Sequence of DPV Plum pox virus

Plum pox virus isolate 9.2 C6/Pm coat protein (CP) mRNA, partial cds.

ACC No: DQ423239

Dated: 2006-04-01 | Length: 993 | CRC: 167761271

                
ID   DQ423239   standard; mRNA; VRL; 993 BP.
XX
AC   DQ423239;
XX
SV   DQ423239.1
XX
DT   01-APR-2006 (Rel. 87, Created)
DT   01-APR-2006 (Rel. 87, Last updated, Version 1)
XX
DE   Plum pox virus isolate 9.2 C6/Pm coat protein (CP) mRNA, partial cds.
XX
KW   .
XX
OS   Plum pox virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-993
RA   Capote N., Carbonell E.A., Urbaneja A., Cambra M.;
RT   "Risk assessment of the release of transgenic European plums (Prunus
RT   domestica L.) to the open field in Mediterranean conditions";
RL   Unpublished.
XX
RN   [2]
RP   1-993
RA   Capote N., Cambra M.;
RT   ;
RL   Submitted (02-MAR-2006) to the EMBL/GenBank/DDBJ databases.
RL   Plant Protection and Biotechnology, Instituto Valenciano de Investigaciones
RL   Agrarias (IVIA), Carretera Moncada-Naquera km 4,5, Moncada, Valencia 46113,
RL   Spain
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .993
FT                   /organism="Plum pox virus"
FT                   /specific_host="European plum (Prunus domestica L.)"
FT                   /isolate="9.2 C6/Pm"
FT                   /serotype="D"
FT                   /mol_type="mRNA"
FT                   /country="Spain"
FT                   /db_xref="taxon:12211"
FT   gene            <1. .993
FT                   /gene="CP"
FT   CDS             <1. .993
FT                   /codon_start=1
FT                   /gene="CP"
FT                   /product="coat protein"
FT                   /note="structural protein"
FT                   /protein_id="ABD94366.1"
FT                   /translation="ADEREDEEEVDAGKPIVVTAPAATSPILQPPPVIQPAPRTTAPMP
FT                   NPIFTPATTQPATKPVSQVSGPQLQTFGTYGNEDASPSNSNALVNTNRDRDVDAGSIGT
FT                   FTVPRLKAMTSKLSLPKVKGKAIMNLNHLAHYSPAQVDLSNTRAPQSCFQTWYEGVKRD
FT                   YDVTDDEMSIILNGLMVWCIENGTSPNINGMWVMMDGETQVEYPIKPLLDHAKPTFRQI
FT                   MAHFSNVAEAYIEKRNYEKAYMPRYGIQRNLTDYSLARYAFDFYEMTSTTPVRAREAHI
FT                   QMKAAALRNVQNRLFGLDGNVGTQEEDTERHTAGDVNRNMHNLLGVRGV"
XX
SQ   Sequence 993 BP; 317 A; 222 C; 237 G; 217 T; 0 other;

dq423239 Length: 993  01-APR-2006  Type: N  Check: 8398  ..

       1  gctgacgaaa gagaagacga ggaggaagtt gatgcaggca agccgattgt
      51  agtcactgca ccggcagcaa ctagcccaat acttcaacca cctccagtca
     101  tacagcctgc accccggact acggcgccaa tgcccaaccc cattttcacg
     151  ccagcaacaa ctcaaccagc aacaaaacca gtttcacagg tgtcaggacc
     201  tcaactgcaa acttttggaa catatggtaa tgaggatgca tcacctagca
     251  actcaaacgc gctagtcaac acaaacagag acagggacgt cgatgcagga
     301  tcaattggaa cttttacagt gccacgtttg aaggcaatga cttcgaaact
     351  atctctgcca aaggtgaagg gaaaggctat tatgaacttg aaccatttgg
     401  cacattatag tcctgcacag gttgacttgt ccaacacgag agctccgcag
     451  tcttgtttcc aaacttggta tgaaggagtt aagcgagatt atgatgtcac
     501  ggacgatgaa atgagcatca ttttaaatgg tcttatggtt tggtgcatag
     551  agaatggaac atccccgaat atcaatggaa tgtgggtgat gatggacggg
     601  gaaacacaag tggagtatcc aataaagcca ttgttggatc atgcgaagcc
     651  cacttttaga caaattatgg cacatttcag taacgtggct gaagcgtata
     701  ttgaaaaacg aaattatgaa aaagcataca tgccaaggta tggaattcag
     751  cgcaacctga cagactacag cctcgccaga tatgcctttg atttttacga
     801  aatgacttca acgacacccg tacgggcacg tgaagctcat atccagatga
     851  aggcagcagc attgagaaat gttcaaaatc gtttatttgg cttggatgga
     901  aacgtcggaa cacaagaaga ggacacagag agacacaccg ctggtgatgt
     951  taatcgcaac atgcacaacc tcctcggtgt gaggggagtg tag