Sequence of DPV Grapevine fanleaf virus
Grapevine fanleaf virus isolate SG16 38K (2B) and 56K (2C) genes, partial cds.
ACC No: DQ362926
Dated: 2006-02-08 | Length: 2559 | CRC: 1121712025
ID DQ362926 standard; genomic RNA; VRL; 2559 BP.
XX
AC DQ362926;
XX
SV DQ362926.1
XX
DT 08-FEB-2006 (Rel. 86, Created)
DT 08-FEB-2006 (Rel. 86, Last updated, Version 1)
XX
DE Grapevine fanleaf virus isolate SG16 38K (2B) and 56K (2C) genes, partial
DE cds.
XX
KW .
XX
OS Grapevine fanleaf virus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Comoviridae;
OC Nepovirus; Subgroup A.
XX
RN [1]
RP 1-2559
RA Terlizzi F., Biolchini L., Credi R.;
RT "Molecular characterization of Italian GFLV isolates";
RL Unpublished.
XX
RN [2]
RP 1-2559
RA Terlizzi F., Biolchini L., Credi R.;
RT ;
RL Submitted (12-JAN-2006) to the EMBL/GenBank/DDBJ databases.
RL Department of Agroenvironmental Sciences and Technology, University of
RL Bologna, Viale Fanin 40, Bologna, Bo 40127, Italy
XX
FH Key Location/Qualifiers
FH
FT source 1. .2559
FT /country="Italy:Emilia Romagna"
FT /db_xref="taxon:12274"
FT /mol_type="genomic RNA"
FT /organism="Grapevine fanleaf virus"
FT /isolate="SG16"
FT /specific_host="V. vinifera/Sangiovese"
FT /segment="RNA2"
FT gene <1. .>1044
FT /gene="2B"
FT CDS <1. .>1044
FT /codon_start=1
FT /note="movement protein"
FT /gene="2B"
FT /product="38K"
FT /protein_id="ABC96672.1"
FT /translation="ADGRTTGGQTIAQEADPLQHRVSTSVAPGRAQWISERRQALRRRE
FT QANSLQGLAARTDMTFEQARNAYLGAADMLEQGLPLLPPLRSAYAPRGLWRGPSTRANY
FT TLDFRLNGIPTGTNTLEILYNPVSEEEMEEYRDRGMSAVVIDALELAINPFGMPGNPTD
FT LTVVATYGHERDMTRAFIGSASTFLGNGLARAIFFPGLQYSQEEPRRESIIRLCVASTN
FT ATVDTDSVLAAISVGTLRQHVGSMHYRTVASSVHQAQVQGTTLRATMMGNTVVVSPEGS
FT LVTGTPEARVEIGGGSSIRMVGPLQWESVEEPGQTFSIRSRSRSVRIDRNIDLPQLEAE
FT PRLSSTVR"
FT gene <1045. .2559
FT /gene="2C"
FT CDS <1045. .2559
FT /codon_start=1
FT /note="coat protein"
FT /gene="2C"
FT /product="56K"
FT /protein_id="ABC96673.1"
FT /translation="GLAGRGVVYIPKDCQANRYLGTLNIRDMISDFKGVQYEKWITAGL
FT VMPTFKVVVRLPADAFTGLTWVMSFDAYNRITSRITASADPVYTLSVPHWLIHHKLGTF
FT SCEIDYGELCGHAMWFKSTTFESPRLHFTCLTGNNKELAADWQAVVELYAELEEATSFL
FT GKPTLVFDPGAFDGKFQFLTCPPIFFDLTAVTALKSSGLTLGQVPMVGTTRVYNLNSTL
FT VSCVLGMGGTIRGRVHICAPIFYSIVLWVVSEWNGTTMDWNELFKYPGVYVEEDGSFEV
FT KIRSPYHRTPARLLAGQSQRDMSSLNFYAIAGPIAPSGETARLPIVVQIDEIVRPDLSL
FT PSFEDDYFVWVDFSEFTLDKEEIEIGSRFFDFTSNTCRVSMGENPFAAMIACHGLHSGV
FT LDLKFQWSLNTEFGKSSGSVTITKLVGDKATGLDGPSQVFALQKLEGAADLLIGNFAGA
FT NPNTHFSLYSRWMAIKLDQAKSIKVLRVLCKPRSGFSFYGRTSFPV"
XX
SQ Sequence 2559 BP; 635 A; 522 C; 679 G; 723 T; 0 other;
dq362926 Length: 2559 08-FEB-2006 Type: N Check: 5595 ..
