Sequence of DPV Grapevine fanleaf virus
Grapevine fanleaf virus isolate NE83 38K (2B) and 56K (2C) genes, partial cds.
ACC No: DQ362929
Dated: 2006-02-08 | Length: 2559 | CRC: -1497524786
ID DQ362929 standard; genomic RNA; VRL; 2559 BP.
XX
AC DQ362929;
XX
SV DQ362929.1
XX
DT 08-FEB-2006 (Rel. 86, Created)
DT 08-FEB-2006 (Rel. 86, Last updated, Version 1)
XX
DE Grapevine fanleaf virus isolate NE83 38K (2B) and 56K (2C) genes, partial
DE cds.
XX
KW .
XX
OS Grapevine fanleaf virus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Comoviridae;
OC Nepovirus; Subgroup A.
XX
RN [1]
RP 1-2559
RA Terlizzi F., Biolchini L., Credi R.;
RT "Molecular characterization of Italian GFLV isolates";
RL Unpublished.
XX
RN [2]
RP 1-2559
RA Terlizzi F., Biolchini L., Credi R.;
RT ;
RL Submitted (12-JAN-2006) to the EMBL/GenBank/DDBJ databases.
RL Department of Agroenvironmental Sciences and Technology, University of
RL Bologna, Viale Fanin 40, Bologna, Bo 40127, Italy
XX
FH Key Location/Qualifiers
FH
FT source 1. .2559
FT /country="Italy:Piemonte"
FT /db_xref="taxon:12274"
FT /mol_type="genomic RNA"
FT /organism="Grapevine fanleaf virus"
FT /isolate="NE83"
FT /specific_host="V. rupestris St. George/Nebbiolo"
FT /segment="RNA2"
FT gene <1. .>1044
FT /gene="2B"
FT CDS <1. .>1044
FT /codon_start=1
FT /note="movement protein"
FT /gene="2B"
FT /product="38K"
FT /protein_id="ABC96678.1"
FT /translation="ADGRTTGGQTIAQEADPLQHRVSTSVAPGRAQWISERRQALRRRE
FT QANSLQGLAAQTDMTFEQARNAYLGAADMIEQGLPLLPPLCSAYAPRGLWRGPSTRANY
FT TLDFRLNGIPTGTNTLEILYNPVSEEEMEEYRDRGMSAVVIDALEIAINPFGMPGNPTD
FT LTVVATYGHERDMTRAFIGSASTFLGNGLARAIFFPGLQYSQEEPRRESIIRLYVASTN
FT ATVDTDSVLAAISVGTLRQHVGSMHYRTVASTVHQAQVQGTTLRATMMGNTVVVSPEGS
FT LVTGTPEARVEIGGGSSIRMVGPLQWESVEEPGQTFSIRSRSRSVRIDRNVDLPQLEAE
FT PRLSSTVR"
FT gene <1045. .2559
FT /gene="2C"
FT CDS <1045. .2559
FT /codon_start=1
FT /note="coat protein"
FT /gene="2C"
FT /product="56K"
FT /protein_id="ABC96679.1"
FT /translation="GLAGRGVIYIPKDCQANRYLGTLNIRDMISDFKGVQYEKWITAGL
FT VMPTFKIVIRLPANPFTGLTWVMSFDAYNRITSKITTSADPVYTLSVPHWLIHHKLGTF
FT TCEVDYGELCGHAMWFKSTTFESPRLHFTCLTGNNKELAADWQAVVELYAELEEATSFL
FT GKPTLVFDPGVFNGKFQFLTCPPIFFDLTAVTALRSAGLTLGQVPMVGTTKVYNLNSAL
FT VSCVLGMGGTIRGRVHICAPIFYSIVLWVVSEWNGTTMDWNELFKYPGVYVEEDGSFEV
FT KIRSPYHRTPARLLSGQSQRDMSSLNFYAIAGPIAPSGETARLPIVVQIDEIVRPDFSL
FT PSFEDDYFVWVDFSEFTQDKEEIEIGSRFFDFTSNTCRVFMGENPFAAMIACHGLHSGV
FT LDLKLQWSLNTEFGKSSGSVTITKLVGDKAMGLDGPSQVFALQKLEGVTELLIGNFAGA
FT NPNTRFSLYSRWMAIKLDQAKSIKVLRVLCKPRPGFSFYGRTSFPV"
XX
SQ Sequence 2559 BP; 662 A; 517 C; 653 G; 727 T; 0 other;
dq362929 Length: 2559 08-FEB-2006 Type: N Check: 358 ..
