Sequence of DPV Grapevine fanleaf virus
Grapevine fanleaf virus isolate LGR12 38K (2B) and 56K (2C) genes, partial cds.
ACC No: DQ362934
Dated: 2006-02-08 | Length: 2559 | CRC: -1845987341
ID DQ362934 standard; genomic RNA; VRL; 2559 BP.
XX
AC DQ362934;
XX
SV DQ362934.1
XX
DT 08-FEB-2006 (Rel. 86, Created)
DT 08-FEB-2006 (Rel. 86, Last updated, Version 1)
XX
DE Grapevine fanleaf virus isolate LGR12 38K (2B) and 56K (2C) genes, partial
DE cds.
XX
KW .
XX
OS Grapevine fanleaf virus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Comoviridae;
OC Nepovirus; Subgroup A.
XX
RN [1]
RP 1-2559
RA Terlizzi F., Biolchini L., Credi R.;
RT "Molecular characterization of Italian GFLV isolates";
RL Unpublished.
XX
RN [2]
RP 1-2559
RA Terlizzi F., Biolchini L., Credi R.;
RT ;
RL Submitted (12-JAN-2006) to the EMBL/GenBank/DDBJ databases.
RL Department of Agroenvironmental Sciences and Technology, University of
RL Bologna, Viale Fanin 40, Bologna, Bo 40127, Italy
XX
FH Key Location/Qualifiers
FH
FT source 1. .2559
FT /country="Italy:Emilia Romagna"
FT /db_xref="taxon:12274"
FT /mol_type="genomic RNA"
FT /organism="Grapevine fanleaf virus"
FT /isolate="LGR12"
FT /specific_host="V. vinifera/Lambrusco Grasparossa"
FT /segment="RNA2"
FT gene <1. .>1044
FT /gene="2B"
FT CDS <1. .>1044
FT /codon_start=1
FT /note="movement protein"
FT /gene="2B"
FT /product="38K"
FT /protein_id="ABC96688.1"
FT /translation="ADGRTTGGQTIAQEADPLQHRVSTSVVPGRAQRISERRQALRRRE
FT QANSLQGLAAQTDMTFEQARNAYLGAADMIEQGLPLLPPLRSAYAPRGLWRGPSTRANY
FT TLDFRLNGIPTGTNTLEILYNPVSDEEMDDYRDRGMSAVVIDALEIAINPFGMPGNPTD
FT LTVVATYGHERNMECAFIGSSSTFLGNGLSRAIFFPGLQYSQEEPRRESIIRLYVASTN
FT ATVDTDSVLAAISVGTLRQHVGSMHYRTVASAVHQAQVQGTTLRATMMGNTVVVSPEGS
FT LVTGTPEARVEIGGGSSIRMVGPLQWESVEEPGQTFSIRSRSRSVRIDRNVDLPQLEAE
FT PRMSSTVR"
FT gene <1045. .2559
FT /gene="2C"
FT CDS <1045. .2559
FT /codon_start=1
FT /note="coat protein"
FT /gene="2C"
FT /product="56K"
FT /protein_id="ABC96689.1"
FT /translation="GLAGRGVIYIPKDCQANRYLGTLNIRDMISDFKGVQYEKWITAGL
FT VMPTFKIIVRLPANAFTGLTWVMSFDAYNRITSRITASADPVYTLSVPHWLIHHKLGTF
FT SCEVDYGELCGHAMWFKSTTFESPRLHFTCLTGNNKELAADWQAVVELYAELEEATSFL
FT GKPTLVFNPGIFNGKFQFLTCPPIFFDLTAVTALKSAGLTLGQVPMVGTTRVYNLNSTL
FT VSCVLGMGGTIKGRVHICAPVFYSIVLWVVSEWNGTTMDWNELFKYPGVYVEEDGTFEV
FT KIRSPYHRTPARLLANQSQRDMSSLNFYAIAGPIAPSGETARLPIVVQIDEIMRPDLSL
FT PSFEDDYFVWVDFSEFTLDKEEIEIGCRFFDFTSNTCRVSMGENPFAAMIACHGLHSGV
FT LDLKFQWSLNTEFGKSSGSVTITKLVGDKATGLDGPSHVFAIQKLEGTAELLVGNFAGA
FT NPNTHFSLYSRWMAIKLDQAKSIKVLRVLCKPRPGFSFYGRTSFPV"
XX
SQ Sequence 2559 BP; 648 A; 525 C; 667 G; 719 T; 0 other;
dq362934 Length: 2559 08-FEB-2006 Type: N Check: 7468 ..
