Sequence of DPV Grapevine fanleaf virus
Grapevine fanleaf virus isolate SG10 38K (2B) and 56K (2C) genes, partial cds.
ACC No: DQ362923
Dated: 2006-02-08 | Length: 2559 | CRC: 432050970
ID DQ362923 standard; genomic RNA; VRL; 2559 BP.
XX
AC DQ362923;
XX
SV DQ362923.1
XX
DT 08-FEB-2006 (Rel. 86, Created)
DT 08-FEB-2006 (Rel. 86, Last updated, Version 1)
XX
DE Grapevine fanleaf virus isolate SG10 38K (2B) and 56K (2C) genes, partial
DE cds.
XX
KW .
XX
OS Grapevine fanleaf virus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Comoviridae;
OC Nepovirus; Subgroup A.
XX
RN [1]
RP 1-2559
RA Terlizzi F., Biolchini L., Credi R.;
RT "Molecular characterization of Italian GFLV isolates";
RL Unpublished.
XX
RN [2]
RP 1-2559
RA Terlizzi F., Biolchini L., Credi R.;
RT ;
RL Submitted (12-JAN-2006) to the EMBL/GenBank/DDBJ databases.
RL Department of Agroenvironmental Sciences and Technology, University of
RL Bologna, Viale Fanin 40, Bologna, Bo 40127, Italy
XX
FH Key Location/Qualifiers
FH
FT source 1. .2559
FT /country="Italy:Emilia Romagna"
FT /db_xref="taxon:12274"
FT /mol_type="genomic RNA"
FT /organism="Grapevine fanleaf virus"
FT /isolate="SG10"
FT /specific_host="V. vinifera/Sangiovese"
FT /segment="RNA2"
FT gene <1. .>1044
FT /gene="2B"
FT CDS <1. .>1044
FT /codon_start=1
FT /note="movement protein"
FT /gene="2B"
FT /product="38K"
FT /protein_id="ABC96666.1"
FT /translation="ADGRTTGGQTIAQEADPLQHRVSTSVAPGRAQWISERRQALRRRE
FT QANSLQGLAAQTDMTFEQARNAYLGAADMIEQGLPLLPPLRSAYAPRGLWRGPSTRANY
FT TLDFRLNGIPTGTNTLEILYNPVSEEEMEEYRDRGMSAVVIDALEIAINPFGMPGNPTD
FT LTVVATYGHERDMTRAFIGSASTFLGNGLARAIFFPGLQYSQEEPRRESIIRLYVASTN
FT ATVDTDSVLAAISVGTLRQHVGSMHYRTVASTVHQAQVQGTTLRATMMGNTVVVSPEGS
FT LVTGTPEARVEIGGGSSIRMVGPLQWENVEEPGHTFSIRSRSRSVRIDRNVDLPQLEAE
FT PRLSSTVR"
FT gene <1045. .2559
FT /gene="2C"
FT CDS <1045. .2559
FT /codon_start=1
FT /note="coat protein"
FT /gene="2C"
FT /product="56K"
FT /protein_id="ABC96667.1"
FT /translation="GLAGRGVVYIPKDCQANRYLGTLNIRDMISDFKGVQYEKWITAGL
FT VMPTFKIVVRLPANAFTGLTWVMSFDAYNRITSRITVSADPVYTLSVPHWLIHHKLGTF
FT SCEIDYGELCGHAMWFKSTTFESPRLHFTCLTGNNKELAADWQAVVELYAELEEASSFL
FT GKPTLVFDPGVFNGKFQFLTCPPIFFDLTAVTALKSAGLTLGQVPMVGTTKVYNLNSTL
FT VSCVLGMGGTIRGRIHICAPIFYSIVLWVVSERNGTTMDWNELFKYPGVYVEEDGSFEV
FT KIRSPYHRTPARLLAGQSQGNMSSLNFYAIAGPIAPSGETARLPIVVQIDEIVRPDLSL
FT PSFGDDYFVWVDFSEFTLDKEEIEIGSRFFDFTSNTCRVSMGENPFAAMIACHGLHSGV
FT LDLKFQWSLNTEFGKSSGSVTITKLEGDKATGLDGPSCVFAIQKLEGTAELLIGNFAGA
FT NPNTHFSLYSRWMAIKLDQAKSIKVLRVLCKPRPGFSFYGRTSFPV"
XX
SQ Sequence 2559 BP; 672 A; 521 C; 655 G; 711 T; 0 other;
dq362923 Length: 2559 08-FEB-2006 Type: N Check: 3632 ..
