Sequence of DPV Cowpea aphid-borne mosaic virus

Cowpea aphid-borne mosaic virus isolate SP-Vcz coat protein (CP) mRNA, partial cds.

ACC No: DQ397530

Dated: 2006-08-15 | Length: 1057 | CRC: -477531234

                
ID   DQ397530; SV 1; linear; mRNA; STD; VRL; 1057 BP.
XX
AC   DQ397530;
XX
DT   08-MAR-2006 (Rel. 87, Created)
DT   15-AUG-2006 (Rel. 88, Last updated, Version 2)
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DE   Cowpea aphid-borne mosaic virus isolate SP-Vcz coat protein (CP) mRNA,
DE   partial cds.
XX
KW   .
XX
OS   Cowpea aphid-borne mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-1057
RX   PUBMED; 16596328.
RA   Nascimento A.V., Santana E.N., Braz A.S., Alfenas P.F., Pio-Ribeiro G.,
RA   Andrade G.P., de Carvalho M.G., Zerbini F.M.;
RT   "Cowpea aphid-borne mosaic virus (CABMV) is widespread in passionfruit in
RT   Brazil and causes passionfruit woodiness disease";
RL   Arch. Virol. 151(9):1797-1809(2006).
XX
RN   [2]
RP   1-1057
RA   Nascimento A.V.S., Santana E.N., Zerbini F.M.;
RT   ;
RL   Submitted (09-FEB-2006) to the EMBL/GenBank/DDBJ databases.
RL   Fitopatologia, Universidade Federal de Vicosa, Av. P.H. Rolfs, s/n, Vicosa,
RL   MG 36570-000, Brazil
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FH   Key             Location/Qualifiers
FH
FT   source          1. .1057
FT                   /organism="Cowpea aphid-borne mosaic virus"
FT                   /isolate="SP-Vcz"
FT                   /mol_type="mRNA"
FT                   /country="Brazil"
FT                   /db_xref="taxon:12199"
FT   gene            <1. .1057
FT                   /gene="CP"
FT   CDS             <1. .828
FT                   /codon_start=1
FT                   /gene="CP"
FT                   /product="coat protein"
FT                   /db_xref="GOA:Q27IZ8"
FT                   /db_xref="UniProtKB/TrEMBL:Q27IZ8"
FT                   /protein_id="ABD62098.1"
FT                   /translation="SDGKDKELNAGKDKDKKKEAKEQSVQQKQAKNKGAKETERDVATS
FT                   SSGQLVPRLQKISKKMNMPMIAGRVILNLDHLIEYKPAQIDLYNTRASKTQLNKWFEAI
FT                   KEEYDLDDDKMGVVMNGFMVWCIENGTSPDVNGVWTMMDGDEQVEFPLKPIVENAKPTL
FT                   RQILHHFSNAAEAFFEMRNSEGFYMPRFGLGGILKAKSLARYAFDFYEVTSKTSERARE
FT                   AIAQMKAAALANVNTRMFGLDGNVATTSENTERHTATDVNQNMHSLLGMTHGQ"
XX
SQ   Sequence 1057 BP; 338 A; 195 C; 265 G; 259 T; 0 other;

dq397530 Length: 1057  15-AUG-2006  Type: N  Check: 484  ..

       1  tctgatggaa aggacaaaga attgaatgca ggcaaggaca aagataagaa
      51  gaaagaagct aaagagcaat ccgtgcaaca gaagcaagca aagaacaaag
     101  gggcgaagga aacagaaagg gatgttgcaa ctagttcttc agggcaattg
     151  gttccacgtt tacaaaagat cagcaagaag atgaatatgc ctatgattgc
     201  tggcagagtc attctcaatt tggaccactt gatagagtac aagccagcac
     251  aaattgacct atacaacacc agagcatcaa agacacagct caacaaatgg
     301  tttgaggcca ttaaagagga atacgatctg gatgatgaca agatgggtgt
     351  tgtaatgaat ggattcatgg tttggtgcat tgaaaatggg acttcacctg
     401  atgttaatgg agtgtggact atgatggatg gggatgaaca agtggaattt
     451  ccacttaaac ccattgtgga aaatgcaaaa cccacactta gacaaatttt
     501  gcaccacttc tcaaacgcag ctgaagcgtt ttttgagatg agaaattctg
     551  aagggttcta catgcccagg tttggactcg gaggaatttt aaaagccaag
     601  agcttggcaa ggtatgcttt cgatttctat gaagtcacat ctaagacttc
     651  tgagagagca agggaagcaa tagcacaaat gaaggctgca gctctcgcta
     701  acgtcaacac caggatgttt ggcctggatg ggaacgtggc aacaactagt
     751  gagaacactg agaggcacac tgctactgat gtgaatcaga acatgcattc
     801  cctcttaggg atgacgcatg ggcagtaaag gcttgggttc cgccctcgcc
     851  acagttatcg tctcacgatc ttagctaatg gttggtttta gtaaatagta
     901  cgcatatatc cagttgaact atatatgtca gtgtggtttt ccaccagtat
     951  gttatgttac tttaattgaa cttagcggag aggccataac cccggttgga
    1001  gtgctcagag tgagtgtatc atgcgtagct accgtgactt gtgtatgaaa
    1051  actctcg