Sequence of DPV Hardenbergia mosaic virus

Hardenbergia mosaic virus isolate Sb-3 polyprotein gene, partial cds.

ACC No: DQ898204

Dated: 2007-09-11 | Length: 825 | CRC: 557902344

                
ID   DQ898204; SV 1; linear; genomic RNA; STD; VRL; 825 BP.
XX
AC   DQ898204;
XX
DT   10-AUG-2007 (Rel. 92, Created)
DT   11-SEP-2007 (Rel. 93, Last updated, Version 2)
XX
DE   Hardenbergia mosaic virus isolate Sb-3 polyprotein gene, partial cds.
XX
KW   .
XX
OS   Hardenbergia mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus; unclassified Potyvirus.
XX
RN   [1]
RP   1-825
RA   Webster C.G., Coutts B.A., Jones R.A.C., Jones M.G.K., Wylie S.J.;
RT   "Virus impact at the interface of an ancient ecosystem and a recent
RT   agroecosystem: studies on three legume-infecting potyviruses in the
RT   southwest Australian floristic region";
RL   Plant Pathol. 56(5):729-742(2007).
XX
RN   [2]
RP   1-825
RA   Webster C.G., Wylie S.J., Coutts B.A., Jones M.G.K., Jones R.A.C.;
RT   ;
RL   Submitted (13-AUG-2006) to the EMBL/GenBank/DDBJ databases.
RL   WA State Agricultural Biotechnology Centre, Murdoch University, South
RL   Street, Perth, WA 6150, Australia
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .825
FT                   /organism="Hardenbergia mosaic virus"
FT                   /specific_host="Hardenbergia comptoniana"
FT                   /isolate="Sb-3; Seabird 3"
FT                   /mol_type="genomic RNA"
FT                   /country="Australia"
FT                   /virion
FT                   /db_xref="taxon:409486"
FT   CDS             <1. .825
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /note="contains coat protein"
FT                   /protein_id="ABK51607.1"
FT                   /translation="SQTDKESLDAGLDGKKDKKATDGGNKDKGKASASVEKDKDVDAGT
FT                   QGKVVPRLQKITKKMNLPMVKGNMILNLDHLIEYKPDQTKLFNTRATDSQFATWFKSVQ
FT                   EEYELDDAQMSIVMNGFMVWCIDNGTSPDVNGVWVMMDGDEQVEYPLKPMVENAKPTLR
FT                   QIMHHFSDAAEAYIEMRCSTGPYMPRYGLLRNLRDRSLARYAFDFYEVNAKTSVRAREA
FT                   VAQMKAAALSNVSTKLFGLDGNVATISENTERHTAKDVNQNMHSLLGMGSPQ"
XX
SQ   Sequence 825 BP; 267 A; 153 C; 218 G; 187 T; 0 other;

dq898204 Length: 825  11-SEP-2007  Type: N  Check: 5533  ..

       1  tcacaaactg ataaggagag cttggatgct ggactggatg gaaagaaaga
      51  caagaaagca actgatggag gcaacaaaga caaaggcaaa gctagtgcct
     101  ctgtagaaaa agacaaagat gtagacgctg gcacgcaggg aaaggttgtg
     151  ccacgtctcc aaaagatcac aaagaagatg aatctcccca tggtcaaggg
     201  taacatgatt ttgaacttgg accacttaat tgaatacaaa cccgatcaaa
     251  caaaactctt caacactagg gcaactgatt ctcagtttgc cacatggttc
     301  aagtctgtac aagaagagta tgaactggat gatgcacaga tgagcattgt
     351  catgaatgga ttcatggtgt ggtgcattga caatggcacc tcaccagatg
     401  taaatggggt ttgggtgatg atggatggcg atgaacaggt tgagtatcca
     451  ttaaagccaa tggtggagaa tgcaaagcct acattgaggc agatcatgca
     501  ccatttctca gacgcagctg aagcgtacat tgagatgagg tgttcaactg
     551  gaccgtacat gcctaggtat ggtctattgc gcaatttgag agacagaagt
     601  ttggcgcggt atgcatttga cttttatgag gttaatgcga aaacatccgt
     651  gcgcgcaaga gaagcagtag cgcaaatgaa agctgcagca ctcagcaatg
     701  ttagcactaa gttgtttggc ttggatggta acgttgcaac aattagcgag
     751  aacactgaaa ggcatactgc gaaagacgtt aaccaaaata tgcattccct
     801  gttggggatg ggttcgccgc agtaa