Sequence of DPV Grapevine fanleaf virus
Grapevine fanleaf virus isolate MS43 38K (2B) and 56K (2C) genes, partial cds.
ACC No: DQ362927
Dated: 2006-02-08 | Length: 2559 | CRC: 486278166
ID DQ362927 standard; genomic RNA; VRL; 2559 BP.
XX
AC DQ362927;
XX
SV DQ362927.1
XX
DT 08-FEB-2006 (Rel. 86, Created)
DT 08-FEB-2006 (Rel. 86, Last updated, Version 1)
XX
DE Grapevine fanleaf virus isolate MS43 38K (2B) and 56K (2C) genes, partial
DE cds.
XX
KW .
XX
OS Grapevine fanleaf virus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Comoviridae;
OC Nepovirus; Subgroup A.
XX
RN [1]
RP 1-2559
RA Terlizzi F., Biolchini L., Credi R.;
RT "Molecular characterization of Italian GFLV isolates";
RL Unpublished.
XX
RN [2]
RP 1-2559
RA Terlizzi F., Biolchini L., Credi R.;
RT ;
RL Submitted (12-JAN-2006) to the EMBL/GenBank/DDBJ databases.
RL Department of Agroenvironmental Sciences and Technology, University of
RL Bologna, Viale Fanin 40, Bologna, Bo 40127, Italy
XX
FH Key Location/Qualifiers
FH
FT source 1. .2559
FT /country="Italy:Piemonte"
FT /db_xref="taxon:12274"
FT /mol_type="genomic RNA"
FT /organism="Grapevine fanleaf virus"
FT /isolate="MS43"
FT /specific_host="V. rupestris St. George/Moscato"
FT /segment="RNA2"
FT gene <1. .>1044
FT /gene="2B"
FT CDS <1. .>1044
FT /codon_start=1
FT /note="movement protein"
FT /gene="2B"
FT /product="38K"
FT /protein_id="ABC96674.1"
FT /translation="ADGRTTGGQTIAQEADPLQHRVSTSVAPGRAQWISERRQALRRRE
FT QANSLQGLAAQTDMTFEQARNAYLGAADMIEQGLPLLPPLRSAYAPRGLWRGPSTRANY
FT TLDFRLNGIPTGTNTLEILYNPVSEEEMEEYRDRGMSAVVIDALEIAINPFGMPGNPTD
FT LTVVATYGHERDMTRAFIGSASTFLGNGLARAIFFPGLQYSQEEPRRESIIRLYVASTN
FT ATVDTDSVLAAISVGTLRQHVGSMHYRTVASTVHQAQVQGTTLRATMMGNTVVVSPEGS
FT LVAGTPEARVEIGGGSSIRMVGPLQWESVEEPGQTFSIRSRSRSVRVDRNVDLPQLEAE
FT PRLSSTVR"
FT gene <1045. .2559
FT /gene="2C"
FT CDS <1045. .2559
FT /codon_start=1
FT /note="coat protein"
FT /gene="2C"
FT /product="56K"
FT /protein_id="ABC96675.1"
FT /translation="GLAGRGVIYIPKDCQANRYLGTLNIRDMISDFKGVQYEKWITAGL
FT VMPTFKIVIRLPANALTGLTWVMSFDAYNRITSRITTSADPVYTLSVPHWLIHHKLGTF
FT SCEIDYGELCGHAMWFKSTTFESPRLHFTCLTGNNKELAADWQAVVELYAELEEATSFL
FT GKPTLVFDPGVFNGKFQFLTCPPIFFDLTAVTALRSAGLTLGQVPMVGTTKVYNLNSAL
FT VSCVLGMGGTIKGRVHICAPIFYSIVLWVVSEWNGTTMDWNELFKYPGVYVEEDGSFEV
FT KIRSPYHRTPARLLTGQSQRDMSSLNFYAIAGPIAPSGETARLPIVVQIGEIVRPDLSL
FT PSFEDDYFVWVDFSEFTLDKEEIEIGSRFFDFTSNTCRVFMGENPFAAMIACHGLHSGV
FT LDLKLQWSLNTEFGKSSGSVTVTKLVGDKAMGLDGPSQVFALQKLEGATELLIGNFAGA
FT NPNSRFPLYSRWMAIKLDQAKSIKVLRVLCKPRPGFSFYGRTSFPV"
XX
SQ Sequence 2559 BP; 661 A; 538 C; 656 G; 704 T; 0 other;
dq362927 Length: 2559 08-FEB-2006 Type: N Check: 8861 ..
