Sequence of DPV Grapevine fanleaf virus
Grapevine fanleaf virus isolate DO64 38K (2B) and 56K (2C) genes, partial cds.
ACC No: DQ362931
Dated: 2006-02-08 | Length: 2559 | CRC: -1861408775
ID DQ362931 standard; genomic RNA; VRL; 2559 BP.
XX
AC DQ362931;
XX
SV DQ362931.1
XX
DT 08-FEB-2006 (Rel. 86, Created)
DT 08-FEB-2006 (Rel. 86, Last updated, Version 1)
XX
DE Grapevine fanleaf virus isolate DO64 38K (2B) and 56K (2C) genes, partial
DE cds.
XX
KW .
XX
OS Grapevine fanleaf virus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Comoviridae;
OC Nepovirus; Subgroup A.
XX
RN [1]
RP 1-2559
RA Terlizzi F., Biolchini L., Credi R.;
RT "Molecular characterization of Italian GFLV isolates";
RL Unpublished.
XX
RN [2]
RP 1-2559
RA Terlizzi F., Biolchini L., Credi R.;
RT ;
RL Submitted (12-JAN-2006) to the EMBL/GenBank/DDBJ databases.
RL Department of Agroenvironmental Sciences and Technology, University of
RL Bologna, Viale Fanin 40, Bologna, Bo 40127, Italy
XX
FH Key Location/Qualifiers
FH
FT source 1. .2559
FT /country="Italy:Piemonte"
FT /db_xref="taxon:12274"
FT /mol_type="genomic RNA"
FT /organism="Grapevine fanleaf virus"
FT /isolate="DO64"
FT /specific_host="V. rupestris St. George/Dolcetto"
FT /segment="RNA2"
FT gene <1. .>1044
FT /gene="2B"
FT CDS <1. .>1044
FT /codon_start=1
FT /note="movement protein"
FT /gene="2B"
FT /product="38K"
FT /protein_id="ABC96682.1"
FT /translation="ADGRTTGGQTIAQEADPLQHRVSTSVAPGRAQWISERRQALRRRE
FT QANSLQGLAAQTDMTFEQARNAYLGAADMIEQGLPLLPPLRSAYAPRGLWRGPSTRANY
FT TLDFRLNGIPTGTNTLEILYNPVSEEEMEEYRDRGMSAVVIDALEIAINPFGMPGNPTD
FT LTVVATYGHERDMSRAFIGSASTFLGNGLARAIFFPGLQYSQEEPRRESIIRLYVASTN
FT ATVDTDSVLAAISVGTLRQHVGSMHYRTVASTVHQAQVQGTTLRATMMGNTVVVSPEGN
FT LVTGTPEARVEIGGSSSIRMVGPLQWESVEEPGQTFSIRSRSRSVRVDRNVDLPQLEAE
FT PRLSSTVR"
FT gene <1045. .2559
FT /gene="2C"
FT CDS <1045. .2559
FT /codon_start=1
FT /note="coat protein"
FT /gene="2C"
FT /product="56K"
FT /protein_id="ABC96683.1"
FT /translation="GLAGRGVIYIPKDCQEKRYLGTLNIRDMISDFKGVQYEKWITAGL
FT VMPTFKIVVRLPANAFTGLTWVMSFDAYNRITSRITASADPVYTLSVPHWLIHHKLGTF
FT SCEIDYGELCGHAMWFKSTTFESPRLHFTCLTGNNKELAADWQAVVELYAELEEATSFL
FT GKPTLVFDPGVFNGRFHFLTCPPIYFDLTAITALKSAGLTLGQVPMVGTTRVYNLNSTL
FT VSCVLGMGGTIKGRVHICAPIFYSIVLWVVSEWNGTTMDWNELFKYPGVYVEEDGSFEV
FT KIRSPYHRTPARLLAGQSQRDMSSLNFYAIAGPIAPSGETARLPIVVQIDEIVRPDLSL
FT PSFEDDYFVWVDFSEFTLDKEEIEIGSRFFDFTSNTCRVSLGENPFAAMIACHGLHSGV
FT LDLKFQWSLNTEFGKSSGSITVTKLVGDKAMGLDGPSQVFALQKLEGATELLIGNFAGA
FT NPNSRFSLYSRWMAIKLDQAKSIKVLRVLCKPRPGFSFYGRTSFPV"
XX
SQ Sequence 2559 BP; 657 A; 535 C; 659 G; 708 T; 0 other;
dq362931 Length: 2559 08-FEB-2006 Type: N Check: 9081 ..
