Sequence of DPV Rice gall dwarf virus
Rice gall dwarf virus isolate GX segment S6, complete sequence.
ACC No: DQ499824
Dated: 2007-08-30 | Length: 1652 | CRC: 1906057914
ID DQ499824; SV 1; linear; genomic RNA; STD; VRL; 1652 BP.
XX
AC DQ499824;
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DT 01-JUN-2007 (Rel. 92, Created)
DT 30-AUG-2007 (Rel. 93, Last updated, Version 2)
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DE Rice gall dwarf virus isolate GX segment S6, complete sequence.
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KW .
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OS Rice gall dwarf virus
OC Viruses; dsRNA viruses; Reoviridae; Phytoreovirus.
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RN [1]
RP 1-1652
RX PUBMED; 17558539.
RA Zhang H.M., Yang J., Xin X., Chen J.P., Adams M.J.;
RT "Molecular characterization of the genome segments S4, S6 and S7 of rice
RT gall dwarf virus";
RL Arch. Virol. 152(9):1593-1602(2007).
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RN [2]
RP 1-1652
RA Zhang H.-M.;
RT ;
RL Submitted (19-APR-2006) to the EMBL/GenBank/DDBJ databases.
RL Zhejiang Provincial Key Laboratory of Plant Virology, Key Laboratory of
RL Animal and Plant Virology, Ministry of Agriculture, Institute of Virology
RL and Biotechnology, Zhejiang Academy of Agricultural Sciences, Shiqiao Road
RL 198#, Hangzhou City, Zhejiang 310021, China
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FH Key Location/Qualifiers
FH
FT source 1. .1652
FT /organism="Rice gall dwarf virus"
FT /segment="S6"
FT /isolate="GX"
FT /mol_type="genomic RNA"
FT /db_xref="taxon:10986"
FT CDS 41. .1576
FT /codon_start=1
FT /product="nonstructural protein"
FT /note="p6"
FT /db_xref="UniProtKB/TrEMBL:A5X2X7"
FT /protein_id="ABF56525.1"
FT /translation="MVKLRDISTIAVSESTHNFEVFSGPEGVSDTVANLKSENVEINVL
FT GHNPGSLNILIDASPHFRDEKALSDCFGPQMGGVVYDSYDRMVMKNGRIENYPDTEIPT
FT LDVTPLNVDRSLTPKQKENRNKCKKLFDHLLLEIQRGKITPGCVDDYFAFMHAAYCVLS
FT KVYLPRFKYKHFEISSRLVTIHECNNNTKPSLFWSNRDDESHDYMTIIQMMVQVFSNAM
FT TKYATSHLINEYHNDLDSPTSDILTKVVDELKDIDIEPATYATIVYLWLTGEDEIEDLD
FT VLAVIFDECRSDGFVDNLLVRMLPPCEGASLTSEAIDTGLIYTRNDGYMVYTASMVEED
FT VNKMEYDRRYGLPLMEFRATNSLVTLRVDYTTKTNKQMKVQLMINKFPKFELMNTDIFS
FT SQYLMLGKNIVIDMIKMTGHMLRGNVQSANLDTQRKLSNLVSSSHPWITRLVANRARDD
FT VHIRFASHMITDLDNLTKREHPKTIFVESLKMLDHFGKSERYELLVYLSAADF"
XX
SQ Sequence 1652 BP; 528 A; 297 C; 368 G; 459 T; 0 other;
dq499824 Length: 1652 30-AUG-2007 Type: N Check: 8163 ..
1 ggtattttct cctgaaaagc atatctcgga ggcgggcgcc atggtgaagc
51 tacgagacat atcaacaata gccgtatctg aaagtaccca caattttgaa
101 gtgttcagtg gacctgaagg agtttccgac actgtcgcaa acctaaagtc
151 cgaaaatgta gagatcaacg ttttagggca caatcctggg tccctaaata
201 tccttattga tgcgtctcct cactttagag acgagaaagc actatccgat
251 tgtttcgggc ctcaaatggg tggggtagtg tacgactcat atgataggat
301 ggttatgaag aatggcagga ttgaaaatta tcctgatact gaaataccca
351 ctttggatgt tacacctcta aatgtagata ggtcgctgac tccaaaacaa
401 aaagagaacc gaaacaaatg taaaaagttg tttgatcatt tgttattaga
451 aattcaacgc ggtaaaatta ctcctggctg cgtagatgat tattttgcat
501 ttatgcatgc cgcttactgc gtactatcaa aagtatattt gccaaggttt
551 aagtataaac attttgaaat ctccagtcgg ctggtgacga ttcatgagtg
601 caacaataat accaaaccgt cattattttg gtcaaataga gatgatgagt
651 ctcatgacta tatgaccatt attcaaatga tggttcaagt gttttcaaac
701 gccatgacaa agtatgcgac atcacatcta atcaatgaat accataacga
751 tttggactcc ccaacgtcag atatcctgac caaggtggta gacgagttga
801 aagatataga cattgaacca gccacttatg ctactatagt atatttgtgg
851 ctaacgggag aggacgagat cgaagatctt gatgttttag ccgtaatatt
901 tgatgaatgc agaagtgatg gcttcgtaga caacttatta gtaaggatgc
951 taccgccatg tgaaggagct agtttaacta gtgaagccat cgatactgga
1001 ttgatttata cgagaaatga tggatatatg gtttacaccg cctctatggt
1051 tgaggaggat gtgaacaaaa tggaatatga tagaaggtat ggactaccgc
1101 taatggaatt ccgtgccacg aattcactgg taacacttcg tgtggattac
1151 acaaccaaga ctaacaagca gatgaaagta caattaatga tcaataaatt
1201 tccaaagttt gagttaatga atacagacat tttctcttca caatatttga
1251 tgcttggtaa aaatattgta attgatatga taaaaatgac tggacatatg
1301 ctacgcggca atgtccaaag tgcaaaccta gacacgcaaa ggaagttatc
1351 aaatctcgta tctagttccc acccatggat tacgagatta gtcgctaata
1401 gggcgcggga tgacgtgcat attagattcg caagccatat gattaccgat
1451 ttggacaatc taaccaaaag agagcatcca aagacaatct tcgtggaatc
1501 actgaagatg ttggatcatt ttggtaaaag tgaaagatat gaattgttgg
1551 tgtacctgag tgcagctgac ttttgatacg tctacgagtc aagtaccccc
1601 gctggatgtg ttagtgcgta cggctggccg ggccgtgtgg agaatgattg
1651 at