Sequence of DPV Shallot latent virus

Garlic latent virus clone GLV-K12 coat protein gene, complete cds.

ACC No: DQ520093

Dated: 2006-05-29 | Length: 894 | CRC: 886267460

                
ID   DQ520093   standard; genomic RNA; VRL; 894 BP.
XX
AC   DQ520093;
XX
SV   DQ520093.1
XX
DT   29-MAY-2006 (Rel. 87, Created)
DT   29-MAY-2006 (Rel. 87, Last updated, Version 1)
XX
DE   Garlic latent virus clone GLV-K12 coat protein gene, complete cds.
XX
KW   .
XX
OS   Garlic latent virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Flexiviridae;
OC   Carlavirus.
XX
RN   [1]
RP   1-894
RA   Chung B.N.;
RT   "Growth damages of garlic plant caused by Garlic latent virus";
RL   Unpublished.
XX
RN   [2]
RP   1-894
RA   Chung B.N.;
RT   ;
RL   Submitted (28-APR-2006) to the EMBL/GenBank/DDBJ databases.
RL   Horticultural Environment Division, National Horticultural Research
RL   Institute, 540 Top-dong, Kwon-sun Gu, Suwon, Kyeonggi 441-440, South Korea
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .894
FT                   /organism="Garlic latent virus"
FT                   /specific_host="garlic"
FT                   /mol_type="genomic RNA"
FT                   /country="South Korea"
FT                   /clone="GLV-K12"
FT                   /db_xref="taxon:12458"
FT   CDS             1. .894
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /protein_id="ABF68018.1"
FT                   /translation="MTNEEEELNRVKNLPTRDPGTAPDGERSKAVNDVGVMEREGFEAV
FT                   LRRSESRFNKLKEKCIAELSSINVTNCGWESGRPKAQLADSLKGDASNIFTRPSMDALL
FT                   VRNYAPESNNLATAEELAKISAKVQALGAPEECLAEVFWDICMYCTTAGSSPNVNPKGT
FT                   ISVGGKVVTRDMVVAVIKEYSTLRQVCRCYAPVVWNYMLLNEQPPANWDAKGFTENTKY
FT                   AAFDTFDAVTNKAAIQPLEGLIRAPTDAERIAFATHKKLALAKNSQNSLYANTSAEVTG
FT                   GFFGCFPKNNFREDRC"
XX
SQ   Sequence 894 BP; 253 A; 197 C; 237 G; 207 T; 0 other;

dq520093 Length: 894  29-MAY-2006  Type: N  Check: 1186  ..

       1  atgacgaacg aagaagaaga actcaacaga gtgaagaatt tgcccacgcg
      51  cgacccgggg acagcacctg atggggaacg cagtaaggcc gttaatgatg
     101  ttggtgtcat ggaacgcgaa ggctttgagg ccgttcttcg taggagtgaa
     151  agtagattca acaagcttaa agagaagtgc atagctgaat tgtctagcat
     201  aaatgtgacg aattgtggat gggaatccgg acgccccaaa gcacagcttg
     251  ccgatagtct taaaggggat gcgtcaaata ttttcactcg accctctatg
     301  gatgcacttt tggtacggaa ctacgcacct gaaagcaata atctggcaac
     351  tgctgaagaa ttggcgaaaa tatccgccaa ggtacaggct ctaggtgcac
     401  cggaagagtg tctagctgaa gtgttctggg acatttgcat gtattgcact
     451  acagccggga gttcgccaaa tgtgaaccct aaagggacca tctctgtcgg
     501  tggtaaggtt gtgactaggg acatggtagt cgccgtcatt aaggagtact
     551  caacgctgcg acaggtctgc cgttgttacg cgcccgttgt ctggaattac
     601  atgttattga atgagcaacc gcccgctaat tgggacgcaa aggggtttac
     651  tgaaaacact aaatatgctg cttttgatac cttcgatgcg gtgacgaaca
     701  aggctgcaat ccaaccgctg gaaggcctga taagggcccc gactgatgct
     751  gaacgcattg ctttcgcaac acataagaag ttagcccttg caaagaattc
     801  acaaaattcc ctatacgcca acacctccgc tgaggtcact ggaggattct
     851  tcggatgctt tcctaaaaac aatttcagag aggatcgatg ttga