Sequence of DPV Barley yellow dwarf virus-PAV

Barley yellow dwarf virus - PAV WA95 coat protein (ORF3) gene, complete cds.

ACC No: DQ285673

Dated: 2006-09-14 | Length: 603 | CRC: 328953512

                
ID   DQ285673; SV 1; linear; genomic RNA; STD; VRL; 603 BP.
XX
AC   DQ285673;
XX
DT   30-NOV-2005 (Rel. 86, Created)
DT   14-SEP-2006 (Rel. 89, Last updated, Version 3)
XX
DE   Barley yellow dwarf virus - PAV WA95 coat protein (ORF3) gene, complete
DE   cds.
XX
KW   .
XX
OS   Barley yellow dwarf virus - PAV
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Luteoviridae;
OC   Luteovirus.
XX
RN   [1]
RP   1-603
RX   PUBMED; 16963766.
RA   Hall G.;
RT   "Selective constraint and genetic differentiation in geographically distant
RT   barley yellow dwarf virus populations";
RL   J. Gen. Virol. 87(PT 10):3067-3075(2006).
XX
RN   [2]
RP   1-603
RA   Hall G.S.;
RT   ;
RL   Submitted (08-NOV-2005) to the EMBL/GenBank/DDBJ databases.
RL   Ecology and Evolutionary Biology, Cornell Univerisity, Tower Rd., Ithaca,
RL   NY 14853, USA
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .603
FT                   /organism="Barley yellow dwarf virus - PAV"
FT                   /isolate="WA95"
FT                   /serotype="PAV"
FT                   /mol_type="genomic RNA"
FT                   /country="USA"
FT                   /db_xref="taxon:12040"
FT   gene            1. .603
FT                   /gene="ORF3"
FT   CDS             1. .603
FT                   /codon_start=1
FT                   /gene="ORF3"
FT                   /product="coat protein"
FT                   /note="viral capsid protein"
FT                   /db_xref="GOA:Q2V8U4"
FT                   /db_xref="InterPro:IPR001517"
FT                   /db_xref="UniProtKB/TrEMBL:Q2V8U4"
FT                   /protein_id="ABB88865.1"
FT                   /translation="MNSVGRRGPRRANQNGTRRRRRRTVRPVVVVQPNRAGPRRRNGRR
FT                   KGRGGANPVFRPTGGTEVFVFSVDNLKANSSGAIKFGPSLSQCPALSDGILKSYHRYKI
FT                   TSIRVEFKSHASATTAGAIFIELDTACKQSALGSYINSFTISRTASKVFRAEAINGKEF
FT                   QESTIDQFWMLYKANGTTTDTAGQFIITMSVSLMTAK"
XX
SQ   Sequence 603 BP; 179 A; 154 C; 149 G; 121 T; 0 other;

dq285673 Length: 603  14-SEP-2006  Type: N  Check: 7736  ..

       1  atgaattcag taggtcgtag aggacctaga cgcgcaaatc aaaatggcac
      51  aagaaggagg cgccgtagaa cagttcggcc agtggttgtg gtccaaccca
     101  atcgagcagg acccagacga cgaaatggtc gacgcaaggg aagaggaggg
     151  gcaaatcctg tatttagacc aacaggcggg actgaggtat tcgtattctc
     201  agtcgacaac cttaaagcca actcttccgg ggcaatcaaa ttcggcccca
     251  gtctatcgca atgcccagcg ctttcagacg gaatacttaa gtcctaccac
     301  cgttacaaga tcacaagtat ccgtgttgag tttaagtcac acgcgtccgc
     351  aactacggcc ggcgctatct ttattgaact cgacaccgcg tgcaaacaat
     401  cagccctggg tagctacatt aattccttca caatcagcag gaccgcctca
     451  aaggtcttca gagccgaagc gattaacggg aaggaattcc aggaatcaac
     501  gatagaccag ttttggatgc tctacaaggc caatggaacc accactgaca
     551  cggcaggaca attcattatc acgatgagtg tcagtttgat gacggccaaa
     601  tag