1 gcggatggaa ggactaccgg agggcaaacg attgctcaag aagctgatcc
51 cttgcaacat agggtcagta catctgtggc ccccggtagg gcacaatgga
101 tctctgagcg cagacaagct ctgcgaagga gagagcaggc gaatagcttg
151 cagggccttg ctgctcaaac tgatatgact tttgagcagg ccaggaatgc
201 ttatcttggt gctgccgata tgattgaaca aggcctgcca ctactccccc
251 ctctacgtag tgcttatgct cctaggggtt tatggagggg accttctacc
301 agagccaatt acacgctaga tttcaggctc aatggtattc cgactgggac
351 gaacacattg gaaatattgt acaatcccgt gtcggaagaa gagatggagg
401 aataccggga taggggcatg tcagctgtgg tgattgatgc gctagaaata
451 gccataaacc catttggcat gcctggaaat ccaacggacc taaccgtcgt
501 agcaacgtat gggcatgaac gtgatatgac acgtgccttt attggatctg
551 cttccacatt cttagggaat gggctagcta gggccatttt ctttcctggt
601 ttgcaatata gccaggagga accaaggcgc gaatctataa ttcgcctata
651 tgttgcctct actaatgcca ctgtagacac tgattcagtt ctggcagcca
701 ttagtgttgg cactctacgt caacacgttg gctccatgca ttatcgaaca
751 gtggctagta ctgtgcacca ggcccaagtg caaggaacga cactcagggc
801 tactatgatg ggtaatactg ttgtagtatc acctgaagga agtctggtta
851 ctgggacccc tgaagcgaga gttgaaatag ggggtggttc tagtatcagg
901 atggtgggac ctctacaatg ggaaaatgtg gaggaaccgg ggcatacctt
951 ctctattagg agtcgctcgc gatctgtgag gattgataga aatgttgatc
1001 ttccccaact tgaggctgag cccagattga gctcgaccgt gagaggatta
1051 gctggtagag gagtagttta catcccaaag gattgccagg caaacagata
1101 cttgggcact ctgaacatac gtgatatgat ttcagatttt aagggtgtcc
1151 agtatgaaaa gtggataact gcaggattag tcatgcctac tttcaagata
1201 gttgttagac tgcctgcaaa tgcttttaca ggattgacgt gggtaatgag
1251 ctttgatgct tataatcgga taactagcag aatcactgtt agtgcagatc
1301 ctgtatacac cctgtcagtc ccacattggc ttatccatca taagttgggc
1351 acgttttcat gtgagataga ctatggagaa ttgtgtggcc atgccatgtg
1401 gtttaagtcc acgacatttg aatctcctag gttacatttc acgtgcctaa
1451 cgggcaataa caaagagttg gcggcagact ggcaagctgt cgtcgaacta
1501 tatgctgagt tggaagaagc ctcctctttt cttggaaaac caactttggt
1551 ttttgaccca ggcgttttta atggcaaatt ccaattctta acttgccctc
1601 ccatattctt tgatctgaca gccgtcacgg ctcttaagag tgctggattg
1651 actctgggac aagtcccaat ggttggtact accaaggttt ataacctgaa
1701 tagcactctt gtgagttgtg ttttgggtat gggaggtact attagaggaa
1751 ggatacacat ctgtgctcca atcttctata gtattgtttt atgggttgtc
1801 agtgagcgga acgggaccac tatggattgg aatgaacttt tcaagtatcc
1851 cggggtgtat gtggaagagg atggaagttt tgaagttaaa attcgctctc
1901 catatcaccg aacacctgct agactgcttg ctggccaaag ccagggaaat
1951 atgagctctc tgaattttta tgcaatagca ggacccatag ctccatcggg
2001 tgagactgca cgacttccaa ttgttgtgca aattgatgaa attgtgcgcc
2051 cagatttatc tttgccaagt tttggagatg attattttgt atgggtggat
2101 ttttctgagt tcactctaga caaagaagaa attgagattg gttcgcgttt
2151 ctttgatttc acttcaaata cttgtagagt atctatggga gaaaacccgt
2201 ttgctgcgat gattgcctgc catggattac atagtggtgt tttagacctc
2251 aaatttcaat ggagtctaaa caccgaattt ggcaagagca gtgggagcgt
2301 cactatcacg aagctggagg gtgacaaagc tacgggtctg gacggccctt
2351 cttgtgtttt tgccatacaa aaactagagg gaacagcaga attgctaatt
2401 gggaattttg caggagcaaa cccaaacact catttttccc tatatagtcg
2451 atggatggca attaaactag accaggcaaa gagtattaag gtactccgtg
2501 ttttgtgtaa gcctcgtcca ggtttcagtt tttatggaag aactagcttc
2551 ccagtctag