Sequence of DPV Pelargonium flower break virus
Pelargonium flower break virus isolate SP2 clone 1 putative movement protein (p7), putative movement protein (p12), and coat protein (CP) genes, complete cds.
ACC No: DQ443005
Dated: 2006-08-01 | Length: 1828 | CRC: -1013917803
ID DQ443005; SV 1; linear; genomic RNA; STD; VRL; 1828 BP. XX AC DQ443005; XX DT 06-APR-2006 (Rel. 87, Created) DT 01-AUG-2006 (Rel. 88, Last updated, Version 2) XX DE Pelargonium flower break virus isolate SP2 clone 1 putative movement DE protein (p7), putative movement protein (p12), and coat protein (CP) genes, DE complete cds. XX KW . XX OS Pelargonium flower break virus OC Viruses; ssRNA positive-strand viruses, no DNA stage; Tombusviridae; OC Carmovirus. XX RN [1] RP 1-1828 RX PUBMED; 16873268. RA Rico P., Ivars P., Elena S.F., Hernandez C.; RT "Insights into the selective pressures restricting pelargonium flower break RT virus genome variability: evidence for host adaptation"; RL J. Virol. 80(16):8124-8132(2006). XX RN [2] RP 1-1828 RA Rico P., Ivars P., Elena S.F., Hernandez C.; RT ; RL Submitted (06-MAR-2006) to the EMBL/GenBank/DDBJ databases. RL Biologia del estres, Instituto de Biologia Molecular y Celular de Plantas, RL Avda. de los Naranjos s/n, Valencia, Valencia 46022, Spain XX FH Key Location/Qualifiers FH FT source 1. .1828 FT /organism="Pelargonium flower break virus" FT /specific_host="Pelargonium" FT /isolate="SP2" FT /mol_type="genomic RNA" FT /country="Spain" FT /clone="1" FT /db_xref="taxon:35291" FT gene 193. .399 FT /gene="p7" FT CDS 193. .399 FT /codon_start=1 FT /gene="p7" FT /product="putative movement protein" FT /db_xref="GOA:Q70WT9" FT /db_xref="InterPro:IPR007982" FT /db_xref="UniProtKB/TrEMBL:Q70WT9" FT /protein_id="ABD93217.1" FT /translation="MASKVIVPDLGSDNEIDVSVGGRGNRGKQKGKISVAKDAVSKRTS FT DGGNGGSWVVVAETVSVNIHFNF" FT gene 233. .550 FT /gene="p12" FT CDS 233. .550 FT /codon_start=1 FT /gene="p12" FT /product="putative movement protein" FT /db_xref="UniProtKB/TrEMBL:Q1PGM3" FT /protein_id="ABD93218.1" FT /translation="MRLTCQWEDVGTGENRRVRYPSQRTLSPNGHLMVVMGVLGLLWLR FT PFRSIYTSTFSMPPLINLQHILNLTLLTLILSSFILAERVTHNQYSNDNSKAQYIRIST FT G" FT gene 555. .1592 FT /gene="CP" FT CDS 555. .1592 FT /codon_start=1 FT /gene="CP" FT /product="coat protein" FT /db_xref="GOA:Q1PGM5" FT /db_xref="UniProtKB/TrEMBL:Q1PGM5" FT /protein_id="ABD93219.1" FT /translation="MDAYKNDPIVRQAVAKGVAWAVKLNTRGWSSLTTQQKKAARSALS FT VIQSPAVVVPRRTRVRNPVPAGLKSGNGKAGKSSTLTRSEFICNVSSTTGVTPTFQSWI FT INPREVKSFPQSSVCSVGYNKYRITDFRIRFSTSCSDTMNGKVAIGFTPDSSDPVPVDK FT SQLYGMQVYADTPAKESVTLKTAADNTIRFLRDSSSDDAKLVDYGRVVLATYGFDSTAP FT SVIGELFFEYTVVYLDPTYVVALTQHGTLTTSSGPPYATLTTTATSTSMELNTHGKWLV FT VWVSADEVINSPVISGSGASGSVSVVSDAQTTVVAVVTANLPGAIISNSSTAAPSSLEW FT YVSRL" XX SQ Sequence 1828 BP; 464 A; 448 C; 487 G; 429 T; 0 other; dq443005 Length: 1828 01-AUG-2006 Type: N Check: 8223 .. 