Sequence of DPV Pelargonium flower break virus
Pelargonium flower break virus isolate SP25 clone 1 putative movement protein (p7), putative movement protein (p12), and coat protein (CP) genes, complete cds.
ACC No: DQ443018
Dated: 2006-08-01 | Length: 1828 | CRC: 500904264
ID DQ443018; SV 1; linear; genomic RNA; STD; VRL; 1828 BP. XX AC DQ443018; XX DT 06-APR-2006 (Rel. 87, Created) DT 01-AUG-2006 (Rel. 88, Last updated, Version 2) XX DE Pelargonium flower break virus isolate SP25 clone 1 putative movement DE protein (p7), putative movement protein (p12), and coat protein (CP) genes, DE complete cds. XX KW . XX OS Pelargonium flower break virus OC Viruses; ssRNA positive-strand viruses, no DNA stage; Tombusviridae; OC Carmovirus. XX RN [1] RP 1-1828 RX PUBMED; 16873268. RA Rico P., Ivars P., Elena S.F., Hernandez C.; RT "Insights into the selective pressures restricting pelargonium flower break RT virus genome variability: evidence for host adaptation"; RL J. Virol. 80(16):8124-8132(2006). XX RN [2] RP 1-1828 RA Rico P., Ivars P., Elena S.F., Hernandez C.; RT ; RL Submitted (06-MAR-2006) to the EMBL/GenBank/DDBJ databases. RL Biologia del estres, Instituto de Biologia Molecular y Celular de Plantas, RL Avda. de los Naranjos s/n, Valencia, Valencia 46022, Spain XX FH Key Location/Qualifiers FH FT source 1. .1828 FT /organism="Pelargonium flower break virus" FT /specific_host="Pelargonium" FT /isolate="SP25" FT /mol_type="genomic RNA" FT /country="Spain" FT /clone="1" FT /db_xref="taxon:35291" FT gene 193. .399 FT /gene="p7" FT CDS 193. .399 FT /codon_start=1 FT /gene="p7" FT /product="putative movement protein" FT /db_xref="GOA:Q70WT9" FT /db_xref="InterPro:IPR007982" FT /db_xref="UniProtKB/TrEMBL:Q70WT9" FT /protein_id="ABD93256.1" FT /translation="MASKVIVPDLGSDNEIDVSVGGRGNRGKQKGKISVAKDAVSKRTS FT DGGNGGSWVVVAETVSVNIHFNF" FT gene 233. .553 FT /gene="p12" FT CDS 233. .553 FT /codon_start=1 FT /gene="p12" FT /product="putative movement protein" FT /db_xref="UniProtKB/TrEMBL:Q1PGE5" FT /protein_id="ABD93257.1" FT /translation="MRLTCQWEDVGIGENRRVRYPSQRTLSPNGHLMVVMGVLGLLWLR FT PFRSIYTSTFSMPPLINLQHILNLTLLSLILSSFILAERVTHNQYSNDNSKAQYIRIST FT GQ" FT gene 555. .1592 FT /gene="CP" FT CDS 555. .1592 FT /codon_start=1 FT /gene="CP" FT /product="coat protein" FT /db_xref="GOA:Q1PGJ8" FT /db_xref="UniProtKB/TrEMBL:Q1PGJ8" FT /protein_id="ABD93258.1" FT /translation="MDAYKNDPIVRQAVAKGVAWAVKLNTRGWSSLTTQQKKAARSALS FT VIQSPAVVVPRRTRVPNPVPAGLKSGNGKAGKSSTLTRSEFICNVSSTTGVTPTFQSWT FT INPREVKSFPQSSVCSVGYNKYRITDFRIRFSTSCSDTMNGKVAIGFTPDSSDPVPVDK FT SQLYGMQVYADTPAKESVTLKTAADNTIRFLRDSSSDDAKLVDYGRVVLATYGFDSTAP FT SVIGELFFEYTVVYLDPTYVVALTQHGTLTTSSGPPYATLTTTATSTSMELSTHGKWLV FT IWVSADEVINSPVISGSGASGSVTVVSDAQTTVVAVVTANLPGAIISNTSTAAPSSLEW FT YVSRL" XX SQ Sequence 1828 BP; 463 A; 446 C; 485 G; 434 T; 0 other; dq443018 Length: 1828 01-AUG-2006 Type: N Check: 735 .. 