Sequence of DPV Passion fruit woodiness virus

Passion fruit woodiness virus isolate Car-1 polyprotein gene, partial cds.

ACC No: DQ898216

Dated: 2007-09-11 | Length: 840 | CRC: 162206782

                
ID   DQ898216; SV 1; linear; genomic RNA; STD; VRL; 840 BP.
XX
AC   DQ898216;
XX
DT   10-AUG-2007 (Rel. 92, Created)
DT   11-SEP-2007 (Rel. 93, Last updated, Version 2)
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DE   Passion fruit woodiness virus isolate Car-1 polyprotein gene, partial cds.
XX
KW   .
XX
OS   Passion fruit woodiness virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-840
RA   Webster C.G., Coutts B.A., Jones R.A.C., Jones M.G.K., Wylie S.J.;
RT   "Virus impact at the interface of an ancient ecosystem and a recent
RT   agroecosystem: studies on three legume-infecting potyviruses in the
RT   southwest Australian floristic region";
RL   Plant Pathol. 56(5):729-742(2007).
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RN   [2]
RP   1-840
RA   Webster C.G., Wylie S.J., Coutts B.A., Jones M.G.K., Jones R.A.C.;
RT   ;
RL   Submitted (14-AUG-2006) to the EMBL/GenBank/DDBJ databases.
RL   WA State Agricultural Biotechnology Centre, Murdoch University, South
RL   Street, Perth, WA 6150, Australia
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FH   Key             Location/Qualifiers
FH
FT   source          1. .840
FT                   /organism="Passion fruit woodiness virus"
FT                   /specific_host="Passiflora foetida"
FT                   /isolate="Car-1; Carnarvon 1"
FT                   /mol_type="genomic RNA"
FT                   /country="Australia"
FT                   /virion
FT                   /db_xref="taxon:31732"
FT   CDS             <1. .840
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /note="contains coat protein"
FT                   /protein_id="ABK51619.1"
FT                   /translation="SVSGKKDEIIDAGNDGKKATSKKDTQDAGEASKGKESVSGEKDKD
FT                   VNAGSKGSGVPRLQKITKRMNLPMVKGNMILDLEHLIEYKPDQTKLFNTRATDAQFAAW
FT                   YEGVKSEYELSDNQMGIVVNGFMVWCIDNGTSPDINGVWVMMDGDEQIEYPLKPMVENA
FT                   KSTLRQIMHHFSDAAEAYIEMRCASGPYMPRYGLLRNLRDKNLARYAFDFYEVNAKTSD
FT                   RAREAVAQMKAAALSNVTNKLFGLDGNVTTISEDTERHTARDVNQNMHTLLGMGSPQ"
XX
SQ   Sequence 840 BP; 280 A; 148 C; 219 G; 193 T; 0 other;

dq898216 Length: 840  11-SEP-2007  Type: N  Check: 5450  ..

       1  tctgtctcag gaaagaaaga tgagatcatt gatgctggaa atgatgggaa
      51  gaaagcaaca agcaagaagg acacacagga tgctggtgaa gccagtaaag
     101  gaaaggaaag cgtcagtggt gaaaaggaca aggacgtcaa tgcaggatca
     151  aaaggaagtg gcgtcccaag actgcaaaag atcacaaaga ggatgaacct
     201  cccaatggtc aagggcaata tgattttgga tttggaacac ctcatagaat
     251  acaaaccaga tcagaccaag ctattcaaca caagagcaac tgacgctcaa
     301  tttgcggctt ggtatgaggg agtcaaatct gaatatgaac tgagtgacaa
     351  ccaaatgggg attgttgtga atggctttat ggtttggtgc atagacaatg
     401  gaacttcacc agatataaat ggggtgtggg taatgatgga cggcgatgaa
     451  cagattgaat accctcttaa accaatggtt gagaatgcaa aatccactct
     501  ccgacagatt atgcaccatt tttcggacgc agctgaagcg tatatcgaga
     551  tgagatgtgc aagtgggcca tacatgccta ggtatggact cttgcgcaat
     601  ttgagagaca agaatttggc acgatatgct tttgattttt acgaagttaa
     651  tgctaagact tctgatcgtg ctagggaagc agttgcccaa atgaaagctg
     701  cagctctcag taatgttact aacaagttgt ttggacttga tggtaatgtt
     751  acaacaatta gcgaggacac tgaaaggcac actgcaaggg atgtgaacca
     801  aaacatgcac actttgttgg gcatgggttc accgcagtaa