1 atcaggaacg tacaggttag cccagaattc ttctcgggcc tatggttcag 51 ttagcgagat ggcgcgtttt agtttcttcc tggcattcgg agttatccca 101 gatgctcaga ttgccttgga gaaacacata agagacatgc ccgtcgcagc 151 tgaatttggg cccgatgaaa gtctggcaga ccacacaatt gaatggcttc 201 taaagtgatc gttcctgatt tgggtagtga caatgagatt gacgtgtcag 251 tgggaggacg tgggaacagg ggaaaacaga agggtaagat atccgtcgca 301 aaggacgctg tctccaaacg gacatctgat ggtggtaatg ggggttcttg 351 ggttgttgtg gctgagaccg tttcggtcaa tatacacttc aacttttagc 401 atgccccctc tgataaacct ccaacacata ctgaatctta ccttgttgac 451 cctgattctg agttctttca tcttggcaga gagagtaacg cacaatcagt 501 actcaaacga caacagcaaa gcgcaatata tacggatctc aactgggtaa 551 taacatggac gcctacaaga atgacccaat agttaggcag gcagtggcaa 601 agggagtagc ttgggcggtt aagctgaaca ctagagggtg gtcttcattg 651 accacccaac agaagaaagc agcgcgctca gctctgtctg tgatacaatc 701 cccagcggtg gttgtacctc gcagaaccag agtacgaaac ccagtacccg 751 cgggcctgaa atcagggaat ggcaaggcag ggaaaagctc aactctaacc 801 cgatcggagt ttatctgcaa cgtatcgagc acaaccgggg tgaccccgac 851 tttccaatca tggataataa atcctaggga ggtcaaaagt ttcccacaat 901 cttccgtctg ctcggttggc tacaacaagt acaggattac ggacttcagg 951 attaggtttt ctacttcctg ttccgacact atgaatggga aggtggccat 1001 tggcttcact cccgactcta gcgatccggt ccctgttgat aagtcacagc 1051 tgtacgggat gcaggtgtat gccgacactc cagcaaagga gtcggtcacc 1101 ttgaagacgg ctgcagataa cacgatcagg ttcctgcggg attcatccag 1151 cgatgatgcc aagctggtgg attatggccg cgtagtttta gccacatacg 1201 gattcgatag cacagctccg tcagtgatag gagagctgtt cttcgagtac 1251 accgtagttt acctcgaccc tacctatgtc gtggctttaa cacaacatgg 1301 cacgttgacc acctcatctg gccccccata tgctaccttg accaccactg 1351 ccacttcaac atccatggaa ttaaacaccc atggaaagtg gctagtggtt 1401 tgggtctcgg cagacgaggt gatcaactct ccggttatat ccgggtccgg 1451 ggcaagcgga tccgtatctg tcgttagcga cgcacagacc actgttgttg 1501 cagtggttac cgcaaacttg ccaggcgcca tcatttctaa ctcttcaacc 1551 gctgcccctt cgtcactgga gtggtacgta tctaggctat gagagggcag 1601 tcaccctacc ttctgccaga ggttcccgga ggagtagtga tcctttgggg 1651 gtgattcata gctaagaaag gttggagagt tgggaggagg ccaactgggg 1701 gaggtgctag gagcaccaga ggcagcagag caaaaatccg ggtttcatcg 1751 cctggtgcgg gcgctcaatg ctgctaacaa gttcctgaag gaagaaaggt 1801 tttggtcgat ggagacctta acccgccc