Sequence of DPV Onion yellow dwarf virus

Onion yellow dwarf virus polyprotein gene, partial cds.

ACC No: DQ519034

Dated: 2007-01-01 | Length: 1111 | CRC: 711296833

                
ID   DQ519034; SV 1; linear; genomic RNA; STD; VRL; 1111 BP.
XX
AC   DQ519034;
XX
DT   01-JAN-2007 (Rel. 90, Created)
DT   01-JAN-2007 (Rel. 90, Last updated, Version 1)
XX
DE   Onion yellow dwarf virus polyprotein gene, partial cds.
XX
KW   .
XX
OS   Onion yellow dwarf virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-1111
RA   Arya M., Baranwal V.K., Ahlawat Y.S.;
RT   "Characterization of OYDV infecting garlic in India";
RL   Unpublished.
XX
RN   [2]
RP   1-1111
RA   Arya M., Baranwal V.K., Ahlawat Y.S.;
RT   ;
RL   Submitted (27-APR-2006) to the EMBL/GenBank/DDBJ databases.
RL   Virology Unit, Division of Plant Pathology, Indian Agricultural Research
RL   Institute, Pusa, New Delhi, Delhi 110012, India
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .1111
FT                   /organism="Onion yellow dwarf virus"
FT                   /specific_host="garlic"
FT                   /mol_type="genomic RNA"
FT                   /country="India:Delhi"
FT                   /db_xref="taxon:43130"
FT   CDS             <1. .903
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /note="contains RNA dependent RNA polymerase and coat
FT                   protein"
FT                   /protein_id="ABF69286.1"
FT                   /translation="IAETALKKLFTGADASEAELERYHAMYLELDDQEAVIKEVRYQAG
FT                   EGEDAAAQSSTLKQVTKQKDKDVDAGTTGKFTVPRIKALSDKMRFPKVGKSVVLNAEHL
FT                   LVYKPDQIELYNTRATQQQFENWFVAIKKEYDVNDEQMKIIMNGLMVWCIENGTSPNLS
FT                   GNWTMMDGDEQVEYPLAPVLDNAKPTFRQIMAHFSDAAEAYIEYRNATEKYMPRYGLQR
FT                   NLTELSLARYAFDFYEVTSKTPKRAKEAHVQMKAAAVRGATNRLFGLDGNVNTMEEDTE
FT                   RHTAADVNKNQHTLLGIRM"
FT   3'UTR           904. .1111
XX
SQ   Sequence 1111 BP; 374 A; 202 C; 272 G; 263 T; 0 other;

dq519034 Length: 1111  01-JAN-2007  Type: N  Check: 1829  ..

       1  atagcagaaa cagctcttaa gaaattattc acaggcgccg acgcaagcga
      51  agctgaatta gaacgatacc acgcaatgta tctggaactt gacgatcaag
     101  aagcggttat aaaggaggtt cgttaccaag cgggagaagg agaggacgca
     151  gcagcacaat caagtacatt gaaacaagtt acgaaacaaa aggacaaaga
     201  cgtcgatgcg ggtacaactg gaaaatttac agtgcctagg atcaaagcat
     251  tgtcggataa aatgcgattt ccaaaagttg gtaaaagtgt agttcttaac
     301  gcagagcact tactggtata caagccggat caaattgaat tatacaacac
     351  acgcgcaaca cagcaacaat ttgaaaattg gtttgtcgca attaaaaagg
     401  agtacgacgt gaacgatgag caaatgaaaa taataatgaa cgggttgatg
     451  gtttggtgta ttgagaacgg cacatctccg aatttatcag gtaattggac
     501  tatgatggat ggcgatgagc aagttgagta ccccttggca ccagttctag
     551  ataacgcaaa gccaacgttt agacaaataa tggcacattt cagtgacgca
     601  gctgaagcgt acattgaata tagaaatgcc actgaaaaat acatgccccg
     651  gtacggactt cagcgaaact taacagaatt gagtttggca cgttacgcat
     701  tcgattttta cgaggtgact tcaaaaactc ctaagcgagc gaaggaagct
     751  catgtgcaaa tgaaggcggc agcggttaga ggggcaacta atcgtttgtt
     801  tggcctggat ggtaacgtca acaccatgga agaggacacg gaaaggcata
     851  cagcagccga tgtaaacaag aaccagcaca cgttgcttgg tattaggatg
     901  taaatgttgt gctgatgcct ttagtcttat atactagtat aagaacgtat
     951  gtaatatgta atccttttca tttcgtttaa cctgacttcg agcagcgaaa
    1001  cgtggtgtac cactagttgt ggcgaacgat atggttaaat atctgtgatc
    1051  aatgtcgaac ttcatgagag tgacgtatca cgaggtgaat cttggcgtga
    1101  attacagaga c