Sequence of DPV Grapevine fanleaf virus
Grapevine fanleaf virus isolate DO221 38K (2B) and 56K (2C) genes, partial cds.
ACC No: DQ362920
Dated: 2006-02-08 | Length: 2559 | CRC: -539838646
ID DQ362920 standard; genomic RNA; VRL; 2559 BP.
XX
AC DQ362920;
XX
SV DQ362920.1
XX
DT 08-FEB-2006 (Rel. 86, Created)
DT 08-FEB-2006 (Rel. 86, Last updated, Version 1)
XX
DE Grapevine fanleaf virus isolate DO221 38K (2B) and 56K (2C) genes, partial
DE cds.
XX
KW .
XX
OS Grapevine fanleaf virus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Comoviridae;
OC Nepovirus; Subgroup A.
XX
RN [1]
RP 1-2559
RA Terlizzi F., Biolchini L., Credi R.;
RT "Molecular characterization of Italian GFLV isolates";
RL Unpublished.
XX
RN [2]
RP 1-2559
RA Terlizzi F., Biolchini L., Credi R.;
RT ;
RL Submitted (12-JAN-2006) to the EMBL/GenBank/DDBJ databases.
RL Department of Agroenvironmental Sciences and Technology, University of
RL Bologna, Viale Fanin 40, Bologna, Bo 40127, Italy
XX
FH Key Location/Qualifiers
FH
FT source 1. .2559
FT /country="Italy:Piemonte"
FT /db_xref="taxon:12274"
FT /mol_type="genomic RNA"
FT /organism="Grapevine fanleaf virus"
FT /isolate="DO221"
FT /specific_host="V. rupestris St. George/Dolcetto"
FT /segment="RNA2"
FT gene <1. .>1044
FT /gene="2B"
FT CDS <1. .>1044
FT /codon_start=1
FT /note="movement protein"
FT /gene="2B"
FT /product="38K"
FT /protein_id="ABC96660.1"
FT /translation="ADGRTTGGQTIAQEADPLQHRVSTSVAPGRVQWISERRQALRRRE
FT QANSLQGLAAQTDMTFEQARNAYLGAADMIEQGLPLLPPLRSAYAPRGLWRGPSTRANY
FT TLDFRLNGIPTGTNTLEILYNPVSEEEMEEYRDRGMSAVVIDALEIAINPFGMPGNPTD
FT LTVVATYGHERDMTRAFIGSASTFLGNGLARAIFFPGLQYSQEEPRRESIIRLYVASTN
FT ATVDTDSVLAAISVGTLRQHVGSMHYRTVASAVHQAQVQGTTLRATMMGNTVVVSPEGS
FT LVAGTPEARVEIGGGSSIRMVGPLQWESVEEPGQTFSIRSRSRSVRIDRNVDLPQLEAE
FT PRLSSTVR"
FT gene <1045. .2559
FT /gene="2C"
FT CDS <1045. .2559
FT /codon_start=1
FT /note="coat protein"
FT /gene="2C"
FT /product="56K"
FT /protein_id="ABC96661.1"
FT /translation="GLAGRGVIYIPKDCQANRYLGTLNIRDMISDFKGVQYEKWITAGL
FT VMPTFKVVIRLPANAFTGLTWVMSFDAYNRITSRITASADPIYTLSVPHWLIHHKLGTF
FT TCEIDYGELCGHAMWFKSTTFESPRLHFTCLTGNNKELAADWHAVVELYAELEEATSFL
FT GKPTLVFDPSVFNGKFQFLTCPPIFFDLTAVTALRSAGLTLGQVPMVGTTKVYNLNSAL
FT VSCVLGMGGTIKGRVHICAPIFYSIVLWVVSEWNGTTMDWNELFKYPGVYVEEDGSFEV
FT KIRSPYHRTPARSLAGQNQRDMSSLNFYAIAGPIAPSGETARLPVVVQIDEIVRPDLSL
FT PSFEDDYFVWVDFSEFTLDKEEIEIGSRFFDFTSNTCRVSMGENPFAAMIACRGLHSGV
FT LDLKLQWSLITEFGKSSGSVTITKLVGDKATGLDGPSQVIAMQKLEGITELLIGNFAGA
FT NPNTHFSLYSRWMAIKLDQAKSIKVLRVLCRPRPGFSFYGRTSFPV"
XX
SQ Sequence 2559 BP; 649 A; 524 C; 667 G; 719 T; 0 other;
dq362920 Length: 2559 08-FEB-2006 Type: N Check: 6029 ..