1 gcggatggta gaactaccgg tgggcaaacg attgcccaag aagctgaccc
51 tttgcaacac agggttagca catctgtggc ccccggtagg gcacaatgga
101 tctctgaacg cagacaggct ctgcggagga gagagcaagc gaatagcttg
151 cagggtcttg ctgctcgaac tgatatgact tttgagcagg ctcggaatgc
201 ttatcttggt gctgctgata tgttagagca aggcctacca ctgcttcccc
251 ctctgcgcag tgcttatgcc cctaggggtt tgtggagggg accctcaacc
301 agagccaatt atacgctaga ttttaggctc aatggtattc cgactgggac
351 aaacacgttg gaaatattgt ataatcccgt gtcggaagag gagatggaag
401 agtaccggga taggggtatg tcggctgtgg tgattgatgc gctagaatta
451 gccataaatc cattcggcat gcccggaaac cccacggact taactgtcgt
501 agcaacatat gggcatgagc gtgatatgac acgtgccttt attggttctg
551 cttccacatt cttagggaat gggttggcta gggccatttt ctttcccggt
601 ttgcaatata gccaggagga accaaggcgc gaatctataa ttcgcctatg
651 cgttgcctct acaaatgcca ctgtggatac tgactcagtc ttggcagcca
701 ttagtgtcgg cactctacgt caacacgttg gctccatgca ttatcgaaca
751 gtggctagtt ccgtacacca agcccaggtg caagggacaa cactcagggc
801 cactatgatg ggtaatactg ttgtagtgtc tcctgaagga agcctagtta
851 ctggaactcc tgaagcaaga gttgaaatag ggggtggttc cagtattagg
901 atggtgggtc ctctacaatg ggaaagtgta gaagaaccag ggcaaacctt
951 ctctatcaga agtcgttcgc ggtctgtgag gattgataga aatattgatc
1001 ttcctcaact tgaggctgag cctaggttga gttcgactgt gaggggatta
1051 gctggtaggg gagtggtcta cattcccaag gattgccagg caaatagata
1101 cttgggcacc ttgaacatac gcgatatgat ttcagatttt aagggtgtcc
1151 agtatgaaaa gtggataact gcgggactag tcatgcctac tttcaaagta
1201 gttgtcaggc tacctgcaga tgccttcacg gggttgacat gggtgatgag
1251 ctttgatgct tataatcgga taactagtag aatcactgct agtgcagatc
1301 ctgtatacac cctgtcagtt cctcattggc ttatccacca taagttgggc
1351 acgttttcat gtgagataga ctatggagaa ctgtgtggtc atgctatgtg
1401 gtttaaatct actacatttg aatctccaag actgcacttc acatgtttaa
1451 cgggcaacaa caaagagttg gcggcagact ggcaagctgt cgttgaactg
1501 tatgctgaac tggaagaggc cacttctttc cttgggaaac caactttggt
1551 ttttgaccca ggcgcttttg atggtaaatt ccaattttta acttgccctc
1601 ccatattctt tgatttaaca gctgtcacgg ctcttaagag ttctgggctg
1651 acattgggac aggtcccaat ggttggcact accagggtat ataacctgaa
1701 tagtactctt gtgagttgtg ttttgggcat gggaggtact attagaggaa
1751 gggtacacat ttgtgcgcca atcttctata gtattgtttt gtgggttgtc
1801 agtgagtgga acgggaccac tatggattgg aatgaacttt ttaagtatcc
1851 cggggtgtat gtggaagaag atgggagttt tgaagttaaa attcgctctc
1901 catatcaccg aacgcctgct cgattgcttg ctggtcagag tcaaagggac
1951 atgagttccc ttaactttta tgcaatagca ggacctattg ctccatcggg
2001 tgagaccgcg cgacttccta ttgttgtaca aattgatgag atcgtgcgcc
2051 cagacctctc tttgccaagt tttgaggatg actattttgt atgggtggat
2101 ttttctgagt tcactcttga taaggaagaa attgagattg gttctcgttt
2151 ctttgatttc acctcaaata cttgtagagt gtctatggga gaaaacccgt
2201 ttgctgcaat gattgcctgt catggactgc atagtggtgt attagacctc
2251 aaattccagt ggagtctgaa caccgagttt ggcaagagca gtgggagtgt
2301 tactattacg aagctggttg gcgataaagc cacaggcttg gatgggcctt
2351 cacaagtttt tgccttacaa aaactggagg gagctgcgga tttgctaatt
2401 gggaattttg caggagcaaa cccaaatacg cacttctccc tttatagtcg
2451 atggatggca attaaactgg atcaagctaa gagcattaag gtgctccgag
2501 ttttgtgtaa gcctcgttcg ggtttcagtt tttatggaag aaccagcttt
2551 ccagtctag