Sequence of DPV Cowpea mild mottle virus
Cowpea mild mottle virus isolate Barreiras coat protein (ORF5) and putative nucleic acid binding protein (ORF6) genes, complete cds.
ACC No: DQ885940
Dated: 2007-06-24 | Length: 1313 | CRC: -1029442477
ID DQ885940; SV 1; linear; genomic RNA; STD; VRL; 1313 BP.
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AC DQ885940;
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DT 11-DEC-2006 (Rel. 90, Created)
DT 24-JUN-2007 (Rel. 92, Last updated, Version 2)
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DE Cowpea mild mottle virus isolate Barreiras coat protein (ORF5) and putative
DE nucleic acid binding protein (ORF6) genes, complete cds.
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KW .
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OS Cowpea mild mottle virus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Flexiviridae;
OC Carlavirus.
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RN [1]
RP 1-1313
RA Belintani P., Gaspar J.O., Almeida A.M.R., Kitajima E.W.;
RT "Characterization of the 3'-terminus of Cowpea mild mottle virus isolated
RT from soybean in Brazil";
RL Unpublished.
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RN [2]
RP 1-1313
RA Belintani P., Gaspar J.O., Almeida A.M.R., Kitajima E.W.;
RT ;
RL Submitted (04-AUG-2006) to the EMBL/GenBank/DDBJ databases.
RL Zoologia e Botanica, Instituto de Biociencias, Letras e Ciencias Exatas,
RL Rua Cristovao Colombo 2265, Sao Jose do Rio Preto, SP 15054 000, Brazil
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FH Key Location/Qualifiers
FH
FT source 1. .1313
FT /organism="Cowpea mild mottle virus"
FT /specific_host="soybean"
FT /isolate="Barreiras"
FT /mol_type="genomic RNA"
FT /country="Brazil"
FT /virion
FT /db_xref="taxon:67761"
FT gene 15. .881
FT /gene="ORF5"
FT CDS 15. .881
FT /codon_start=1
FT /gene="ORF5"
FT /product="coat protein"
FT /db_xref="GOA:A1BY90"
FT /db_xref="UniProtKB/TrEMBL:A1BY90"
FT /protein_id="ABL09850.1"
FT /translation="MESVFDLNKLVDSEMAEKAKTGVPKAADGTALPDIDAELQKRLDD
FT LRAFLRKTQSASEITNPGFELGRPALKESTFNSDKHTHIYGKWSIDQLSRIVPKKISNN
FT MATAEEMAKVQITLEGLGVPTEQGAEVLLQVAIYCKDVSSSSFMDSSGTFDWKGGSILS
FT DSVIAALRKDDNTLRRVCRLYAPITWNFMLTHKAPPSDWAAMGFKYDDRFAAFDCFEYV
FT ENPAAIQPAEGLIRKPTPSEKIAHNTYKRLALDRSNRNELYSNLNTEVTGGTLGPEISR
FT NFNHAKK"
FT gene 884. .1231
FT /gene="ORF6"
FT CDS 884. .1231
FT /codon_start=1
FT /gene="ORF6"
FT /product="putative nucleic acid binding protein"
FT /note="11K"
FT /db_xref="GOA:A1BY91"
FT /db_xref="UniProtKB/TrEMBL:A1BY91"
FT /protein_id="ABL09851.1"
FT /translation="MISCKLIAIHVYLVSRSLGYALPFELCVLISVKAGPARLGTGTGT
FT SSYARKRRSKIIGRCHLCYRVNPKFYFTKRCNGVDCKPGLNYPRWVEDFIRYGVYSKGS
FT NRGDTPQILNS"
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SQ Sequence 1313 BP; 388 A; 248 C; 310 G; 367 T; 0 other;
dq885940 Length: 1313 24-JUN-2007 Type: N Check: 7778 ..
1 attactctta ggttatggag tcagtatttg atttgaataa gttggtggat
51 agtgagatgg cagagaaagc aaaaactggc gttccaaagg cagctgatgg
101 tacagctcta cctgatatag atgcggagct gcagaaaaga ttggatgatt
151 tgagagcatt cctgaggaaa actcaaagcg cgtctgagat aaccaatcct
201 ggttttgaac tcgggaggcc tgcattgaag gagtccactt tcaattctga
251 taaacatact cacatctatg gaaagtggtc aattgaccaa ctaagcagaa
301 tagtcccaaa aaagatatca aacaacatgg ccacagctga ggaaatggct
351 aaggttcaga taactctaga aggattagga gtacctactg agcaaggtgc
401 tgaggtcctt ttgcaagttg ccatttactg taaagatgtt agctcctcta
451 gttttatgga ttcaagtggc acttttgact ggaaaggtgg gtctatactc
501 tcagattcag ttattgctgc cctaaggaag gacgacaata ctcttcgtag
551 agtttgtcgg ttatatgctc caataacatg gaatttcatg ctaactcaca
601 aggctccacc ttctgattgg gcagccatgg gcttcaaata cgatgatcga
651 tttgccgcgt ttgattgttt tgagtatgtt gagaaccccg ctgccataca
701 gcctgctgag gggttaataa ggaagccgac acccagtgag aagattgcac
751 acaacacata caaaaggttg gctttggata ggtcaaacag gaatgagctc
801 tattccaatt taaatactga agtaactggg ggtacactag gacctgaaat
851 atcccgcaat tttaaccacg ctaaaaagtg agaatgataa gctgcaaact
901 aattgccatc cacgtgtatc tagttagtag aagtctaggt tatgcattgc
951 catttgagtt gtgtgtttta attagtgtca aagctggtcc cgccaggttg
1001 ggcactggca ctggcacctc ttcctatgca aggaagagga gatccaaaat
1051 aattggtcgt tgtcatctgt gttacagagt caatcccaaa ttctacttta
1101 ccaagcgttg taatggtgtg gattgtaaac ccggtttgaa ttaccctcgt
1151 tgggttgaag attttatacg ctatggcgtt tattctaagg ggagtaaccg
1201 aggtgatacc cctcaaatat taaactcttg aaccaaggaa agagtataaa
1251 gagtgccttg tgcatcttca gacctaactg ttgagatgag aaccggtttt
1301 aaagttattt tcc