Sequence of DPV Hardenbergia mosaic virus

Hardenbergia mosaic virus isolate Med-7 polyprotein gene, partial cds.

ACC No: DQ898201

Dated: 2007-09-11 | Length: 822 | CRC: 869199238

                
ID   DQ898201; SV 1; linear; genomic RNA; STD; VRL; 822 BP.
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AC   DQ898201;
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DT   10-AUG-2007 (Rel. 92, Created)
DT   11-SEP-2007 (Rel. 93, Last updated, Version 2)
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DE   Hardenbergia mosaic virus isolate Med-7 polyprotein gene, partial cds.
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KW   .
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OS   Hardenbergia mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus; unclassified Potyvirus.
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RN   [1]
RP   1-822
RA   Webster C.G., Coutts B.A., Jones R.A.C., Jones M.G.K., Wylie S.J.;
RT   "Virus impact at the interface of an ancient ecosystem and a recent
RT   agroecosystem: studies on three legume-infecting potyviruses in the
RT   southwest Australian floristic region";
RL   Plant Pathol. 56(5):729-742(2007).
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RN   [2]
RP   1-822
RA   Webster C.G., Wylie S.J., Coutts B.A., Jones M.G.K., Jones R.A.C.;
RT   ;
RL   Submitted (13-AUG-2006) to the EMBL/GenBank/DDBJ databases.
RL   WA State Agricultural Biotechnology Centre, Murdoch University, South
RL   Street, Perth, WA 6150, Australia
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FH   Key             Location/Qualifiers
FH
FT   source          1. .822
FT                   /organism="Hardenbergia mosaic virus"
FT                   /specific_host="Hardenbergia comptoniana"
FT                   /isolate="Med-7; Medina 7"
FT                   /mol_type="genomic RNA"
FT                   /country="Australia"
FT                   /virion
FT                   /db_xref="taxon:409486"
FT   CDS             <1. .822
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /note="contains coat protein"
FT                   /protein_id="ABK51604.1"
FT                   /translation="SDTTKKDLDAGLDSEKRKKADGGNKDKGKESTSAGKDKDVDAGSQ
FT                   GKVVPRLQKITKKMNLPMVKGNMILNLDHLIEYKPEQTKLFNTRATDAQFATWFQAVQE
FT                   EYELDDAQMSIVMNGFMVWCIDNGTSPDVNGVWVMMDGDEQVEYPLKPMVENAKPTLRQ
FT                   IMHHFSDAAEAYIEMRCSTGPYMPRYGLLRNLRDRSLARYAFDFYEVNAKTAIRAREAV
FT                   AQMKAAALSNVNTKLFGLDGNIATTSENTERHTAKDVNQNMHSLWGMGAPQ"
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SQ   Sequence 822 BP; 268 A; 147 C; 212 G; 195 T; 0 other;

dq898201 Length: 822  11-SEP-2007  Type: N  Check: 3694  ..

       1  tcagatacaa caaagaagga cctggatgca ggcttagatt cagaaaagag
      51  gaaaaaggct gatggaggca acaaagataa aggcaaagaa agcacttctg
     101  ctggaaaaga caaagatgtg gatgctggtt cgcaagggaa ggtcgtgcca
     151  cgtcttcaga agataacaaa gaaaatgaac cttcctatgg ttaaaggtaa
     201  tatgattttg aaccttgatc atctgattga gtacaaacct gagcaaacca
     251  aactcttcaa tacaagggcg actgatgccc aatttgctac atggtttcaa
     301  gctgttcaag aagaatatga attggacgat gctcaaatga gcattgttat
     351  gaatggcttt atggtgtggt gtattgacaa tggcacctca cctgatgtta
     401  atggagtgtg ggttatgatg gatggtgatg aacaagttga atatccattg
     451  aaaccaatgg tggagaatgc aaagcccaca ctaagacaaa taatgcacca
     501  tttctctgac gcagctgaag cgtacattga gatgaggtgc tcaactggac
     551  catacatgcc taggtatggt cttctgcgca atttgagaga caggagtctg
     601  gcacgttacg cttttgactt ttatgaagtt aatgcaaaga cggcaatacg
     651  tgctagggaa gcagtagcgc agatgaaggc tgcagctctc agcaatgtta
     701  acaccaagtt gtttggcttg gatggtaata ttgcaacaac aagcgagaac
     751  actgaaaggc acactgcgaa ggatgtcaac cagaacatgc attccttgtg
     801  ggggatgggt gcaccgcagt aa