Sequence of DPV Pelargonium flower break virus
Pelargonium flower break virus isolate SP10 clone 2 putative movement protein (p7), putative movement protein (p12), and coat protein (CP) genes, complete cds.
ACC No: DQ443011
Dated: 2006-08-01 | Length: 1829 | CRC: -109953083
ID DQ443011; SV 1; linear; genomic RNA; STD; VRL; 1829 BP.
XX
AC DQ443011;
XX
DT 06-APR-2006 (Rel. 87, Created)
DT 01-AUG-2006 (Rel. 88, Last updated, Version 2)
XX
DE Pelargonium flower break virus isolate SP10 clone 2 putative movement
DE protein (p7), putative movement protein (p12), and coat protein (CP) genes,
DE complete cds.
XX
KW .
XX
OS Pelargonium flower break virus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Tombusviridae;
OC Carmovirus.
XX
RN [1]
RP 1-1829
RX PUBMED; 16873268.
RA Rico P., Ivars P., Elena S.F., Hernandez C.;
RT "Insights into the selective pressures restricting pelargonium flower break
RT virus genome variability: evidence for host adaptation";
RL J. Virol. 80(16):8124-8132(2006).
XX
RN [2]
RP 1-1829
RA Rico P., Ivars P., Elena S.F., Hernandez C.;
RT ;
RL Submitted (06-MAR-2006) to the EMBL/GenBank/DDBJ databases.
RL Biologia del estres, Instituto de Biologia Molecular y Celular de Plantas,
RL Avda. de los Naranjos s/n, Valencia, Valencia 46022, Spain
XX
FH Key Location/Qualifiers
FH
FT source 1. .1829
FT /organism="Pelargonium flower break virus"
FT /specific_host="Pelargonium"
FT /isolate="SP10"
FT /mol_type="genomic RNA"
FT /country="Spain"
FT /clone="2"
FT /db_xref="taxon:35291"
FT gene 193. .399
FT /gene="p7"
FT CDS 193. .399
FT /codon_start=1
FT /gene="p7"
FT /product="putative movement protein"
FT /db_xref="GOA:Q70WT9"
FT /db_xref="InterPro:IPR007982"
FT /db_xref="UniProtKB/TrEMBL:Q70WT9"
FT /protein_id="ABD93235.1"
FT /translation="MASKVIVPDLGSDNEIDVSVGGRGNRGKQKGKISVAKDAVSKRTS
FT DGGNGGSWVVVAETVSVNIHFNF"
FT gene 233. .553
FT /gene="p12"
FT CDS 233. .553
FT /codon_start=1
FT /gene="p12"
FT /product="putative movement protein"
FT /db_xref="UniProtKB/TrEMBL:Q70WT8"
FT /protein_id="ABD93236.1"
FT /translation="MRLTCQWEDVGTGVNRRVRYPSQRTLSPNGHLMVVMGVLGLLWLR
FT PFRSIYTSTFSMPPLINLQHILNLTLLSLILSSFILAERVTHNHYSNDNSKAQYIRIST
FT GQ"
FT gene 555. .1592
FT /gene="CP"
FT CDS 555. .1592
FT /codon_start=1
FT /gene="CP"
FT /product="coat protein"
FT /db_xref="GOA:Q1PGF0"
FT /db_xref="UniProtKB/TrEMBL:Q1PGF0"
FT /protein_id="ABD93237.1"
FT /translation="MDAYKNDPIVRQAVAKGVAWAVKLNTRGWSSLTTQQKKAARSALS
FT VIQSPAVVVPRRTRVRNPVPAGLKSGNGKAGKSSTLTRSEFICNVSSTTGVTPTFQSWI
FT INPREVKSFPQSSVCSVGYNKYRITDFRIRFSTSCSDTMNGKVAIGFTPDSSDPVPVDK
FT SQLYGMQVYADTPAKESVTLKTAADNTIRFLRDSSSDDAKLVDYGRVVLATYGFDSTAP
FT SVIGELFFEYTVVYLDPTYVVALTQHGTLTTSSGPPYATLTTTATSTSMELNTHGKWLV
FT VWVSADEVINSPVISGSGASGSVTVVSDAQTTVVAVVTANLPGAIISNTSTAAPSSLEW
FT YVSRL"
FT 3'UTR 1593. .1829
XX
SQ Sequence 1829 BP; 463 A; 446 C; 484 G; 436 T; 0 other;
dq443011 Length: 1829 01-AUG-2006 Type: N Check: 1514 ..