1 atcaggaacg tacaggttag cccagaattc ttctcgggcc tatggttcag 51 ttagcgagat ggcgcgtttt agtttcttcc tggcatttgg agttatccca 101 gatgctcaga ttgccttgga ggaacacata agagacatgc ccgtcgcagc 151 cgaatttggg cccgatgaaa gtctggcaga ccacacaatt gaatggcttc 201 taaagtgatc gttcctgatt tgggtagtga taatgagatt gacgtgtcag 251 tgggaggacg tgggaatagg ggaaaacaga agggtaagat atccgtcgca 301 aaggacgctg tctccaaacg gacatctgat ggtggtaatg ggggttcttg 351 ggttgttgtg gctgagaccg tttcggtcaa tatacacttc aacttttagc 401 atgccccctc tgataaacct ccaacacata ttaaatctta ccttgttgtc 451 cctgattcta agttctttca tcttggcaga gagagtaacg cacaatcagt 501 actcaaacga caacagcaaa gcgcaatata tacggatctc aactgggcaa 551 taacatggac gcctacaaga atgacccaat agttaggcag gcagtggcaa 601 agggagtagc ttgggcggtt aagctgaaca ctagagggtg gtcttcattg 651 accacccaac agaagaaagc tgcgcgctca gctctgtctg tgatacaatc 701 cccagcggtg gttgtacctc gcagaaccag agtaccaaac ccagtacccg 751 cgggcctgaa atcagggaat ggcaaggcag ggaaaagctc aactctaacc 801 cgatcggagt ttatctgcaa cgtatcgagc acaaccgggg tgaccccgac 851 ttttcaatca tggaccataa atcctaggga ggtcaaaagt ttcccacaat 901 cttccgtctg ctcggttggc tacaacaagt acaggattac ggacttcagg 951 attaggtttt ctacttcctg ctccgacact atgaatggga aggtagccat 1001 tggcttcact cccgactcta gcgatccggt tcctgttgat aagtcacagc 1051 tgtacgggat gcaggtgtat gccgacactc cagcaaagga gtcggtcacc 1101 ttgaagacgg ctgcagataa cacgattagg ttcctgcggg attcatccag 1151 cgatgatgcc aagctggtgg attatggccg cgtagtttta gccacatacg 1201 gtttcgatag cacagctccg tcagtgatag gagagctgtt cttcgagtac 1251 accgtagttt atctcgaccc tacctatgtc gtggctttaa cacaacatgg 1301 cacgttgacc acctcatctg gccccccata tgctaccttg accaccactg 1351 ccacttcaac atccatggaa ttaagcaccc atggaaagtg gctagtgatt 1401 tgggtctcgg cagacgaggt gattaactct ccggttatat ccgggtccgg 1451 ggcaagcgga tccgtaactg tcgttagcga cgcacagact actgttgttg 1501 cagtggttac cgcaaacttg ccaggcgcca tcatttccaa cacttcaacc 1551 gctgcccctt cgtcactgga gtggtacgta tctaggctat gagagggcag 1601 tcaccctacc ttctgccaga ggttcccgga ggagtagtga tcctttgggg 1651 gtgattcata gctaggaaag gtcggagagt tgggaggagg ccaactgggg 1701 gaggtgctag gagcaccaga ggcagcagag caaaaatccg ggtttcatcg 1751 cctggtgcgg gcgctcaatg ctgctaacaa gttcctgaag gaagaaaggt 1801 tttggtcgat ggagacctta acccgccc