1 gcggatggaa gaactaccgg agggcaaacg attgctcaag aagctgaccc
51 tttgcaacat agggtcagta cttcagtagc ccctggtagg gtacaatgga
101 tctctgagcg cagacaagct ctgcggagga gagagcaggc aaacagcctg
151 cagggtcttg ccgctcaaac tgacatgact tttgagcagg ccaggaatgc
201 ttatcttggt gctgccgata tgattgagca aggcctaccg ctgcttcccc
251 ctctgcgcag cgcctatgcc cctaggggtt tgtggagggg accttctacc
301 agagccaatt acacgctaga ttttaggctc aatggtatac cgactgggac
351 aaacacattg gaaattttgt ataatcctgt gtcggaagag gagatggaag
401 agtaccggga tagaggtatg tcagccgtgg tgatagatgc gctagaaata
451 gccataaatc cttttggcat gcctggtaat ccgacggact tgactgtcgt
501 ggcaacatat gggcatgagc gtgacatgac acgcgccttc attggatctg
551 cttctacatt cctggggaat ggattagcca gagctatttt cttccctggt
601 ttgcaatata gccaggagga accaaggcgc gaatctataa ttcgccttta
651 tgttgcttca accaatgcca ccgtggatac cgattcagtc ttggctgcca
701 ttagtgttgg cactttgcgt caacacgttg gttccatgca ctatcgtaca
751 gtggctagtg ccgtgcatca ggcccaggtg cagggaacga cactcagggc
801 caccatgatg ggtaatactg ttgtggtttc acctgaggga agcctagttg
851 ctgggacccc cgaggcaaga gttgaaattg ggggtggttc tagtataagg
901 atggtgggac ctctgcaatg ggagagtgta gaagaaccag ggcaaacctt
951 ctctatcagg agccgctcac ggtctgtgag gattgacaga aatgttgatc
1001 ttcctcaact tgaagctgag cccaggttga gctcaactgt gagaggatta
1051 gctggtagag gggtaatata catccctaag gattgccagg caaatagata
1101 tttgggcact ctgaacatac gcgatatgat ttcagatttt aagggtgttc
1151 aatacgagaa gtggataact gcaggattag tcatgcctac tttcaaagtt
1201 gttattagac tacctgcaaa tgcctttact ggactaacat gggtgatgag
1251 ctttgatgct tataatcgga taactagcag gatcactgct agtgcagatc
1301 ccatatacac cttgtcagtt ccacattggc ttatccatca taagttgggc
1351 acgtttacgt gtgagataga ctatggagaa ttgtgtggtc atgcaatgtg
1401 gttcaaatcc acaacatttg aatctcctag gttacatttc acgtgtctaa
1451 ctggcaacaa taaagagcta gcagcagact ggcatgctgt tgttgagctt
1501 tatgcagaat tggaagaggc tacttctttc cttgggaaac cgactttggt
1551 ttttgaccca agtgttttca atggcaaatt tcaatttctg acttgccctc
1601 ccatattctt tgatctaaca gccgtcacgg ctcttaggag tgctggactg
1651 accttgggac aggttccgat ggttggtact acaaaggttt ataacttaaa
1701 cagtgctctt gtgagttgtg ttttgggtat gggaggtact attaagggac
1751 gggtgcacat ttgtgcccca atcttttata gtattgtttt gtgggttgtt
1801 agtgagtgga acgggaccac tatggattgg aatgaactct ttaagtatcc
1851 cggggtgtat gtggaagaag atgggagttt tgaggttaag atccgctctc
1901 catatcaccg gactcctgct agatcgctcg ctggtcaaaa tcagagggac
1951 atgagctctc tgaattttta tgcaatagca ggacctattg ctccttctgg
2001 tgaaaccgca cgacttcctg ttgttgtaca aattgacgag atcgtgcgcc
2051 cagacctctc tctaccaagt tttgaagatg attatttcgt ttgggtggat
2101 ttttctgagt tcaccctaga caaagaagaa atagagattg gatctcgttt
2151 ctttgatttt acttcaaata cttgtagagt ttcgatggga gaaaatccat
2201 ttgctgcaat gattgcctgt cgtgggttac atagtggtgt gttggacctt
2251 aaactccagt ggagtctgat caccgaattt ggcaagagca gcgggagcgt
2301 tactatcact aagctggttg gtgataaggc tacaggcctg gatggacctt
2351 ctcaagtcat tgccatgcaa aaactagagg gaattacaga gttgttaatt
2401 gggaattttg caggagcaaa ccctaacact catttctccc tctatagtag
2451 atggatggca ataaaattgg accaagcaaa gagtattaaa gtacttcgtg
2501 tcttgtgtag gcctcgtcca ggtttcagtt tctatggaag aaccagcttt
2551 ccagtctag