Sequence of DPV Grapevine fanleaf virus
Grapevine fanleaf virus isolate SG12 38K (2B) and 56K (2C) genes, partial cds.
ACC No: DQ362925
Dated: 2006-02-08 | Length: 2559 | CRC: -1228805010
ID DQ362925 standard; genomic RNA; VRL; 2559 BP.
XX
AC DQ362925;
XX
SV DQ362925.1
XX
DT 08-FEB-2006 (Rel. 86, Created)
DT 08-FEB-2006 (Rel. 86, Last updated, Version 1)
XX
DE Grapevine fanleaf virus isolate SG12 38K (2B) and 56K (2C) genes, partial
DE cds.
XX
KW .
XX
OS Grapevine fanleaf virus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Comoviridae;
OC Nepovirus; Subgroup A.
XX
RN [1]
RP 1-2559
RA Terlizzi F., Biolchini L., Credi R.;
RT "Molecular characterization of Italian GFLV isolates";
RL Unpublished.
XX
RN [2]
RP 1-2559
RA Terlizzi F., Biolchini L., Credi R.;
RT ;
RL Submitted (12-JAN-2006) to the EMBL/GenBank/DDBJ databases.
RL Department of Agroenvironmental Sciences and Technology, University of
RL Bologna, Viale Fanin 40, Bologna, Bo 40127, Italy
XX
FH Key Location/Qualifiers
FH
FT source 1. .2559
FT /country="Italy:Emilia Romagna"
FT /db_xref="taxon:12274"
FT /mol_type="genomic RNA"
FT /organism="Grapevine fanleaf virus"
FT /isolate="SG12"
FT /specific_host="V. vinifera/Sangiovese"
FT /segment="RNA2"
FT gene <1. .>1044
FT /gene="2B"
FT CDS <1. .>1044
FT /codon_start=1
FT /note="movement protein"
FT /gene="2B"
FT /product="38K"
FT /protein_id="ABC96670.1"
FT /translation="ADGRTTGGQTIAQEADPLQHRVSTSVAPGRVQWISERRQALRRRE
FT QANSLQGLAAQTDMTFEQARNAYLGAADMIEQGLPLLPPLRSAYAPRGLWRGPSTRANY
FT TLDFRLNGIPTGTNTLEILYNPVSEEEMEEYRDRGMSAVVIDALEIAINPFGMPGNPTD
FT LTVVATYGHERDMTRAFIGSASTFLGNGLARAIFFPGLQYSQEEPRRESIIRLYVASTN
FT ATVDTDSVLAAISVGTLRQHVGSMHYRTVASAVHQAQVQGTTLRATMMGNTVVVSPEGS
FT LVTGTPEARVEIGGGSSIRMVGPLQWESVEEPGQTFSIRSRSRSVRIDRNVDLPQLEVE
FT PRLSSTVR"
FT gene <1045. .2559
FT /gene="2C"
FT CDS <1045. .2559
FT /codon_start=1
FT /note="coat protein"
FT /gene="2C"
FT /product="56K"
FT /protein_id="ABC96671.1"
FT /translation="GLAGRGVVYIPKDCQANRYLGTLNIRDMISDFKGVQYEKWITAGL
FT VMPTFKIVVRLPANAFTGLTWVMSFDAYNRITSRITASADPVYTLSVPHWLIHHKLGTF
FT SCEIDYGELCGHAMWFKSTTFESPRLHFTCLTGNNKELAADWQAVVELYAELEEATSFL
FT GRPTLVFDPGVFNGKFQFLTCPPIFFDLTAVTALKSAGLTLGQVPMVGTTRVYNLNSTL
FT ASCVLGMGGTIRGRVHICAPIFYSIVLWVVSEWNGTTMDWNELFKYPGVYVEEDGSFEV
FT KIRSPYHRTPARLLAGQSQRDMSSLNFYAIAGPIAPSGETARLPIVVQIDEIVRPDLSL
FT PSFEDDYFVWVDFSEFTLDKEEIEIGSRFFDFTSSTCRVSMGENPFAAMIACHGLHSGV
FT LDLKLQWSLNTEFGKSSGSVTITKLVGDKAMGLDGPSQVFALQRLEVVTDLLIGNFAGA
FT NPNSHFSLYSRWMAIKLDQAKSIKVLRVLCKPRPGFSFYGRTSFPV"
XX
SQ Sequence 2559 BP; 640 A; 502 C; 678 G; 739 T; 0 other;
dq362925 Length: 2559 08-FEB-2006 Type: N Check: 6334 ..