1 gcggatggga gaactaccgg ggggcaaaca attgctcaag aagctgatcc
51 cttgcaacat agggtcagca catcagttgc ccccggtagg gcacaatgga
101 tctctgagcg cagacaggct ctgcggagga gagagcaagc aaatagcttg
151 cagggtcttg ctgctcaaac cgatatgact tttgagcagg ccaggaatgc
201 ttatcttggt gctgctgaca tgattgagca aggcctaccg ctgcttcccc
251 ctctatgcag cgcttatgcc cctaggggtt tgtggagggg accctcaacc
301 agagccaatt acacgctaga ttttaggctc aatggtattc cgactgggac
351 aaatacattg gaaatattgt ataatcctgt gtcggaagaa gagatggaag
401 agtaccggga taggggtatg tcagctgtgg taattgatgc tttggaaata
451 gccatcaatc catttggcat gcctggaaat ccaacggact taactgtcgt
501 agcaacatat gggcatgagc gtgatatgac acgtgccttt attggatctg
551 cttccacatt tctgggaaat gggttagcta gagccatctt cttccctggc
601 ttgcaatata gccaggagga accaaggcgt gaatctataa tccgcctgta
651 tgttgcttct actaatgcca ctgtagacac tgattcagtt ttggcagcta
701 ttagtgttgg cactttacgt caacacgttg gctccatgca ctatcgtaca
751 gtggctagca ccgtgcacca agcccaggtg caaggaacga cactcagggc
801 tactatgatg ggtaatactg ttgtagtgtc acctgaagga agcctggtta
851 ctgggacccc tgaagcaaga gttgaaattg ggggtggttc tagtatcagg
901 atggtgggac ctttacaatg ggaaagtgta gaggaaccag ggcaaacctt
951 ctctatcagg agtcgttcac gatctgtgag gattgataga aatgttgatc
1001 ttcctcaact tgaggctgag cccagattga gctcaaccgt gagaggatta
1051 gctggtagag gagtgatcta tattcccaaa gattgccagg caaacaggta
1101 cttgggcacc ctgaatatac gtgatatgat ttcagacttt aagggtgttc
1151 agtatgaaaa gtggataact gcaggattag tcatgccaac tttcaagata
1201 gttattaggc tacctgcaaa cccctttact ggattgacgt gggtgatgag
1251 ctttgatgct tataatcgga taactagtaa aattactact agtgctgatc
1301 ccgtatacac cctatcagtc ccacattggc ttatccacca taagttgggc
1351 acgtttacat gtgaggtaga ttatggagaa ttgtgcggtc atgccatgtg
1401 gtttaagtcc acaacgtttg aatctccgag gctgcacttc acatgtttga
1451 cgggcaacaa caaagagtta gcggcagact ggcaagctgt cgtagaacta
1501 tatgctgaat tggaagaggc cacttctttt cttgggaaac cgactttggt
1551 ttttgaccca ggagttttta atggcaaatt tcaatttctt acttgccccc
1601 ccatattctt tgatctaaca gccgtcacag ctctccggag tgctggactg
1651 acattgggac aagtccccat ggttggtact actaaggttt ataacctaaa
1701 tagcgctctt gtgagttgtg ttttgggtat ggggggtact ataagaggaa
1751 gggtgcacat ttgtgctcct atcttttata gtattgtttt atgggttgtt
1801 agtgagtgga acgggaccac tatggattgg aatgaacttt ttaaatatcc
1851 cggggtgtat gtggaagagg atggaagctt tgaagtcaaa atccgctctc
1901 catatcatcg cacgcctgct agattgctat ctggtcaaag tcaaagggat
1951 atgagttccc taaactttta cgcaatagca gggcctatcg ctccttcggg
2001 tgagaccgca cgacttccca ttgttgttca aatcgatgaa attgtgcgcc
2051 cagacttctc tcttccaagt tttgaggatg attatttcgt ttgggtggat
2101 ttttctgaat tcactcaaga taaagaggaa attgagattg gttctcgttt
2151 ctttgatttt acctcaaata cttgtagagt gtttatggga gaaaacccgt
2201 tcgctgcaat gattgcctgt catggattgc atagtggtgt attagatctc
2251 aagctccaat ggagtttgaa caccgagttt ggcaagagca gtgggagtgt
2301 tactatcaca aagctggttg gtgataaagc catgggcttg gacggacctt
2351 ctcaggtctt tgccttgcaa aaacttgagg gagttacaga attgttaatt
2401 gggaattttg caggagcaaa ccccaacact cgtttctccc tttatagtag
2451 atggatggca attaaactgg atcaagcaaa gagtattaaa gtactccgag
2501 tcttgtgtaa gcctcgtcca ggttttagtt tttatggaag aaccagcttt
2551 ccagtctag