Sequence of DPV Pelargonium flower break virus
Pelargonium flower break virus isolate SP2 clone 1 putative movement protein (p7), putative movement protein (p12), and coat protein (CP) genes, complete cds.
ACC No: DQ443005
Dated: 2006-08-01 | Length: 1828 | CRC: -1013917803
ID DQ443005; SV 1; linear; genomic RNA; STD; VRL; 1828 BP.
XX
AC DQ443005;
XX
DT 06-APR-2006 (Rel. 87, Created)
DT 01-AUG-2006 (Rel. 88, Last updated, Version 2)
XX
DE Pelargonium flower break virus isolate SP2 clone 1 putative movement
DE protein (p7), putative movement protein (p12), and coat protein (CP) genes,
DE complete cds.
XX
KW .
XX
OS Pelargonium flower break virus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Tombusviridae;
OC Carmovirus.
XX
RN [1]
RP 1-1828
RX PUBMED; 16873268.
RA Rico P., Ivars P., Elena S.F., Hernandez C.;
RT "Insights into the selective pressures restricting pelargonium flower break
RT virus genome variability: evidence for host adaptation";
RL J. Virol. 80(16):8124-8132(2006).
XX
RN [2]
RP 1-1828
RA Rico P., Ivars P., Elena S.F., Hernandez C.;
RT ;
RL Submitted (06-MAR-2006) to the EMBL/GenBank/DDBJ databases.
RL Biologia del estres, Instituto de Biologia Molecular y Celular de Plantas,
RL Avda. de los Naranjos s/n, Valencia, Valencia 46022, Spain
XX
FH Key Location/Qualifiers
FH
FT source 1. .1828
FT /organism="Pelargonium flower break virus"
FT /specific_host="Pelargonium"
FT /isolate="SP2"
FT /mol_type="genomic RNA"
FT /country="Spain"
FT /clone="1"
FT /db_xref="taxon:35291"
FT gene 193. .399
FT /gene="p7"
FT CDS 193. .399
FT /codon_start=1
FT /gene="p7"
FT /product="putative movement protein"
FT /db_xref="GOA:Q70WT9"
FT /db_xref="InterPro:IPR007982"
FT /db_xref="UniProtKB/TrEMBL:Q70WT9"
FT /protein_id="ABD93217.1"
FT /translation="MASKVIVPDLGSDNEIDVSVGGRGNRGKQKGKISVAKDAVSKRTS
FT DGGNGGSWVVVAETVSVNIHFNF"
FT gene 233. .550
FT /gene="p12"
FT CDS 233. .550
FT /codon_start=1
FT /gene="p12"
FT /product="putative movement protein"
FT /db_xref="UniProtKB/TrEMBL:Q1PGM3"
FT /protein_id="ABD93218.1"
FT /translation="MRLTCQWEDVGTGENRRVRYPSQRTLSPNGHLMVVMGVLGLLWLR
FT PFRSIYTSTFSMPPLINLQHILNLTLLTLILSSFILAERVTHNQYSNDNSKAQYIRIST
FT G"
FT gene 555. .1592
FT /gene="CP"
FT CDS 555. .1592
FT /codon_start=1
FT /gene="CP"
FT /product="coat protein"
FT /db_xref="GOA:Q1PGM5"
FT /db_xref="UniProtKB/TrEMBL:Q1PGM5"
FT /protein_id="ABD93219.1"
FT /translation="MDAYKNDPIVRQAVAKGVAWAVKLNTRGWSSLTTQQKKAARSALS
FT VIQSPAVVVPRRTRVRNPVPAGLKSGNGKAGKSSTLTRSEFICNVSSTTGVTPTFQSWI
FT INPREVKSFPQSSVCSVGYNKYRITDFRIRFSTSCSDTMNGKVAIGFTPDSSDPVPVDK
FT SQLYGMQVYADTPAKESVTLKTAADNTIRFLRDSSSDDAKLVDYGRVVLATYGFDSTAP
FT SVIGELFFEYTVVYLDPTYVVALTQHGTLTTSSGPPYATLTTTATSTSMELNTHGKWLV
FT VWVSADEVINSPVISGSGASGSVSVVSDAQTTVVAVVTANLPGAIISNSSTAAPSSLEW
FT YVSRL"
XX
SQ Sequence 1828 BP; 464 A; 448 C; 487 G; 429 T; 0 other;
dq443005 Length: 1828 01-AUG-2006 Type: N Check: 8223 ..
