Sequence of DPV Papaya ringspot virus

Papaya ringspot virus isolate BC coat protein gene, partial cds.

ACC No: DQ449532

Dated: 2006-04-16 | Length: 867 | CRC: -1263889709

                
ID   DQ449532   standard; genomic RNA; VRL; 867 BP.
XX
AC   DQ449532;
XX
SV   DQ449532.1
XX
DT   16-APR-2006 (Rel. 87, Created)
DT   16-APR-2006 (Rel. 87, Last updated, Version 1)
XX
DE   Papaya ringspot virus isolate BC coat protein gene, partial cds.
XX
KW   .
XX
OS   Papaya ringspot virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-867
RA   Yang G.-H., Zhang Z.-K.;
RT   ;
RL   Submitted (15-MAR-2006) to the EMBL/GenBank/DDBJ databases.
RL   Biotechnology Institute, Jiao Chang East Road, Kunming, Yunnan 650223,
RL   China
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .867
FT                   /organism="Papaya ringspot virus"
FT                   /specific_host="pumpkin"
FT                   /isolate="BC"
FT                   /mol_type="genomic RNA"
FT                   /isolation_source="whole cell tissue lysate"
FT                   /db_xref="taxon:12205"
FT   CDS             <1. .867
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /protein_id="ABE60875.1"
FT                   /translation="MSKNEAADAGLNEKLKEKEKQKEKEKDKQKDKDNDGASDGNDVST
FT                   STKTGERDRDVNAGTSGTFTVPRIKSFTDKMILPRIKGKTVLNLNHLLQYNPQQIDISN
FT                   TRATQSQFEKWYEGVRNDYGLNDNEMQVMLNGLMVWCIENGTSPDISGVWVMMDGETQV
FT                   DYPIKPLIEHATPPFRQIMAHFSNAAEAYIAKRNATERYMPRYGIKRNLTDISLARYAF
FT                   DFYEVNSKTPDRAREAHMQMKAAALRNTSRRMFGMDGSVSNKEENTERHTVEDVNRDMH
FT                   SLLGMRN"
XX
SQ   Sequence 867 BP; 306 A; 147 C; 209 G; 205 T; 0 other;

dq449532 Length: 867  16-APR-2006  Type: N  Check: 7452  ..

       1  atgtccaaaa atgaagctgc ggatgctggt ttgaatgaga agctcaaaga
      51  aaaagaaaaa cagaaagaaa aagaaaaaga taaacaaaaa gataaagata
     101  atgacggagc tagtgacgga aacgatgtgt cgactagcac aaaaactgga
     151  gagagagata gagatgtcaa tgccgggact agtggaactt tcactgttcc
     201  gaggataaaa tcatttactg ataagatgat tttaccaaga attaagggga
     251  aaactgtcct taatttaaat catcttcttc aatataatcc gcaacaaatt
     301  gacatctcaa acactcgtgc cactcaatct caatttgaaa agtggtatga
     351  gggagtgagg aatgattatg gtctcaatga taacgaaatg caggtaatgt
     401  taaatggttt gatggtttgg tgtatcgaaa atggtacatc tccagacata
     451  tctggtgtct gggtaatgat ggatggggaa acccaagtcg attatcccat
     501  caaacctttg attgaacatg caactcctcc atttaggcag attatggctc
     551  atttcagtaa cgcggcagag gcatacattg cgaagaggaa tgcaactgag
     601  aggtacatgc cgcggtatgg aattaagagg aatttgactg acattagtct
     651  cgctagatat gctttcgatt tctacgaggt gaattcaaag acacctgata
     701  gagctcgtga agctcatatg cagatgaaag ctgcagcgct acgcaatacg
     751  agtcgcagaa tgtttggaat ggacggcagt gtcagtaaca aggaagaaaa
     801  cacggagaga cacacagtgg aagatgtcaa cagagacatg cactctctcc
     851  tgggtatgcg caactaa