Sequence of DPV Passion fruit woodiness virus

Passion fruit woodiness virus isolate CoP-1 polyprotein gene, partial cds.

ACC No: DQ898218

Dated: 2007-09-11 | Length: 840 | CRC: -753323753

                
ID   DQ898218; SV 1; linear; genomic RNA; STD; VRL; 840 BP.
XX
AC   DQ898218;
XX
DT   10-AUG-2007 (Rel. 92, Created)
DT   11-SEP-2007 (Rel. 93, Last updated, Version 2)
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DE   Passion fruit woodiness virus isolate CoP-1 polyprotein gene, partial cds.
XX
KW   .
XX
OS   Passion fruit woodiness virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-840
RA   Webster C.G., Coutts B.A., Jones R.A.C., Jones M.G.K., Wylie S.J.;
RT   "Virus impact at the interface of an ancient ecosystem and a recent
RT   agroecosystem: studies on three legume-infecting potyviruses in the
RT   southwest Australian floristic region";
RL   Plant Pathol. 56(5):729-742(2007).
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RN   [2]
RP   1-840
RA   Webster C.G., Wylie S.J., Coutts B.A., Jones M.G.K., Jones R.A.C.;
RT   ;
RL   Submitted (14-AUG-2006) to the EMBL/GenBank/DDBJ databases.
RL   WA State Agricultural Biotechnology Centre, Murdoch University, South
RL   Street, Perth, WA 6150, Australia
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FH   Key             Location/Qualifiers
FH
FT   source          1. .840
FT                   /organism="Passion fruit woodiness virus"
FT                   /specific_host="Passiflora caerulea"
FT                   /isolate="CoP-1; Como 1"
FT                   /mol_type="genomic RNA"
FT                   /country="Australia"
FT                   /virion
FT                   /db_xref="taxon:31732"
FT   CDS             <1. .840
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /note="contains coat protein"
FT                   /protein_id="ABK51621.1"
FT                   /translation="SSSGKKDEIIDAGADGKKVVSKKDTQDAGEVNKGKESVNGEKDKD
FT                   VNAGSKGSGVPRLQKITKKMNLPMVKGNMVLDLDHLIEYKPDQTKLFNTRATDAQFAAW
FT                   YEGVKAEYELNDDQMGVIMNGFMVWCIDNGTSPDINGVWVMMDGDERVEYPLKPMVENA
FT                   KPTLRQIMHHFSDAAEAYIEMRCASGPYMPRYGLLRNLRDKNLARYAFDFYEVNAKTSD
FT                   RAREAVAQMEAAALSNVTNKLFGLDGNVATISEDTERHTARDVNQNMHTLLGMGAPQ"
XX
SQ   Sequence 840 BP; 277 A; 144 C; 223 G; 196 T; 0 other;

dq898218 Length: 840  11-SEP-2007  Type: N  Check: 8381  ..

       1  tctagttcag gaaagaaaga tgagatcatt gatgctggag ctgatgggaa
      51  aaaggtagta agcaagaagg acacacagga tgctggtgaa gtcaataaag
     101  gaaaggaaag cgttaatggt gaaaaggaca aggacgtcaa tgcaggatca
     151  aaaggaagtg gcgtcccaag gttacaaaag atcacaaaga agatgaacct
     201  tccaatggtc aagggcaaca tggtcttaga tttggatcac ctcatagaat
     251  acaaaccaga tcagaccaag ctattcaaca caagagcaac tgacgctcaa
     301  tttgcagctt ggtatgaggg agtcaaagct gagtatgaac ttaatgacga
     351  ccagatgggg gttattatga atggctttat ggtttggtgc atagataatg
     401  gaacatcacc ggatataaat ggagtgtggg taatgatgga tggcgatgaa
     451  cgggttgaat accctctcaa gccaatggtt gagaatgcaa aacccactct
     501  ccgacagatt atgcaccatt tctcggacgc agctgaagcg tatatcgaga
     551  tgagatgtgc aagtggacca tacatgccta ggtatggact cttgcgcaat
     601  ttgagagaca agaatttggc acgatatgct tttgattttt atgaagttaa
     651  tgctaagact tctgatcgtg ctagggaagc agttgcccaa atggaagctg
     701  cagctctcag taatgttact aacaagttgt ttggacttga tggtaatgtt
     751  gcaacaatta gcgaggacac tgaaaggcac actgcaaggg atgtgaacca
     801  aaacatgcac actttgttgg gcatgggtgc accgcagtaa