1 gcggatggca ggactaccgg tgggcagacg attgctcaag aggctgatcc
51 gttgcaacac agggtcagca catccgtagt ccccggtagg gcgcaacgga
101 tctctgaacg cagacaggct ctgcggagga gagagcaggc aaacagcctg
151 cagggtcttg ctgctcaaac tgatatgact tttgagcaag ccaggaacgc
201 ttatcttggt gctgctgaca tgattgagca aggcctaccg ctgcttcccc
251 ctctacgcag cgcttatgcc cctaggggtt tgtggagggg accctcaacc
301 agagccaatt atacgttaga ttttaggctc aatggtattc cgactgggac
351 aaacacattg gaaatattgt ataatcccgt gtcggacgag gaaatggatg
401 actaccgtga caggggtatg tcagcagttg tgattgatgc acttgaaatt
451 gctataaatc cttttgggat gccgggcaat ccgactgatc ttactgtcgt
501 agccacatat gggcatgagc gtaacatgga atgtgccttt attggttctt
551 cttcgacctt tcttgggaat gggttgtcga gggccatttt cttcccaggt
601 ttgcaatata gccaggagga accaaggcgc gaatctataa ttcgcctata
651 tgttgcttct actaatgcta ctgtcgacac tgattcagtt ttggcagcca
701 ttagtgttgg cactttgcgt caacacgttg gctccatgca ttatcggaca
751 gtggctagtg ccgtgcacca agcccaggtg caaggcacga cactcagggc
801 aactatgatg ggtaatactg ttgtagtgtc acctgaggga agcctggtta
851 ctggaacccc ggaagcgaga gttgaaatag gaggtggttc tagtattagg
901 atggtaggac ctctacaatg ggaaagcgta gaggagccag ggcaaacctt
951 ctctatcagg agtcgttcac gatctgtgag gattgataga aatgttgatc
1001 ttcctcaact tgaggctgag cccagaatga gctcaaccgt gagaggatta
1051 gctggtagag gagtgatcta tattcccaag gattgccagg caaataggta
1101 cttgggcacc ctgaacatac gtgatatgat ctctgatttt aagggtgttc
1151 agtatgaaaa gtggataact gcggggctag tcatgcctac ttttaagata
1201 attgttaggc tgcccgcaaa tgcctttact ggactgacat gggtgatgag
1251 ttttgatgct tataatcgga taactagtag aattactgct agtgcagatc
1301 ctgtgtacac actgtcggtc ccacattggc ttatccatca taagttgggc
1351 acgttttcat gtgaagtgga ttacggagag ctgtgcggtc atgctatgtg
1401 gtttaagtcc acaacatttg agtctccaag actacatttc acgtgtttaa
1451 cgggcaacaa taaagagttg gcggcagact ggcaagctgt cgtagaacta
1501 tatgctgaat tggaagaggc cacctctttt cttgggaaac caactttggt
1551 ttttaaccca ggtattttta atggcaaatt ccaatttttg acttgccctc
1601 ccatattctt tgatctaaca gccgtcacag ctcttaagag tgctgggctg
1651 actttgggac aagtcccaat ggttggcact accagagtct ataacctaaa
1701 tagcactctt gtaagttgtg ttttgggtat gggaggtact atcaagggaa
1751 gggtgcacat ctgtgctcca gtcttttata gtattgtttt gtgggttgtt
1801 agtgagtgga acgggaccac tatggattgg aatgaacttt tcaagtaccc
1851 cggggtgtat gtggaagagg atggcacttt tgaagtcaaa attcgctctc
1901 catatcatcg aacacctgct agattgcttg ctaaccaaag ccagagagat
1951 atgagctctc tgaatttcta tgcaatagcg ggacctatcg ctccatcggg
2001 tgaaactgcg cgacttccta tagttgtgca gattgatgag attatgcgcc
2051 cagacctctc tttaccaagt tttgaagatg actattttgt atgggtggat
2101 ttttctgagt tcactctcga caaagaagag attgagattg gttgtcgttt
2151 cttcgatttc acttcaaata cttgtagagt atctatggga gaaaatccgt
2201 ttgctgcaat gattgcctgt catggattgc acagtggtgt attagacctc
2251 aaatttcaat ggagtctgaa cactgaattt ggcaagagca gcgggagcgt
2301 tactatcacg aagctggtag gtgacaaagc tacaggtttg gacggacctt
2351 cacacgtttt tgctattcaa aaactggagg gaactgcaga actgttggtt
2401 gggaattttg cgggagcaaa cccaaacact catttctctc tctacagtcg
2451 gtggatggca attaaattgg accaagcaaa gagtattaaa gtactccgcg
2501 ttttgtgtaa gccacgtcca ggctttagtt tttatgggag aaccagcttt
2551 ccagtctag