Sequence of DPV Tomato spotted wilt virus

Tomato spotted wilt virus isolate NC-19 clone 40 nucleocapsid (N) gene, complete cds.

ACC No: DQ777176

Dated: 2008-12-16 | Length: 777 | CRC: -646169583

                
ID   DQ777176; SV 1; linear; viral cRNA; STD; VRL; 777 BP.
XX
AC   DQ777176;
XX
DT   01-AUG-2006 (Rel. 88, Created)
DT   16-DEC-2008 (Rel. 98, Last updated, Version 2)
XX
DE   Tomato spotted wilt virus isolate NC-19 clone 40 nucleocapsid (N) gene,
DE   complete cds.
XX
KW   .
XX
OS   Tomato spotted wilt virus
OC   Viruses; ssRNA negative-strand viruses; Bunyaviridae; Tospovirus.
XX
RN   [1]
RP   1-777
RA   Tsompana M., Carbone I., Abad J., Moyer J.W.;
RT   "Recombination, genetic drift and mutation in the genesis and evolution of
RT   tomato spotted wilt virus";
RL   Unpublished.
XX
RN   [2]
RP   1-777
RA   Tsompana M., Carbone I., Abad J., Moyer J.W.;
RT   ;
RL   Submitted (12-JUN-2006) to the EMBL/GenBank/DDBJ databases.
RL   Plant Pathology, North Carolina State University, 2518 Gardner Hall, Box
RL   7616, Raleigh, NC 27695-7616, USA
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .777
FT                   /organism="Tomato spotted wilt virus"
FT                   /isolate="NC-19"
FT                   /mol_type="viral cRNA"
FT                   /collection_date="2002"
FT                   /clone="40"
FT                   /db_xref="taxon:11613"
FT   gene            1. .777
FT                   /gene="N"
FT   CDS             1. .777
FT                   /codon_start=1
FT                   /gene="N"
FT                   /product="nucleocapsid"
FT                   /protein_id="ABG89945.1"
FT                   /translation="MSKVKLTKESIVALLTQGKDLEFEEDQNLVAFNFKTFCLGNLDQI
FT                   KKMSIISCLTFLKNRQSIMKVIKQSDFTFGKITIKKTSDRIGATDVTFRRLDSLIRVRL
FT                   VEETGNSENLNTIKSKIASHPLIQAYGLPLDDAKSVRLAIMLGGSLPLIASVDSFEMIS
FT                   VVLVIYQDAKYKDLGIDPKKYDTREALGKVCTVLKSKAFEMAEDQVKKGKEYAAILSSS
FT                   NPNAKGSVAMEHYSETLNKFYEMFGVKKQAKLAELA"
XX
SQ   Sequence 777 BP; 248 A; 132 C; 180 G; 217 T; 0 other;

dq777176 Length: 777  16-DEC-2008  Type: N  Check: 1810  ..

       1  atgtctaagg ttaagctcac taaggaaagc attgttgctt tgttgacaca
      51  aggcaaagac cttgagtttg aggaagatca gaatctggta gcattcaact
     101  tcaagacttt ttgtctggga aaccttgacc agatcaaaaa gatgagcatt
     151  atttcatgtc tgacattcct gaagaatcgt cagagcataa tgaaggttat
     201  taagcaaagt gattttactt ttggtaaaat taccataaag aaaacttcag
     251  acaggattgg agccactgac gtgaccttca gaaggcttga tagcttgatc
     301  agggtcaggc ttgttgagga aactgggaat tctgagaatc tcaatactat
     351  caaatctaag attgcttccc accctttgat tcaagcctat ggattacccc
     401  ttgatgatgc aaagtctgtg aggcttgcca taatgctggg aggtagctta
     451  cctcttattg cttcagttga tagctttgag atgatcagtg ttgtcttggt
     501  tatatatcaa gatgcaaaat acaaggacct tgggatcgac ccaaagaagt
     551  atgacaccag ggaagcctta gggaaagttt gcactgtgct gaaaagcaaa
     601  gcatttgaaa tggctgaaga tcaggtgaag aaggggaaag agtatgctgc
     651  tatacttagt tccagcaatc ctaatgctaa aggaagtgtt gctatggaac
     701  attacagtga aactcttaac aagttctatg aaatgtttgg ggttaaaaaa
     751  caggcaaaac tcgcagaact tgcttga