1 gcggatggga gaactaccgg tgggcaaacg attgctcaag aggctgatcc
51 cttgcaacat agggttagca catcagtagc ccctggtagg gtgcaatgga
101 tctctgaacg cagacaggct ctgcgaagaa gagagcaggc aaacagcctg
151 cagggtcttg ctgctcaaac tgatatgact tttgaacagg ccaggaatgc
201 ttatcttggt gctgctgata tgattgagca aggcttaccg ctgcttcccc
251 ctctgcgcag tgcttatgcc cctaggggct tgtggagggg accctctacc
301 agagccaatt atacgctaga ttttaggctc aatggtattc cgactgggac
351 aaacacattg gaaatattgt acaaccctgt gtcggaagaa gagatggaag
401 agtatcggga taggggcatg tcggctgtgg taattgatgc gctagaaata
451 gccataaacc cgttcggcat gcccgggaat ccaacggact taaccgtcgt
501 ggcaacatat ggacacgagc gtgatatgac acgtgccttt attggttctg
551 cttccacatt cttagggaat gggttagcaa gggccatctt ttttcctggt
601 ttgcaatata gccaggagga accaaggcgc gaatctataa ttcgcctata
651 tgttgcctct actaatgcca ctgtagacac tgattcagtc ttggcagcca
701 ttagtgttgg cactttgcgt caacacgttg gttccatgca ctatcgtaca
751 gtggctagtg ccgtgcacca ggcccaggtg caagggacaa cacttagggc
801 taccatgatg ggtaatactg ttgtggtgtc gcctgaggga agcctagtta
851 ctggaacccc tgaagcgaga gttgaaatag ggggtggttc tagtattagg
901 atggtgggac ctctgcaatg ggagagtgtg gaggaaccag ggcaaacctt
951 ctctatcaga agtcgttcac gatctgtgag gattgataga aatgttgatc
1001 ttcctcaact tgaggttgaa cctagattga gttcaaccgt gagaggatta
1051 gctggtagag gagtggttta tatcccaaag gattgccagg caaacaggta
1101 tttgggcacc ctgaacatac gtgatatgat ttcagatttt aagggtgttc
1151 agtacgaaaa atggataact gcaggactag tcatgcctac ttttaaaata
1201 gttgttaggc tacctgcaaa tgcttttaca gggttgacgt gggtgatgag
1251 ctttgatgct tataatcgga taactagtag aatcactgct agtgcagatc
1301 ctgtatacac cctgtcggtc ccgcattggc ttattcatca taagttgggc
1351 acgttttcat gtgagataga ctacggagaa ttgtgtggtc atgctatgtg
1401 gtttaagtcc actacatttg aatctccgag gttacacttt acgtgcctga
1451 cgggtaataa taaagagtta gcggcagact ggcaagctgt cgttgaacta
1501 tatgccgaat tggaagaggc tacctctttt cttgggagac caactttggt
1551 ttttgaccca ggtgttttta atggcaaatt ccaatttttg acttgccctc
1601 ccatattttt tgatttaaca gccgtcacgg ctcttaagag tgctgggctg
1651 actttgggac aagtcccaat ggtcggcact actagggttt ataatctaaa
1701 tagcactctt gcgagttgtg ttttgggtat gggaggtact attagaggga
1751 gggtgcacat ttgtgcgcca atcttctata gtattgtttt gtgggttgtt
1801 agtgagtgga acgggaccac tatggattgg aatgaacttt tcaagtatcc
1851 cggggtgtat gtggaagaag atgggagttt tgaagttaaa attcgctctc
1901 catatcaccg aacgcctgct agattgcttg ctggtcaaag tcaaagggac
1951 atgagttccc ttaactttta tgcaatagca ggacctattg ctccatcggg
2001 tgagaccgcg cgacttccta ttgttgtaca aattgatgag atcgtgcgcc
2051 cagacctctc tttgccaagt tttgaagatg attattttgt atgggtggat
2101 ttttctgagt tcactcttga caaagaagaa attgagattg gttctcgttt
2151 ctttgatttc acttcaagta cttgtagagt gtctatggga gaaaacccgt
2201 ttgctgctat gattgcctgc catggattgc atagtggtgt attggacctt
2251 aaacttcaat ggagtctgaa cactgaattt ggcaaaagca gtgggagcgt
2301 tactatcacg aagctggtgg gtgataaagc tatgggctta gacggacctt
2351 ctcaggtttt tgccttgcaa agattagagg tagttactga cttgttgatt
2401 gggaattttg caggagcaaa cccaaacagt catttttctc tctatagtcg
2451 ttggatggca attaaattgg atcaggcgaa gagcattaaa gtactccgcg
2501 tcttgtgtaa gcctcgtcca ggtttcagtt tctatggaag aaccagcttc
2551 ccagtctag