Sequence of DPV Grapevine fanleaf virus
Grapevine fanleaf virus isolate NE185 38K (2B) and 56K (2C) genes, partial cds.
ACC No: DQ362930
Dated: 2006-02-08 | Length: 2559 | CRC: -1611106855
ID DQ362930 standard; genomic RNA; VRL; 2559 BP.
XX
AC DQ362930;
XX
SV DQ362930.1
XX
DT 08-FEB-2006 (Rel. 86, Created)
DT 08-FEB-2006 (Rel. 86, Last updated, Version 1)
XX
DE Grapevine fanleaf virus isolate NE185 38K (2B) and 56K (2C) genes, partial
DE cds.
XX
KW .
XX
OS Grapevine fanleaf virus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Comoviridae;
OC Nepovirus; Subgroup A.
XX
RN [1]
RP 1-2559
RA Terlizzi F., Biolchini L., Credi R.;
RT "Molecular characterization of Italian GFLV isolates";
RL Unpublished.
XX
RN [2]
RP 1-2559
RA Terlizzi F., Biolchini L., Credi R.;
RT ;
RL Submitted (12-JAN-2006) to the EMBL/GenBank/DDBJ databases.
RL Department of Agroenvironmental Sciences and Technology, University of
RL Bologna, Viale Fanin 40, Bologna, Bo 40127, Italy
XX
FH Key Location/Qualifiers
FH
FT source 1. .2559
FT /country="Italy:Piemonte"
FT /db_xref="taxon:12274"
FT /mol_type="genomic RNA"
FT /organism="Grapevine fanleaf virus"
FT /isolate="NE185"
FT /specific_host="V. rupestris St. George/Nebbiolo"
FT /segment="RNA2"
FT gene <1. .>1044
FT /gene="2B"
FT CDS <1. .>1044
FT /codon_start=1
FT /note="movement protein"
FT /gene="2B"
FT /product="38K"
FT /protein_id="ABC96680.1"
FT /translation="AEGRTTGGQTIAQEADPLQRRVSTSVAPGRAQWISERRQALRRRE
FT QANSLQGLAAQTDMTFEQARNAYLGAADMIEQGLPLLPPLRSAYAPRGLWRGPSTRANY
FT TLDFRLNGIPTGTNTLEILYNPVSEEEMEEYRDRGTSAVVIDALEIAINPFGMPGNPTD
FT LNVVATYGHERDMTRAFIGSASTFLGNGLARAIFFPGLQYGQEEPRRESIIRLYVASTN
FT ATVDTDSVLAAISVGTLRQHVGSMHYRTVANTVHQAQVQGTTLRATMMGNTVVVSPEGS
FT LVTGTPEARVEIGGGSSIRMVGPLQWESVEEPGQTFSIRSRSRSVRIDRNVDLPQLEAE
FT PRLSSTVR"
FT gene <1045. .2559
FT /gene="2C"
FT CDS <1045. .2559
FT /codon_start=1
FT /note="coat protein"
FT /gene="2C"
FT /product="56K"
FT /protein_id="ABC96681.1"
FT /translation="GLAGRGVIYIPKDCQANRYLGTLNIRDMISDFKGVQYEKWITAGL
FT VMPIFKVVIRLPANAFTGLTWVMSFDAYNRITSRITVSADPVYTLSVPHWLIHHKLGTF
FT SCEIDYGELCGHAMWFKSTTFESPRLHFTCLTGNNKELAADWQAVVELYAELEEATSFL
FT GKPTLVFDPGVFNGKFQFLTCPPIFFDLTAVTALRSAGLTLGQVPMVGTTKVYNLNSTL
FT VSCVLGMGGTIKGKVHICAPIFYSIVLWVVSEWNGTTMDWNELFKYPGVYVEEDGSFEV
FT KIRSSYHRTPARLLAGQSQRDMSSLNFYAIAGPIAPTGETARLPVVVQIDEIERPDLSL
FT PSFEDDYFVWVDFSEFTLDKEEIEIGSRFFDFTSSTCKVSIGENPFAAMIACHGLHSGV
FT LDLKLQWSLNTEFGKSSGSITVTKLVGDKALGLDGPSQVFAIQKLEGTTDLLIGNFAGA
FT NPNTHFSLYSRWMAIKMDQAKSIKVLRILCKPRPGFSFYGRTSFPV"
XX
SQ Sequence 2559 BP; 663 A; 535 C; 662 G; 699 T; 0 other;
dq362930 Length: 2559 08-FEB-2006 Type: N Check: 2838 ..