1 gcggatggga ggactaccgg ggggcaaacc attgcccaag aagctgatcc
51 tttacaacat agggtcagca cttcagttgc ccccggtagg gcacaatgga
101 tctctgagcg cagacaagct ctgcggagga gagagcaggc aaatagcttg
151 cagggtcttg ctgctcagac agatatgact ttcgagcagg ccaggaatgc
201 ttatcttggt gctgctgata tgattgagca aggcctacca ctgcttcccc
251 ctctgcgcag cgcttatgcc cctaggggct tgtggagggg accttcaacc
301 agagccaatt atacgttaga ttttaggctc aatggtatac caactgggac
351 gaacacattg gaaattttgt acaatcccgt gtcggaagag gagatggaag
401 agtaccggga caggggcatg tcagctgtgg tgatagatgc gctagaaata
451 gccataaacc catttggtat gcctggtaat ccaacggact tgaccgtcgt
501 agcaacatat gggcatgagc gtgacatgac gcgtgctttc attggatctg
551 cttccacatt cctagggaat gggttagcta gagccatttt ctttcctggt
601 ttgcaatata gccaggagga accaaggcgc gaatctataa ttcgtttata
651 tgttgcctct actaatgcca ctgtagacac tgattcagtt ctggcagcca
701 tcagtgttgg caccttgcgt caacacgttg gctccatgca ctatcgtaca
751 gtggctagca ccgtgcacca ggcccaggtg caaggaacga cactcagggc
801 aactatgatg ggtaatactg ttgtagtgtc acctgaggga agcctggttg
851 ctgggacccc tgaggcaaga gttgaaatag ggggaggttc tagtatcagg
901 atggtgggac ctctgcaatg ggaaagtgta gaggaaccag ggcaaacctt
951 ctctatcaga agtcgctcac gatctgtgag ggttgacaga aatgttgatc
1001 ttcctcaact tgaggctgag cccagattga gctcaaccgt gagaggatta
1051 gctggtagag gagtgatcta tattcccaaa gattgccagg caaataggta
1101 tttgggcacc ctgaacatac gtgatatgat ctctgatttc aagggtgtcc
1151 agtacgaaaa atggataact gcaggattag tcatgcccac ttttaaaata
1201 gttattagac tacctgcaaa tgcccttact ggattgacat gggtaatgag
1251 ctttgatgct tataaccgga taactagtag aattactact agtgctgatc
1301 ctgtatatac cctgtcagtc ccacattggc ttatccatca taagttgggc
1351 acgttttcat gtgagataga ctacggagaa ttgtgtggtc atgctatgtg
1401 gtttaaatcc acaacatttg aatctcctag gctacatttt acgtgcctga
1451 ctggtaacaa taaagagcta gcagcagact ggcaagctgt tgtcgagctt
1501 tatgcagaat tggaagaggc cacttctttc cttgggaaac caactttggt
1551 ttttgaccca ggtgttttta atggtaaatt ccaatttctt acttgccctc
1601 ccatattctt tgatctaaca gccgtaacgg ctcttaggag tgctggactg
1651 acgttgggac aagtcccaat ggttggtact accaaggttt acaacctaaa
1701 cagcgctctt gtgagttgtg ttttgggtat ggggggtact atcaagggaa
1751 gggtgcacat ttgtgctcct atcttttata gtattgttct atgggttgtt
1801 agtgagtgga acgggaccac tatggattgg aatgaacttt ttaaatatcc
1851 cggggtgtat gtggaagagg acggaagttt tgaagttaaa atccgctctc
1901 catatcaccg aacgcctgct agattgctaa ctggtcaaag ccagagggac
1951 atgagctccc taaatttcta tgcaatagca gggcctatcg ctccttcggg
2001 tgagactgcg cgacttccca tcgttgttca gattggcgaa attgtgcgcc
2051 cagatctctc tctaccaagt tttgaagatg attactttgt ttgggtggat
2101 ttttctgaat tcactctaga taaagaagaa attgagattg gatctcgttt
2151 ctttgatttt acttcaaaca cttgcagagt ttttatggga gaaaacccgt
2201 tcgctgcaat gattgcctgc catggattgc atagtggtgt attagacctt
2251 aaactccaat ggagtttaaa caccgaattt ggcaagagca gtgggagcgt
2301 tactgttacg aaactggttg gtgataaagc catgggcctg gacggtcctt
2351 ctcaagtttt tgccttacaa aaactagagg gagccacaga gttgttaatt
2401 gggaactttg caggagcaaa cccaaactct cgtttccccc tttacagtag
2451 atggatggca atcaaactgg atcaagcaaa gagtattaaa gtactccggg
2501 ttctgtgtaa gcctcgtcca ggtttcagct tctatggaag aaccagcttc
2551 ccagtctag