1 gcggatggaa gaactactgg ggggcaaacg attgctcaag aagctgaccc
51 tttacaacat agggtcagta cttcagttgc tcccggtagg gcacagtgga
101 tctctgagcg cagacaagct ctgcgaagga gagaacaagc aaatagcttg
151 caaggtcttg ccgctcagac tgatatgact tttgagcagg ccaggaatgc
201 ctatcttggt gctgctgaca tgattgagca aggcctacca ctgcttcccc
251 ctctgcgcag tgcttatgcc cctaggggtt tgtggagggg accttctacc
301 agagccaatt acacgctaga ctttaggctc aatggtattc cgactgggac
351 aaacacattg gaaatattat ataatcctgt gtcggaagaa gagatggaag
401 agtaccgtga caggggtatg tcagctgtgg tgattgatgc gctggaaata
451 gccatcaacc catttggcat gcctgggaat cctacggact tgactgttgt
501 agcaacatat ggacatgagc gtgatatgtc gcgtgccttt attggatctg
551 cttccacatt cctagggaat gggttagcta gagctatttt cttccctggc
601 ctgcaatata gccaggagga accaaggcgc gaatctataa ttcgcctata
651 tgttgcctct actaacgcca ctgtagacac tgattcagtt ttggcggcta
701 tcagtgttgg cactttacgt caacacgttg gctccatgca ttatcgtaca
751 gtggccagta ccgtgcacca ggcccaggtg caaggaacaa cactcagggc
801 tactatgatg ggtaatactg ttgtagtgtc acctgaagga aacctagtta
851 ctggaacccc tgaagccaga gttgaaattg ggggtagttc cagtatcagg
901 atggtgggac ctctacaatg ggaaagtgtg gaggaaccag ggcaaacctt
951 ctctatcaga agtcgttcac gatctgtgag ggttgataga aatgttgatc
1001 ttcctcaact tgaggctgag cccagattga gctcaaccgt gagaggatta
1051 gctggtagag gagtgattta tatcccaaag gattgccagg aaaaaaggta
1101 tttgggcacc ctgaatatac gtgatatgat ttctgacttt aagggtgttc
1151 agtacgaaaa gtggataact gcaggacttg ttatgcctac tttcaagata
1201 gttgttaggc tacctgcaaa tgcctttact gggttaacgt gggtgatgag
1251 ctttgatgct tataatcgga taactagtag aatcactgct agtgctgatc
1301 ctgtgtacac cctgtcggtt ccacactggc ttatccacca taagttgggc
1351 acgttttcat gtgagataga ttatggagaa ttgtgtggcc atgccatgtg
1401 gtttaagtcc acaacattcg aatctccaag gctacacttc acgtgtttaa
1451 cgggcaacaa caaagagttg gcggcagact ggcaagctgt cgtagagctg
1501 tatgctgaat tagaagaagc cacttctttt cttgggaaac caactctagt
1551 ttttgatcca ggtgttttta atggcagatt tcatttcctg acttgccctc
1601 ctatttattt tgacttgacg gccatcacgg ctctcaaaag tgctgggctg
1651 acactgggac aagttccaat ggttggcact actagggttt ataacttaaa
1701 cagcactctt gtgagttgtg tcttaggaat gggaggtact attaaaggta
1751 gggtacacat ctgtgcgcca atcttttata gtattgttct gtgggtcgtt
1801 agtgagtgga acgggaccac tatggactgg aatgaacttt tcaaatatcc
1851 cggggtgtat gtggaagaag acgggagctt tgaggtcaaa atacgctctc
1901 cgtatcaccg aacccctgct agattgcttg ctggccaaag tcagagagat
1951 atgagttctc tgaatttcta tgcaatagca ggaccaatag ctccatcggg
2001 tgagactgca cgacttccta tcgttgtaca gattgatgag atcgtgcgcc
2051 cagatctttc ccttccaagt tttgaagatg attattttgt gtgggtggac
2101 ttttctgagt tcacccttga taaagaagaa attgagattg gttcccgttt
2151 cttcgatttt acttcaaata cttgcagggt gtctctggga gaaaacccgt
2201 tcgctgcaat gattgcctgt cacggattgc atagtggcgt gttagacctc
2251 aaatttcaat ggagtctgaa cactgaattt ggcaagagca gtgggagcat
2301 tactgtcacg aagctggtgg gtgataaagc catgggcctg gacggtcctt
2351 ctcaagtttt tgccttacaa aaactagagg gagccacaga gttgttaatt
2401 gggaactttg caggagcaaa cccaaactct cgtttctccc tttacagtag
2451 atggatggca atcaaactgg atcaagcaaa gagtattaaa gtactccggg
2501 ttctgtgtaa gcctcgtcca ggtttcagct tctatggaag aaccagcttc
2551 ccagtctag