1 gcggaagggc gcactaccgg tgggcaaaca attgctcaag aagctgatcc
51 tttacaacgt agggtcagca cttcagtggc ccccggtagg gctcaatgga
101 tctctgagcg cagacaagct ctgcggagga gagagcaggc aaatagcctg
151 cagggtcttg ctgctcaaac tgatatgaca tttgagcagg ccaggaatgc
201 gtatcttggt gctgccgata tgattgagca aggcctacca ctgcttcctc
251 ctctgcgcag tgcatatgcc cctaggggct tgtggagggg accttctacc
301 agagccaatt acacgctaga tttcaggctc aatggtatac cgactgggac
351 aaacacgttg gaaatattat ataatcccgt gtcagaagaa gagatggaag
401 agtaccggga taggggcacg tcagccgtgg tgatcgatgc gctagaaata
451 gcgataaacc catttggcat gcccgggaat ccaacggact tgaatgtcgt
501 agcgacatat gggcatgaac gtgatatgac acgtgccttt attggatctg
551 cttccacgtt cctagggaat gggctagcta gagccatttt ctttcctggt
601 ttgcaatatg gccaggagga accaaggcgc gaatctataa ttcgcctata
651 tgtcgcctct actaatgcca ctgtggacac tgactcagtc ctggcagcca
701 tcagtgttgg tactttgcgc caacacgttg gctccatgca ttatcggaca
751 gtggctaata ccgtgcacca agcccaggtg caaggtacaa cgcttagggc
801 cactatgatg ggtaatactg ttgtagtgtc gcctgaagga agcctagtta
851 ctgggacccc cgaagccaga gttgaaatag gaggtggttc tagtatcagg
901 atggtaggac ctctacaatg ggaaagtgtg gaggaaccag ggcaaacctt
951 ctctatcaga agccgctcac gatctgtgag gattgataga aatgttgatc
1001 ttcctcagct tgaagctgag cctagactga gctcaaccgt gaggggatta
1051 gctggtagag gagtaattta tatcccaaag gattgccagg caaacaggta
1101 cttgggcacc ctgaatatac gagatatgat ctcggatttt aagggagtcc
1151 agtatgaaaa gtggataact gcaggattag tcatgcctat tttcaaggtt
1201 gttattaggc tacctgcaaa tgcctttact ggtttgacgt gggtgatgag
1251 ctttgatgct tataatcgga taactagcag aattactgtt agtgcggatc
1301 ctgtgtacac cctgtcagtc ccacattggc tcatccacca taagttgggc
1351 acgttttcat gtgagataga ttatggagaa ctatgtggtc atgccatgtg
1401 gtttaagtcc acaacatttg aatctccaag gttacatttt acatgcctaa
1451 ctggtaataa taaagagtta gcagcagact ggcaagctgt tgttgagctt
1501 tatgcagaat tggaagaagc cacatccttc cttggaaagc ccaccttggt
1551 ttttgacccg ggtgttttta atggcaaatt ccaattcttg acttgccctc
1601 ccatattctt tgatctaaca gccgtcacgg ctctcaggag tgctgggctg
1651 acgctgggcc aggtcccaat ggtcggcact accaaggttt ataacctaaa
1701 tagcaccctt gtgagttgtg ttctaggaat gggaggtact attaaaggaa
1751 aggttcacat ttgtgcgcca atcttttata gtattgtttt atgggttgtt
1801 agcgagtgga acgggaccac tatggactgg aatgagcttt tcaagtatcc
1851 cggggtgtat gtggaagaag atggaagttt tgaagttaaa attcgttctt
1901 catatcaccg aacgcctgct agattgcttg ctggtcaaag tcaaagggac
1951 atgagctctt tgaattttta tgcaatagca ggacctattg ctccaacggg
2001 tgagactgca cgacttcctg ttgtcgtgca gattgatgaa atcgagcgcc
2051 cagacctctc tttgccaagt tttgaagatg attattttgt gtgggtggat
2101 ttttctgaat tcactcttga caaagaagaa attgagattg gatctcgttt
2151 ctttgatttc acttcaagta cttgcaaagt gtctattgga gagaatccgt
2201 ttgctgcaat gattgcctgt cacgggttgc atagtggtgt attagacctc
2251 aaattacaat ggagtctgaa caccgaattt ggcaagagca gcgggagcat
2301 caccgttacg aagctggttg gtgataaagc tttgggcctg gatggacctt
2351 ctcaagtctt tgctattcaa aaactagagg gaactacaga tttgcttatt
2401 gggaattttg caggagcaaa cccaaacacg catttctccc tttatagtcg
2451 ttggatggca attaagatgg accaagcaaa gagtattaag gtactccgca
2501 ttttgtgtaa gccacgtcca ggtttcagtt tctatggaag aaccagcttc
2551 ccagtctag