Sequence of DPV Soybean mosaic virus

Soybean mosaic virus isolate b coat protein gene, partial cds.

ACC No: DQ517428

Dated: 2006-05-28 | Length: 795 | CRC: -1158192217

                
ID   DQ517428   standard; genomic RNA; VRL; 795 BP.
XX
AC   DQ517428;
XX
SV   DQ517428.1
XX
DT   28-MAY-2006 (Rel. 87, Created)
DT   28-MAY-2006 (Rel. 87, Last updated, Version 1)
XX
DE   Soybean mosaic virus isolate b coat protein gene, partial cds.
XX
KW   .
XX
OS   Soybean mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-795
RA   Wang Y.W.;
RT   ;
RL   Submitted (25-APR-2006) to the EMBL/GenBank/DDBJ databases.
RL   National Center for Soybean Improvement, Nanjing Agricultural University,
RL   Nanjing 210095, China
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .795
FT                   /organism="Soybean mosaic virus"
FT                   /isolate="b"
FT                   /mol_type="genomic RNA"
FT                   /country="China"
FT                   /virion
FT                   /PCR_primers="fwd_seq: atgctcagacaagtgagct, rev_seq:
FT                   ctccctgccattcataaac"
FT                   /db_xref="taxon:12222"
FT   CDS             <1. .>795
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /protein_id="ABF60867.1"
FT                   /translation="SGKEKEGDMDAGKDPKKSTSSSKGAGTSSKDVNVGSKGKVVPRLQ
FT                   KITRKMNLPMVEGKIILSLDHLLEYKPNQVDLFNTRATRTQFEAWYNAVKDEYELDDEQ
FT                   MGVVMNGFMVWCIDNGTSPDANGVWVMMDGEEQIEYPLKPIVENAKPTLRQIMHHFSDA
FT                   AEAYIEMRNSESPYMPRYGLLRNLRDRELARYAFDFYEVTSKTPNRAREAIAQMKAAAL
FT                   SGVNNKLFGLDGNISTNSENTERHTARDVNQNMHTLLGMGPPQ"
XX
SQ   Sequence 795 BP; 262 A; 141 C; 210 G; 182 T; 0 other;

dq517428 Length: 795  28-MAY-2006  Type: N  Check: 4118  ..

       1  tcaggcaagg agaaggaagg agatatggat gcaggtaagg atccaaagaa
      51  aagcaccagt agtagtaagg gagctggcac aagcagcaaa gatgtaaatg
     101  ttggatcaaa gggaaaggtg gttccgcgtt tgcagaagat cacaaggaag
     151  atgaatcttc caatggttga agggaagatc atcctcagtt tggaccactt
     201  gcttgagtac aaacctaatc aggttgattt attcaacact cgagcaacaa
     251  gaacacagtt cgaagcgtgg tacaatgcag ttaaagatga atatgagctt
     301  gacgatgagc agatgggtgt ggttatgaat ggtttcatgg tatggtgcat
     351  tgacaatggc acatctccag atgctaatgg cgtgtgggtg atgatggatg
     401  gagaggaaca gattgaatat ccgctgaaac ccattgtcga aaatgcaaaa
     451  ccaactttga gacaaatcat gcaccatttc tcagatgcag cagaagctta
     501  cattgagatg agaaattctg aaagtccgta tatgcctaga tatggactac
     551  tgaggaattt gagagataga gagctagctc gctatgcttt tgatttctat
     601  gaggttactt ctaaaacacc aaacagggca agggaagcaa tagcgcagat
     651  gaaggctgca gctctctcgg gagttaacaa caagttgttt ggacttgatg
     701  ggaacatctc aaccaactcc gaaaatactg aaaggcacac tgcaagggat
     751  gtgaatcaaa acatgcacac tcttttgggc atgggcccac cgcag