Sequence of DPV Narcissus latent virus

Narcissus latent virus polyprotein gene, partial cds.

ACC No: DQ450199

Dated: 2007-08-10 | Length: 1815 | CRC: -61932244

                
ID   DQ450199; SV 1; linear; genomic RNA; STD; VRL; 1815 BP.
XX
AC   DQ450199;
XX
DT   09-APR-2006 (Rel. 87, Created)
DT   10-AUG-2007 (Rel. 92, Last updated, Version 3)
XX
DE   Narcissus latent virus polyprotein gene, partial cds.
XX
KW   .
XX
OS   Narcissus latent virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Macluravirus.
XX
RN   [1]
RP   1-1815
RA   Tomassoli L., Meneghini M.;
RT   "First report of Cucurbit aphid-borne yellows virus in Italy";
RL   Plant Pathol. 56(4):720-720(2007).
XX
RN   [2]
RP   1-1815
RA   Wei T., Pearson M.N., Cohen D.;
RT   ;
RL   Submitted (15-MAR-2006) to the EMBL/GenBank/DDBJ databases.
RL   School of Biological Sciences, The University of Auckland, 3a Symonds
RL   Street, Thomas Building, Auckland 1001, New Zealand
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .1815
FT                   /organism="Narcissus latent virus"
FT                   /specific_host="Iris tingitana"
FT                   /mol_type="genomic RNA"
FT                   /country="New Zealand"
FT                   /db_xref="taxon:48200"
FT   CDS             <1. .1545
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /note="nzNLVl; contains NIb-CP"
FT                   /db_xref="GOA:Q1PCQ7"
FT                   /db_xref="InterPro:IPR001205"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="UniProtKB/TrEMBL:Q1PCQ7"
FT                   /protein_id="ABE03004.1"
FT                   /translation="NSGQPSTVVDNTLVLMLSFYYAYAKKTNDLAFEHIDERFRFVCNG
FT                   DDNKFSVSPEFVAEFGGSFGDEISELGLTYEFDDLTPDIMRNPYMSLTIVQVGDRIGFQ
FT                   LNPERIVGIVQWIKKGGVLHAAQAAFAAMVETFNDPSLFTVMHTYLVWLLVTHKDVLLY
FT                   AQENGLGSVCYMDPCQVFALHYGSSKGLEDVKFDNEDESADEDDGNITPDLELQMDVGN
FT                   LIPEKEKNPQNVNASDGGKNASNSATGESSKPPENNAGKGADQGNVDPPQGDPLVDDEV
FT                   VEWVIPKMSPNIGTSPIPVINGKKLWKRGILKSIPKMMFNTTSTMATQAQLTSWVEEVK
FT                   QVLALKTDDAWTVVITNWCIWCANNGTSPEIDTSQTMEIRDGFGKVQAIPIEVFVDPAV
FT                   ENGGLRKIMRHFSGITHEILKAGKRMTAWGNKRGFTEKSMIPYAFDYYVVTNTTPKTVR
FT                   EQLAQSKAAAIGSGVTRKMVLDGNIQGSHASYERHVDTDNSEYEHGNNVDQRPYLT"
XX
SQ   Sequence 1815 BP; 516 A; 378 C; 456 G; 465 T; 0 other;

dq450199 Length: 1815  10-AUG-2007  Type: N  Check: 4153  ..

       1  aatagtgggc agcccagcac agttgtggac aacactttgg tgctaatgct
      51  gtccttctat tacgcatatg ccaagaaaac caatgacttg gcctttgagc
     101  acatagacga gcgttttcgc tttgtttgca atggcgacga caacaaattc
     151  tcagtgtcgc ctgaatttgt cgccgaattt gggggttcat ttggggatga
     201  gataagtgaa ttaggtctca cttacgagtt tgatgatcta acgccggaca
     251  taatgagaaa tccatacatg agcctgacaa tagttcaagt gggcgaccgc
     301  attggctttc agctcaatcc tgagcgaatc gttgggattg ttcaatggat
     351  caagaagggg ggcgtacttc atgcagccca ggcagcattt gcagcaatgg
     401  ttgaaacatt caacgaccca agtctattca ctgtcatgca cacatatttg
     451  gtgtggctat tggtaactca caaggatgtt ctgctgtacg cacaagagaa
     501  cggtctgggt tcggtttgtt acatggaccc gtgtcaggtg tttgcgttgc
     551  actatggctc ttctaaaggt ttagaagatg tcaagttcga caatgaagat
     601  gagagtgcag atgaggatga cggtaacatt acacccgacc tggaactcca
     651  aatggacgtt ggcaacctca ttcctgagaa ggagaagaat ccccaaaatg
     701  tgaatgcaag tgatggaggt aagaacgcca gcaactctgc cacaggcgag
     751  tcaagtaaac ctcctgagaa taacgcaggg aagggcgctg atcaaggtaa
     801  tgtggatcca ccacagggtg accccttagt ggatgatgag gtggttgagt
     851  gggtcattcc aaaaatgagc ccaaacattg gaacttcacc gataccggtc
     901  atcaacggga agaagttgtg gaagcgagga atactgaaga gcatacccaa
     951  aatgatgttc aacacgactt caaccatggc aactcaagcc caactcacct
    1001  catgggtgga agaggtgaag caagtgcttg cgcttaaaac agacgatgca
    1051  tggacggttg tcatcacgaa ttggtgcatt tggtgcgcta acaacggcac
    1101  atcgcccgaa attgatacat cgcaaactat ggagattcgc gatggttttg
    1151  ggaaggttca ggccattccc attgaggttt ttgtggaccc agctgttgaa
    1201  aatggcggtt tacgaaagat aatgaggcat ttctctggca taactcacga
    1251  gattttaaag gctggtaagc gaatgacagc ctggggaaat aagaggggct
    1301  ttactgagaa atcaatgatc ccctacgctt ttgattacta tgttgtcaca
    1351  aacacaacgc ccaagactgt gcgcgagcaa ttggcgcagt cgaaggcagc
    1401  agcaattggt tcaggtgtga cgaggaagat ggttcttgat gggaatatac
    1451  aagggtctca cgccagttac gaacgccatg tcgatacgga caacagcgag
    1501  tacgagcatg gcaataatgt tgatcaaagg ccctatctta cttgaattct
    1551  gcgttcttga acgcttgaat tcaactattt acattcgctc tttataagtt
    1601  ttctcctaag cttatttcct ttttctctct ctcgagcgtt aagggttaaa
    1651  tgggggttta tttgccattg ttcctccaat gccctgaaat ggcaagctca
    1701  ttctagcgat gtctatctgt aaagagtctt aatcgctttc acttaagtct
    1751  gatctggatg atcgactgcg tttaaacgta tcctacgtcg tagaagacaa
    1801  aaaaaaaaaa aaaaa