Sequence of DPV Chilli veinal mottle virus
Chilli veinal mottle virus isolate P3380 polyprotein gene, partial cds.
ACC No: DQ854943
Dated: 2008-05-20 | Length: 1247 | CRC: -1768312436
ID DQ854943; SV 1; linear; genomic RNA; STD; VRL; 1247 BP.
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AC DQ854943;
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DT 17-AUG-2006 (Rel. 88, Created)
DT 20-MAY-2008 (Rel. 95, Last updated, Version 3)
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DE Chilli veinal mottle virus isolate P3380 polyprotein gene, partial cds.
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KW .
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OS Chilli veinal mottle virus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC Potyvirus.
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RN [1]
RP 1-1247
RA Tsai W.S., Huang Y.C., Zhang D.Y., Reddy K., Hidayat S.H., Srithongchai W.,
RA Green S.K., Jan F.J.;
RT "Molecular characterization of the CP gene and 3'UTR of Chilli veinal
RT mottle virus from South and Southeast Asia";
RL Plant Pathol. 57(3):408-416(2008).
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RN [2]
RP 1-1247
RA Tsai W.S., Green S.K., Huang Y.C., Zhang D., Reddy K., Hidayat S.H.,
RA Srithongchai W.;
RT ;
RL Submitted (15-JUL-2006) to the EMBL/GenBank/DDBJ databases.
RL Virology unit, AVRDC-The World Vegetable Center, P.O. Box 42, Shanhua,
RL Tainan, Taiwan 74199, R. O. C.
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FH Key Location/Qualifiers
FH
FT source 1. .1247
FT /organism="Chilli veinal mottle virus"
FT /isolate="P3380"
FT /mol_type="genomic RNA"
FT /country="Taiwan:Shanhua, Tainan"
FT /isolation_source="pepper"
FT /collection_date="1995"
FT /db_xref="taxon:52280"
FT CDS <1. .962
FT /codon_start=3
FT /product="polyprotein"
FT /note="contains coat protein"
FT /db_xref="GOA:Q0MS28"
FT /db_xref="InterPro:IPR001592"
FT /db_xref="UniProtKB/TrEMBL:Q0MS28"
FT /protein_id="ABH12118.1"
FT /translation="HGESDISPYLRALIEGAKEEGLDDEGGEVAHQSGESVDAGRVKGE
FT DSSSKPADKQTTEKKNKMGGQAQSHVRQSEMEVPQVRDRDVNVGTSGTFTIPRLKGISS
FT KLTIPKIKTKAVVNLEHLLDYAPEQIHLSNTRALQSQFASWYEGVKNDYDVTDEQMQII
FT LNGLMVWCIENGTSPNINGYWVMMDGDEQVEYPIKPLIDHAKPSFRQIMAHFSNLAEAY
FT IEKRNSEKPYMPRYGLQRNLTDMSLARYAFDFYEMTSKTPVRAREAHIQMKAAALRGVN
FT NRMFGLDGRVGTQEEDTERHTAEDVNRNMHNLLGVRGL"
XX
SQ Sequence 1247 BP; 396 A; 221 C; 297 G; 333 T; 0 other;
dq854943 Length: 1247 20-MAY-2008 Type: N Check: 7716 ..
1 agcatggaga gagtgacatt agtccatatt tgagagcact cattgaaggg
51 gccaaggaag aaggattaga tgacgagggt ggggaggttg cccatcagtc
101 gggagagagt gttgatgctg gaagagttaa gggtgaagac tcatcgagta
151 aaccagccga caaacaaaca acagagaaga agaataagat gggtggacaa
201 gctcagtcac atgttcgcca aagtgagatg gaagtacccc aagttcgaga
251 cagagacgtt aatgttggaa cctcgggaac attcacaata ccacgtctta
301 aaggtatttc ttcgaagtta acaataccaa aaatcaaaac aaaggctgtt
351 gttaatcttg aacaccttct tgattatgcc cctgaacaaa tacatttgag
401 taatacaagg gcattacaat cacagtttgc atcctggtat gaaggtgtca
451 agaatgacta tgatgtcaca gatgaacaga tgcaaataat attaaacgga
501 ttgatggttt ggtgtattga gaatgggacg tcaccaaaca ttaatggtta
551 ttgggttatg atggatggag atgagcaagt tgagtatccg ataaaaccat
601 taattgatca tgctaaacca tcatttagac aaatcatggc acactttagc
651 aaccttgctg aagcgtacat tgagaagcgc aactctgaga agccatatat
701 gccaagatat gggcttcaaa gaaaccttac cgatatgtca ttagcgcgat
751 atgctttcga tttctatgaa atgacatcga aaactcccgt tcgagctcga
801 gaagcacaca ttcagatgaa ggcagccgca ttacgtggtg tcaacaacag
851 gatgttcgga ctggacggta gggtaggaac acaggaggag gacaccgaac
901 gccacacagc agaggatgtg aatagaaata tgcacaactt gctgggtgtt
951 cgtggattgt aacatcttca gcttttaact agtaataagt aacatattgt
1001 agtatatgta acttggttta tgttatcgat catgcatatt cttcagtgtg
1051 gttcccacca taagttatgt atgcttggtt tcatactact ttatatatat
1101 gttatttagt actctttatc taggtaactg tgtacccccg cccattctag
1151 cgtggttccc accttaatag aatggagcaa caaagactat tgttatggtt
1201 tatggaggtg actctgtggg tcggtaaact gttcaatagt tggcgtt