1 atcaggaacg tacaggttag cccagaattc ttctcgggcc tatggttcag
51 ttagcgagat ggcgcgtttt agtttcttcc tggcattcgg agttatccca
101 gatgctcaga ttgccttgga gaaacacata agagacatgc ccgtcgcagc
151 tgaatttggg cccgatgaaa gtctggcaga ccacacaatt gaatggcttc
201 taaagtgatc gttcctgatt tgggtagtga caatgagatt gacgtgtcag
251 tgggaggacg tgggaacagg ggaaaacaga agggtaagat atccgtcgca
301 aaggacgctg tctccaaacg gacatctgat ggtggtaatg ggggttcttg
351 ggttgttgtg gctgagaccg tttcggtcaa tatacacttc aacttttagc
401 atgccccctc tgataaacct ccaacacata ctgaatctta ccttgttgac
451 cctgattctg agttctttca tcttggcaga gagagtaacg cacaatcagt
501 actcaaacga caacagcaaa gcgcaatata tacggatctc aactgggtaa
551 taacatggac gcctacaaga atgacccaat agttaggcag gcagtggcaa
601 agggagtagc ttgggcggtt aagctgaaca ctagagggtg gtcttcattg
651 accacccaac agaagaaagc agcgcgctca gctctgtctg tgatacaatc
701 cccagcggtg gttgtacctc gcagaaccag agtacgaaac ccagtacccg
751 cgggcctgaa atcagggaat ggcaaggcag ggaaaagctc aactctaacc
801 cgatcggagt ttatctgcaa cgtatcgagc acaaccgggg tgaccccgac
851 tttccaatca tggataataa atcctaggga ggtcaaaagt ttcccacaat
901 cttccgtctg ctcggttggc tacaacaagt acaggattac ggacttcagg
951 attaggtttt ctacttcctg ttccgacact atgaatggga aggtggccat
1001 tggcttcact cccgactcta gcgatccggt ccctgttgat aagtcacagc
1051 tgtacgggat gcaggtgtat gccgacactc cagcaaagga gtcggtcacc
1101 ttgaagacgg ctgcagataa cacgatcagg ttcctgcggg attcatccag
1151 cgatgatgcc aagctggtgg attatggccg cgtagtttta gccacatacg
1201 gattcgatag cacagctccg tcagtgatag gagagctgtt cttcgagtac
1251 accgtagttt acctcgaccc tacctatgtc gtggctttaa cacaacatgg
1301 cacgttgacc acctcatctg gccccccata tgctaccttg accaccactg
1351 ccacttcaac atccatggaa ttaaacaccc atggaaagtg gctagtggtt
1401 tgggtctcgg cagacgaggt gatcaactct ccggttatat ccgggtccgg
1451 ggcaagcgga tccgtatctg tcgttagcga cgcacagacc actgttgttg
1501 cagtggttac cgcaaacttg ccaggcgcca tcatttctaa ctcttcaacc
1551 gctgcccctt cgtcactgga gtggtacgta tctaggctat gagagggcag
1601 tcaccctacc ttctgccaga ggttcccgga ggagtagtga tcctttgggg
1651 gtgattcata gctaagaaag gttggagagt tgggaggagg ccaactgggg
1701 gaggtgctag gagcaccaga ggcagcagag caaaaatccg ggtttcatcg
1751 cctggtgcgg gcgctcaatg ctgctaacaa gttcctgaag gaagaaaggt
1801 tttggtcgat ggagacctta acccgccc