Sequence of DPV Barley yellow dwarf virus-PAS

Barley yellow dwarf virus - PAS WG13 coat protein (ORF3) gene, complete cds.

ACC No: DQ285676

Dated: 2006-09-14 | Length: 603 | CRC: -1326217368

                
ID   DQ285676; SV 1; linear; genomic RNA; STD; VRL; 603 BP.
XX
AC   DQ285676;
XX
DT   30-NOV-2005 (Rel. 86, Created)
DT   14-SEP-2006 (Rel. 89, Last updated, Version 3)
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DE   Barley yellow dwarf virus - PAS WG13 coat protein (ORF3) gene, complete
DE   cds.
XX
KW   .
XX
OS   Barley yellow dwarf virus - PAS
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Luteoviridae;
OC   Luteovirus.
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RN   [1]
RP   1-603
RX   PUBMED; 16963766.
RA   Hall G.;
RT   "Selective constraint and genetic differentiation in geographically distant
RT   barley yellow dwarf virus populations";
RL   J. Gen. Virol. 87(PT 10):3067-3075(2006).
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RN   [2]
RP   1-603
RA   Hall G.S.;
RT   ;
RL   Submitted (08-NOV-2005) to the EMBL/GenBank/DDBJ databases.
RL   Ecology and Evolutionary Biology, Cornell Univerisity, Tower Rd., Ithaca,
RL   NY 14853, USA
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FH   Key             Location/Qualifiers
FH
FT   source          1. .603
FT                   /organism="Barley yellow dwarf virus - PAS"
FT                   /isolate="WG13"
FT                   /serotype="PAS"
FT                   /mol_type="genomic RNA"
FT                   /country="USA"
FT                   /db_xref="taxon:228581"
FT   gene            1. .603
FT                   /gene="ORF3"
FT   CDS             1. .603
FT                   /codon_start=1
FT                   /gene="ORF3"
FT                   /product="coat protein"
FT                   /note="viral capsid protein"
FT                   /db_xref="GOA:Q2V8U0"
FT                   /db_xref="InterPro:IPR001517"
FT                   /db_xref="UniProtKB/TrEMBL:Q2V8U0"
FT                   /protein_id="ABB88868.1"
FT                   /translation="MNSVGRRGPRRANQNGPRRRSRRTIRPVVVVQPNRAGPRRRNGRR
FT                   SGRRGPNSIPGSTGRTEVFIFSVDNLKANSSGTIKFGPSLSQCPALSDGILKSYHRYKI
FT                   TSIRVEFKSHASATTSGAIFVELDTACKQSALGSYINSFTISKTASKSFRAEAINGKEF
FT                   QESTIDQFWLLYKANGTTTDTAGQFIIKINVSMLTPK"
XX
SQ   Sequence 603 BP; 185 A; 157 C; 134 G; 127 T; 0 other;

dq285676 Length: 603  14-SEP-2006  Type: N  Check: 8502  ..

       1  atgaattcag taggtcgtag aggacctaga cgagcaaatc aaaatggccc
      51  aagaaggcgg agccgtagaa caattcggcc agtggttgtg gtccaaccca
     101  atcgagcagg acccagacga cgaaatggtc gacgctcagg aagaagaggg
     151  ccaaattcta tacctggatc aacaggcagg actgaggtat tcatattctc
     201  agtcgacaac cttaaagcca actcttccgg gacaatcaaa ttcggtccca
     251  gtttatcgca atgcccagcg ctttcagacg gaatacttaa gtcctaccac
     301  cgttacaaga tcacaagtat ccgtgttgag tttaagtcac acgcgtccgc
     351  cactacgtcg ggcgctatct ttgttgaact cgacaccgcg tgcaagcaat
     401  cagccctggg tagctacatt aattccttca ccatcagcaa aactgcctcc
     451  aagtccttca gagccgaggc gattaatggg aaggaattcc aagaatcaac
     501  gatagaccaa ttctggctac tctacaaggc aaatgggacc actactgaca
     551  ccgctggaca gttcatcata aaaataaacg tcagtatgtt aactcccaaa
     601  tag