Sequence of DPV Barley yellow dwarf virus-PAS

Barley yellow dwarf virus - PAS WS5003 coat protein (ORF3) gene, complete cds.

ACC No: DQ285681

Dated: 2006-09-14 | Length: 603 | CRC: 116580606

                
ID   DQ285681; SV 1; linear; genomic RNA; STD; VRL; 603 BP.
XX
AC   DQ285681;
XX
DT   30-NOV-2005 (Rel. 86, Created)
DT   14-SEP-2006 (Rel. 89, Last updated, Version 3)
XX
DE   Barley yellow dwarf virus - PAS WS5003 coat protein (ORF3) gene, complete
DE   cds.
XX
KW   .
XX
OS   Barley yellow dwarf virus - PAS
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Luteoviridae;
OC   Luteovirus.
XX
RN   [1]
RP   1-603
RX   PUBMED; 16963766.
RA   Hall G.;
RT   "Selective constraint and genetic differentiation in geographically distant
RT   barley yellow dwarf virus populations";
RL   J. Gen. Virol. 87(PT 10):3067-3075(2006).
XX
RN   [2]
RP   1-603
RA   Hall G.S.;
RT   ;
RL   Submitted (08-NOV-2005) to the EMBL/GenBank/DDBJ databases.
RL   Ecology and Evolutionary Biology, Cornell Univerisity, Tower Rd., Ithaca,
RL   NY 14853, USA
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FH   Key             Location/Qualifiers
FH
FT   source          1. .603
FT                   /organism="Barley yellow dwarf virus - PAS"
FT                   /isolate="WS5003"
FT                   /serotype="PAS"
FT                   /mol_type="genomic RNA"
FT                   /country="USA"
FT                   /db_xref="taxon:228581"
FT   gene            1. .603
FT                   /gene="ORF3"
FT   CDS             1. .603
FT                   /codon_start=1
FT                   /gene="ORF3"
FT                   /product="coat protein"
FT                   /note="viral capsid protein"
FT                   /db_xref="GOA:Q2V8T6"
FT                   /db_xref="InterPro:IPR001517"
FT                   /db_xref="UniProtKB/TrEMBL:Q2V8T6"
FT                   /protein_id="ABB88873.1"
FT                   /translation="MDSVGRRGPRRANQNGPRRRSRRSIRPVVVVQPNRAGPRRRNGRR
FT                   SGRRGPNSIPGSTGRTEVFIFSVDNLKANSSGTIKFGPSLSQCPALSDGILKSYHRYKI
FT                   TSIRVKFQSHASAATSGAIFVELDTACKQSALGSYINSFTISKSASKSFRAEAINGKEF
FT                   QESTIDQFWLLYKANGTTTDTAGQFIITINVSMLTPK"
XX
SQ   Sequence 603 BP; 180 A; 159 C; 135 G; 129 T; 0 other;

dq285681 Length: 603  14-SEP-2006  Type: N  Check: 9217  ..

       1  atggattcag taggtcgtag aggacctaga cgagcaaatc aaaatggccc
      51  aagaaggcgg agccgtagat caattcggcc agtggttgtg gtccaaccca
     101  atcgagcagg acccagacga cgaaatggtc gacgctcagg aagaagaggg
     151  ccaaattcta tacctggatc aacaggcagg actgaggtat tcatattctc
     201  agtcgacaac cttaaagcca actcttccgg gacaatcaaa ttcggcccca
     251  gtttatcgca atgcccagcg ctttcagacg gaatacttaa gtcctaccac
     301  cgttacaaga tcacaagtat ccgtgttaag tttcagtcac acgcgtccgc
     351  cgctacgtca ggcgctatct ttgttgaact cgacaccgcg tgcaagcaat
     401  cagccttggg tagctacatt aattccttca ccatcagcaa atctgcctcc
     451  aagtccttca gagccgaggc gattaatggg aaggaattcc aagaatcaac
     501  gatagaccaa ttctggctac tctacaaggc aaatgggacc actactgaca
     551  ccgctggaca gttcatcata acgataaacg tcagtatgtt aactcccaaa
     601  tag