Sequence of DPV Tobacco etch virus

Tobacco etch virus isolate Ebony Park CP3 coat protein gene, partial cds.

ACC No: DQ871320

Dated: 2007-09-11 | Length: 789 | CRC: -1550129877

                
ID   DQ871320; SV 1; linear; genomic RNA; STD; VRL; 789 BP.
XX
AC   DQ871320;
XX
DT   03-SEP-2006 (Rel. 89, Created)
DT   11-SEP-2007 (Rel. 93, Last updated, Version 2)
XX
DE   Tobacco etch virus isolate Ebony Park CP3 coat protein gene, partial cds.
XX
KW   .
XX
OS   Tobacco etch virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-789
RA   Spence A., Tolin S.A., McLaughlin W.A.;
RT   "Genetic Characterization of TEV Infecting Scotch Bonnet Pepper in
RT   Jamaica";
RL   Unpublished.
XX
RN   [2]
RP   1-789
RA   Spence A.;
RT   ;
RL   Submitted (31-JUL-2006) to the EMBL/GenBank/DDBJ databases.
RL   Department of Basic Medical Sciences, Biochemistry Section, The University
RL   of the West Indies, Mona, Kingston 7, Jamaica
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .789
FT                   /organism="Tobacco etch virus"
FT                   /isolate="Ebony Park CP3"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12227"
FT   CDS             <1. .>789
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /note="CP"
FT                   /db_xref="GOA:Q0GDX2"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:Q0GDX2"
FT                   /protein_id="ABI34591.1"
FT                   /translation="SGTVDAGADAGKKKDQKDDRVAEQASKDRDVNAGTSGTFSVPRIN
FT                   AMATKLQYPRMKGEVVVNLNHLLGYKPQQIDLSNARATHEQFAAWHQAVMTAYGVNEEQ
FT                   MKILLNGFMVWCIENGTSPNLNGTWVMMDGEEQVSYPLKPMVENAQPTLRQIMTHFSDL
FT                   AEAYIEMRNRERPYMPRYGLQRNITDMSLSRYAFDFYELTSKTPVRAREAHMQMKSCCS
FT                   TKTVELGLFGLDGNVGTAEEDTERHTAHDVNRNMHTLLGVR"
XX
SQ   Sequence 789 BP; 251 A; 149 C; 213 G; 176 T; 0 other;

dq871320 Length: 789  11-SEP-2007  Type: N  Check: 9011  ..

       1  agtggcactg tggatgctgg tgctgacgct ggcaagaaga aagatcaaaa
      51  ggatgataga gtcgctgagc aggcttcaaa ggatagggat gtaaatgctg
     101  gaacttcagg aacattctca gtcccacgaa taaatgctat ggccacaaag
     151  cttcaatatc cgaggatgaa aggggaagtg gttgtaaact tgaatcacct
     201  tttgggatac aagccacagc aaattgattt gtcaaatgct cgagccacac
     251  atgagcagtt tgctgcgtgg catcaggcag tgatgacagc ctatggagta
     301  aatgaagagc aaatgaaaat attgctaaat ggatttatgg tgtggtgcat
     351  agaaaatggg acttccccaa acttgaatgg aacttgggtc atgatggatg
     401  gtgaggagca agtttcatac ccgctgaaac caatggttga aaacgcgcag
     451  ccaacactga ggcagattat gacacacttc agtgacctgg ctgaagcgta
     501  cattgaaatg aggaacaggg aacgaccata tatgcctagg tatggtctac
     551  agagaaacat tacagacatg agtttgtcac gctatgcgtt cgatttctat
     601  gaactaactt cgaaaacacc tgttagagcg agggaggcgc atatgcaaat
     651  gaaaagctgc tgcagtacga aaacagtgga actaggttta tttggtcttg
     701  atggcaacgt gggtaccgca gaggaagaca ctgaacggca cacagcgcat
     751  gatgtgaacc gtaacatgca cacactatta ggggtccgc