Sequence of DPV Chilli veinal mottle virus
Chilli veinal mottle virus isolate Pataruman polyprotein gene, partial cds.
ACC No: DQ854961
Dated: 2008-05-20 | Length: 1476 | CRC: 1494829812
ID DQ854961; SV 1; linear; genomic RNA; STD; VRL; 1476 BP.
XX
AC DQ854961;
XX
DT 17-AUG-2006 (Rel. 88, Created)
DT 20-MAY-2008 (Rel. 95, Last updated, Version 3)
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DE Chilli veinal mottle virus isolate Pataruman polyprotein gene, partial cds.
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KW .
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OS Chilli veinal mottle virus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC Potyvirus.
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RN [1]
RP 1-1476
RA Tsai W.S., Huang Y.C., Zhang D.Y., Reddy K., Hidayat S.H., Srithongchai W.,
RA Green S.K., Jan F.J.;
RT "Molecular characterization of the CP gene and 3'UTR of Chilli veinal
RT mottle virus from South and Southeast Asia";
RL Plant Pathol. 57(3):408-416(2008).
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RN [2]
RP 1-1476
RA Tsai W.S., Green S.K., Huang Y.C., Zhang D., Reddy K., Hidayat S.H.,
RA Srithongchai W.;
RT ;
RL Submitted (15-JUL-2006) to the EMBL/GenBank/DDBJ databases.
RL Virology unit, AVRDC-The World Vegetable Center, P.O. Box 42, Shanhua,
RL Tainan, Taiwan 74199, R. O. C.
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FH Key Location/Qualifiers
FH
FT source 1. .1476
FT /organism="Chilli veinal mottle virus"
FT /isolate="Pataruman"
FT /mol_type="genomic RNA"
FT /country="Indonesia:Pataruman"
FT /db_xref="taxon:52280"
FT CDS <1. .1187
FT /codon_start=3
FT /product="polyprotein"
FT /note="contains coat protein"
FT /db_xref="GOA:Q0MS10"
FT /db_xref="InterPro:IPR001205"
FT /db_xref="InterPro:IPR001592"
FT /db_xref="UniProtKB/TrEMBL:Q0MS10"
FT /protein_id="ABH12136.1"
FT /translation="PERIVSILEWDRAEQPEHRLEAICASMIEAWGYKELLHEIRLFYK
FT WVIEQAPYSQLVSEGKAPYISETALRCLYMSEHGKSDISLYLRALIEGARREELDDEGG
FT EVTHQSGESVDAGRVKGEDSSNKSADKQATDKKSKVQAQPQTRQSEMEVPQVRDRDVNV
FT GTSGTFTIPRLKGISSKLTIPKIKTKAVVNLEHLLDYAPEQIHLSNTRALQSQFASWYE
FT GVKNDYDVTDEQMQIILNGLMVWCIENGTSPNINGYWVMMDGDEQVEYPIKPLIDHAKP
FT SFRQIMAHFSNLAEAYIEKRNSEKPYMPRYGLQRNLTDMSLARYAFDFYEMTSKTPVRA
FT REAHIQMKAAALRGASNRMFGLDGRVSTQEEDTERHTAEDVNRNMHNLLGVRGL"
FT 3'UTR 1188. .1476
XX
SQ Sequence 1476 BP; 472 A; 257 C; 340 G; 407 T; 0 other;
dq854961 Length: 1476 20-MAY-2008 Type: N Check: 182 ..
1 aacctgagcg tatagtttca attctagaat gggatagggc tgaacaacca
51 gaacaccgac ttgaagccat ttgtgcatct atgattgaag cgtggggtta
101 caaggaactt ttacatgaga taaggctttt ctataagtgg gtgattgaac
151 aagcaccata ctcacaactt gtttctgagg gaaaagcacc atacatttca
201 gaaacagcat tgagatgcct ctacatgagt gaacatggaa aaagtgatat
251 cagcctatat ctgagagcac ttattgaagg agctaggagg gaagaattag
301 atgatgaggg tggagaagtt acccatcagt cgggagagag tgttgatgct
351 ggaagagtaa aaggtgaaga ttcttcaaac aagtcagctg ataaacaagc
401 cacagataag aagagcaagg tacaagctca accacaaact cgtcagagcg
451 aaatggaagt acctcaagtt cgggacagag atgttaatgt tggaacctca
501 gggacattca caataccgcg tctcaagggt atttcttcga agttaacaat
551 accaaagatt aaaacaaagg ctgttgttaa ccttgaacac cttcttgatt
601 atgctcctga gcaaatacat ttgagtaata caagggcatt acaatcacaa
651 tttgcatcct ggtatgaagg tgttaagaat gactatgatg tcacagatga
701 acagatgcaa ataatactga atggattgat ggtttggtgt attgagaatg
751 gaacgtcacc aaacataaat ggttattggg ttatgatgga tggagatgaa
801 caagttgaat atccaataaa gccattgatt gatcatgcca aaccatcatt
851 tagacaaatc atggcgcatt ttagcaatct tgctgaagcg tatattgaga
901 agcgcaattc tgagaagcct tatatgccaa gatatgggct tcaacgaaac
951 cttaccgata tgtcattagc gcgatatgct ttcgatttct atgaaatgac
1001 atcgaaaact cccgttcgag ctcgtgaagc acacattcaa atgaaagcag
1051 ctgcattacg tggtgctagc aacaggatgt tcggactgga cggtagggta
1101 agcacacagg aagaggacac tgaacgacat acagcagagg atgtaaatag
1151 aaatatgcac aacctgttgg gcgttcgggg attgtgatcc gcttcaactt
1201 ttaactagta gtgaacaata tattgtagta tatgtaactt ggtttatgtt
1251 atcaatcatg catagtcttc agtgtggttc ccaccataag ttatgtgtgc
1301 ttggtttcat actactttat atatatattg tttagtactc tttatttaag
1351 tagctgtgta tccccgccca ttcagcgtgg tttccacccc tttatggaga
1401 atggtgcaac aaagactatt gttatgattc atgcaggtga ttccgtgaat
1451 cgttggattg ttcaatagtt ggcgtt