Sequence of DPV Tomato spotted wilt virus

Tomato spotted wilt virus isolate NC-32 clone 2 nucleocapsid (N) gene, complete cds.

ACC No: DQ777105

Dated: 2008-12-16 | Length: 774 | CRC: -332409761

                
ID   DQ777105; SV 1; linear; viral cRNA; STD; VRL; 774 BP.
XX
AC   DQ777105;
XX
DT   01-AUG-2006 (Rel. 88, Created)
DT   16-DEC-2008 (Rel. 98, Last updated, Version 2)
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DE   Tomato spotted wilt virus isolate NC-32 clone 2 nucleocapsid (N) gene,
DE   complete cds.
XX
KW   .
XX
OS   Tomato spotted wilt virus
OC   Viruses; ssRNA negative-strand viruses; Bunyaviridae; Tospovirus.
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RN   [1]
RP   1-774
RA   Tsompana M., Carbone I., Abad J., Moyer J.W.;
RT   "Recombination, genetic drift and mutation in the genesis and evolution of
RT   tomato spotted wilt virus";
RL   Unpublished.
XX
RN   [2]
RP   1-774
RA   Tsompana M., Carbone I., Abad J., Moyer J.W.;
RT   ;
RL   Submitted (12-JUN-2006) to the EMBL/GenBank/DDBJ databases.
RL   Plant Pathology, North Carolina State University, 2518 Gardner Hall, Box
RL   7616, Raleigh, NC 27695-7616, USA
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FH   Key             Location/Qualifiers
FH
FT   source          1. .774
FT                   /organism="Tomato spotted wilt virus"
FT                   /isolate="NC-32"
FT                   /mol_type="viral cRNA"
FT                   /collection_date="2002"
FT                   /clone="2"
FT                   /db_xref="taxon:11613"
FT   gene            1. .774
FT                   /gene="N"
FT   CDS             1. .774
FT                   /codon_start=1
FT                   /gene="N"
FT                   /product="nucleocapsid"
FT                   /protein_id="ABG89876.1"
FT                   /translation="MSKVKLTKESIVALLTQGKDLEFEEDQNLVAFNFKTFCLGNLDQI
FT                   KKMSIISCLTFLKNRQSIMKVIKQSDFTFGKITIKKTSDRIGATDMTFRRLDSLIRVRL
FT                   VEETGNSENLNTIKSKIASHPLIQAYGLPLDDAKSVRLAIMLGGSLPLIASVDSFEMIS
FT                   VVLAIYQDAKYKDLGIDPKKYDTREALGKVCTVLKSKAFEMTDQVKKGKEYAAILSSSN
FT                   PNAKGSVAMEHYSETLNKFYEMFGVKKQAKLAELA"
XX
SQ   Sequence 774 BP; 250 A; 133 C; 175 G; 216 T; 0 other;

dq777105 Length: 774  16-DEC-2008  Type: N  Check: 4647  ..

       1  atgtctaagg ttaagctcac taaggaaagc attgttgctt tgttgacaca
      51  aggcaaagac cttgagtttg aggaagatca gaatctggta gcattcaact
     101  tcaagacttt ttgtctggga aaccttgacc agatcaaaaa gatgagcatt
     151  atttcatgtc tgacattctt gaagaatcgt cagagcataa tgaaggttat
     201  taagcaaagt gattttactt ttggtaaaat taccataaag aaaacttcag
     251  acaggattgg agccactgac atgaccttca gaaggcttga tagcttgatc
     301  agggtcaggc ttgttgagga aactgggaat tctgagaatc tcaatactat
     351  caaatctaag attgcttccc accctttgat tcaagcctat ggattacccc
     401  ttgatgatgc aaagtctgtg aggcttgcca taatgctagg aggtagctta
     451  cctcttattg cttcagttga tagctttgag atgatcagtg ttgtcttagc
     501  tatatatcaa gatgcaaaat acaaggacct tgggatcgac ccaaagaagt
     551  atgacaccag ggaagcctta gggaaagttt gcactgtgct gaaaagcaaa
     601  gcatttgaaa tgactgatca ggtgaagaag gggaaagagt atgctgccat
     651  acttagttcc agcaatccta atgctaaagg aagtgttgct atggaacatt
     701  acagtgaaac tcttaacaag ttctatgaaa tgtttggggt taaaaaacag
     751  gcaaaactcg cagaacttgc ttga