1 atcaggaacg tacaggttag cccagaattc ttctcgggcc tatggttcag
51 ttagcgagat ggcgcgtttt agtttcttcc tggcgtttgg agttatccca
101 gatgcccaga ttgccttaga gaaacacata agagacatgc ccgtcgcagc
151 tgaatttggg cccgatgaaa gtctggcaga ccacacaatt gaatggcttc
201 taaagtgatc gttcctgatt tgggtagtga taatgagatt gacgtgtcag
251 tgggaggacg tgggaacagg ggtaaacaga agggtaagat atccgtcgca
301 aaggacgctg tctccaaacg gacatctgat ggtggtaatg ggggttcttg
351 ggttgttgtg gctgagaccg tttcggtcaa tatacacttc aacttttagc
401 atgccccctc tgataaacct ccaacacata ttgaatctta ctttgttgtc
451 cctgattcta agttctttca tcttggcaga gagagtaacg cacaatcact
501 actcaaacga caacagcaaa gcgcaataca tacggatctc aactgggcaa
551 taacatggac gcctacaaga atgacccaat agttaggcag gcagtggcaa
601 agggagtagc ttgggcggtt aagctgaaca ctagagggtg gtcttcattg
651 acaacccaac agaagaaggc tgcgcgctca gctctgtctg tgatacaatc
701 cccagcggtg gttgtacctc gcagaaccag agtacgaaac ccagtacccg
751 cgggcctgaa atcagggaat ggcaaggcag ggaaaagctc aactctaacc
801 cgatcggagt ttatctgcaa cgtatcgagc acaaccgggg tgaccccgac
851 tttccaatca tggattataa atcctaggga ggtcaaaagt ttcccacaat
901 cttccgtctg ctcggttggc tacaacaagt acaggatcac ggacttcagg
951 attaggtttt ctacttcctg ttccgacact atgaatggga aggtggccat
1001 tggcttcact cctgactcta gcgatccggt tcctgttgat aagtcacagc
1051 tgtacgggat gcaggtgtat gccgacactc cagcaaagga gtcggtcacc
1101 ttgaagacgg ctgcagataa tacgattagg ttcctgcggg attcatccag
1151 cgatgatgcc aagctggtgg attatggccg cgtagtttta gccacatacg
1201 gtttcgatag cacagctcca tcagtaatag gagagctgtt cttcgagtac
1251 accgtagttt atctcgaccc tacctatgtc gtggctttaa cacaacatgg
1301 cacgttgacc acctcatctg gccccccata tgctaccttg accaccactg
1351 ccacttcaac atccatggaa ttaaacaccc atggaaagtg gctagtggtt
1401 tgggtctcgg cagacgaggt gatcaactct ccggttatat ccgggtccgg
1451 ggcaagcgga tccgtaactg tcgttagcga cgcacagact actgttgttg
1501 cagtggttac cgcaaacttg ccaggcgcca tcatttccaa cacttcaacc
1551 gctgcccctt cgtcactgga gtggtacgta tctaggctat gagagggcag
1601 tcaccctacc ttctgccaga ggttcccgga ggagtagtga tcctttgggg
1651 gtgattcata gctaggaaag gtcggagagt tgggaggagg ccaactgggg
1701 gaggtgctag gagcaccaga tgcagcagag caaaaaatcc gggtttcatc
1751 gcctggtgcg ggcgctcaat gctgctaaca cgttcctgaa ggaagaaagg
1801 tttcggtcga tggagacctt aacccgccc