 tactatttaa attatgaaac tgtaaaacaa aatctttggg agctttctcc
2151 cttaatatat tgagggcctc agctttggac cctgaattga ttgcctcggc
2201 atatgcgtcg tttgcagatt ggcaacctcc tctagttgat cttccatcga
2251 cctggaaaat tccatgatca agcacgtctc cgtctttctc catataggtt
2301 ttgacatctg ttgagctctt agctccctga atgttcggat ggaaatgtgc
2351 tgacctggtt ggggatgtga ggtcgaagaa tctgttattt ttacattgga
2401 attttccttc gaattggacg agaatgtgca ggtgaggagt cccatcttcg
2451 tgaagctctc tgcaaaccct aatgaatagc ttatttgttg gggtttgtag
2501 agcttgtatt tgggaaagtg cctcttcttt ggttagggag cagtgtggat
2551 acgtgaggaa gtagttcttt gcatttatcc tgaatttatt aagtggaggc
2601 atgttgactt agtcaattgg tgtctctcaa acttctctat gtatcggtgt
2651 attggggtct tatttatact tggacactaa atggcattta tgtaattaca
2701 ttaatatacc aaggggtaaa gcggccatcc gtttaatatt